Pogona vitticeps (central bearded dragon): 110074299
Help
Entry
110074299 CDS
T05000
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110074299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110074299
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110074299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
110074299
NCBI-ProteinID:
XP_020639996
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MRPPLGPFHLDLLKFLLRWSEKVDFIQESSQGTKWFTLKSGWNTFYDNGKQEDGPIPGHG
DSHPLQDVSKENRMVIAEDRELLRQVLPSREEDEDDSDSDDDDIRVTIGNIKTGAPSYMG
TPMNLNLKTGRGYGAPASAKSQPKGIDLEAAGNINGLPVIEVDLESFEDKPWRKPGADLS
DYFNYGFNEETWKAYCEKQRRLQLGLEPSAPVSTENKITVQQGRTGNAEKEPENNVIKMD
FKTDFVALVGGRIKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGE
HGSKLQPSQQGQQPSQPQQPPQQQTFAPPAGPPPPPISGPPPPHFLHPPPPPVTSVPPPL
HTPGLPPPGPLPGLFPPPLAPPPALLIPTLDGQPAGYNNRQPPPFGYNSTDSGFISYPPI
STSHTPWVTTVDKSASAPDGGPWEYSSSRRDRERDRDRTPTTSEYNNDDDRYRYYSRERS
YDFERDYRRSRDRSREREDRHRERRHRDKEEGGKHKSSRRKQHDNEEGETHRRHKHKKNK
RSKEEKEASEDGAPEGNGQDSKE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagaccacccttgggtcctttccatcttgatttacttaaatttctactccgctggtct
gaaaaagtggacttcatccaggaaagctcacaaggaacgaaatggtttactcttaaaagt
ggttggaatactttctatgacaatggtaagcaagaagatggaccgattcctggacatgga
gactcccaccctttgcaagatgtatccaaggagaacaggatggttatcgctgaagaccga
gagctgttgcggcaggtccttccgagcagagaagaggacgaggacgacagcgacagcgat
gatgatgacattcgagttacaatcggcaacatcaagactggagcaccgtcttacatgggc
acccctatgaatctgaatctaaaaacgggtcggggttatggagcacctgcctcagcgaag
tcacagcccaaaggaattgatttagaagctgcaggaaatattaacggcttgcctgtaatc
gaagtggatttagagtcctttgaagacaaaccgtggaggaaaccaggtgctgacctttcc
gactatttcaactacgggttcaacgaagaaacatggaaagcttattgtgaaaagcagcgt
cggcttcaacttggcttggagccatccgcccctgtcagtacagaaaataagatcacggtt
cagcaaggaagaacaggaaatgccgaaaaagagccggagaacaatgtcattaaaatggat
tttaagacggattttgtggccctagtaggtggtcggataaaggccgggcctcccccaaac
aggaagctgggagggacaattgacgtgattggtggtcaggccggcaccatccggagagtc
gaaggaaggcggcgtgacaagcatgcctcggaggagaatcccattcaggttcttggcgag
catgggagcaagttgcaaccctcacaacaaggccagcaaccatcacaaccgcaacagcca
cctcaacagcagacatttgcacccccagcgggcccaccgcctccaccgatcagcggtcct
cctccacctcactttctccatcctccaccacctccggtcacgtccgtcccaccgcctctc
cacactccaggtttgccacccccgggtccccttccagggttgtttcccccacctctggct
ccaccaccagcgcttttgatacccacacttgacggccagcctgccggctacaacaacagg
cagccccctccgtttggttacaactctacagattcaggtttcatcagctaccctcccatt
tctacttcccacacgccctgggtgactacggtggataagagcgccagcgctcctgacggt
ggcccctgggaatactccagctccaggagggaccgggaaagggatcgggaccggacaccc
accaccagtgaatacaacaacgatgatgacaggtaccgttattacagccgggaacgcagt
tatgattttgaacgagactatcgcaggagtagagaccgcagccgtgagcgagaagatcgt
caccgggaacggcggcacagagacaaagaggagggcggcaaacacaaatcgtcacggcgc
aaacagcacgacaacgaagagggggaaacccaccggcgccacaagcacaaaaagaacaag
cgcagcaaggaagagaaggaggcgagtgaggacggggcgcccgagggaaatggacaagat
tccaaggaatag
DBGET
integrated database retrieval system
