Pogona vitticeps (central bearded dragon): 110074803
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Entry
110074803 CDS
T05000
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03015
mRNA surveillance pathway
pvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110074803 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
110074803 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110074803 (PABPC1)
03041 Spliceosome [BR:
pvt03041
]
110074803 (PABPC1)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110074803 (PABPC1)
mRNA cycle factors
Stress granule specific factors
110074803 (PABPC1)
Spliceosome [BR:
pvt03041
]
Complex C
Other components
Complex C specific factors
110074803 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_10
RRM_5
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
110074803
NCBI-ProteinID:
XP_020641069
UniProt:
A0A6J0T4N8
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPTSQLAQLRPGPRWTAQGARPHPFQNMPGAIRPTAPRPPFSTMRPASSQVPRVISTQ
RVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNPQQHLSTQPQVAMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNNPAGVPSV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctacccgatggcctcgctctacgtgggggacctgcacccc
gatgtcaccgaggccatgctctacgagaagttcagccccgccgggcccatcctttccatc
cgcgtttgcagggacatgatcacccggcgctctctaggctacgcctatgtcaacttccag
cagccggccgacgctgagagagctttagacactatgaatttcgatgttattaaaggcaag
ccagtccgtatcatgtggtctcagcgtgatccatctctacgtaagagtggtgttggaaat
atcttcattaaaaacttggacaaatcaattgacaataaggctttgtatgatacattttct
gcttttggaaatatcctctcttgtaaggttgtatgtgatgaaaatggatccaaaggctat
ggctttgtacactttgagacacaagaagctgcagaaagagctattgaaaaaatgaatgga
atgctgcttaatgatcgcaaagtatttgttggaaggtttaaatctcgtaaagagagagaa
gcagaacttggggctcgtgccaaggaattcactaatgtttacatcaagaattttggagaa
gacatggatgatgagaggctcaaagaactctttggcaagtttggccctgccttgagtgtg
aaagttatgactgatgagagtgggaaatccaaaggctttggtttcgttagttttgaaaga
cacgaggatgctcagaaagctgtagatgagatgaatggaaaagaactcaatggaaaacaa
atatatgttggcagagctcagaaaaaagtagaaagacaaacagagctcaagcgcaagttt
gaacaaatgaagcaggacaggatcaccagataccagggtgtaaacctttatgtgaaaaat
ctagatgatggaattgatgatgagcgcctacgtaaagaattctcaccattcggcacaatt
actagtgcaaaggtcatgatggaagggggccgaagcaagggctttgggtttgtctgcttc
tcttcaccagaagaagcaaccaaagcagttacagaaatgaatggcagaattgtggccacc
aaaccattatatgtagccttagcccaacgtaaagaagaacgccaagctcaccttaccaac
cagtacatgcagagaatggcgagtgtgagagcagtgcccaatccagtcatcaacccttac
caacctgcaccaccttcaggttatttcatggcagctattccacagactcaaaaccgtgct
gcatattatcctactagccagcttgctcagctcagaccaggtcctcgctggactgctcag
ggtgctagacctcatcctttccaaaacatgccaggtgccattcgccctacagctcccaga
ccaccattcagtaccatgagaccagcttcatcacaggtcccacgggtgatttcaacacag
cgtgtcgctaatacatcaacacagaccatgggaccacgtcctgctgctgcagctgctgca
gctactccagctgtgcgtactgtaccacaatataagtatgctgcgggtgtacgtaatcct
cagcagcacctcagtacacaacctcaggttgctatgcagcagcctgctgttcatgtacaa
ggtcaggaacctttgactgcttccatgttagcttctgcccctccgcaagagcaaaagcag
atgttgggcgaacgcctgttccctctcattcaagccatgcaccctactctggcgggtaaa
atcactggtatgttgttagagattgataactccgaactcctgcatatgcttgagtctcct
gaatctcttcgttcgaaggttgatgaagctgtagctgtactgcaagcccaccaagctaaa
gaagctgctcaaaaagcagttaataatccagcaggtgttccaagtgtctaa
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integrated database retrieval system
