Pogona vitticeps (central bearded dragon): 110075022
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Entry
110075022 CDS
T05000
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110075022 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110075022 (PRPF40B)
Spliceosome [BR:
pvt03041
]
Complex A
U1 snRNP components
U1 related factors
110075022 (PRPF40B)
Complex B
110075022 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
PT26-6P_helical
SelB-wing_2
DUF6887
Motif
Other DBs
NCBI-GeneID:
110075022
NCBI-ProteinID:
XP_020641514
UniProt:
A0A6J0T603
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MSAPDSGSGPPPGQPAPFPPAPPPPPILPPPFMPPPGIPPPFPPMGLPPMGPRPPPMPPM
PPGMMPPPPLIPPMPGPPPLGQMPTIVPPMLPGMMMPGVPAGPVPVSAGAAPVTDPSSAT
VTQAAPVIPNPLTGAMHQNVIVGGSSVSDAGRKKPAWSEHRAPDGRVYYYNSETKQSSWE
KPDELKSKAELLLSRCPWREYRSETGKPYYYNTQSKESRWTRPRELDDIEALIKEEEEDA
EKQQQPQQPETPLSDPASPNPSSAATSDTEGTPAGEGQETPATTEGVPGAAEEEITSSGD
PVRKEEEERVTANAWSNKEEAKQAFKELLKDKGVPASASWEQAMRLVSNDPRFSALPKLS
EKKQAFNAYKAQRDKEEKEEARLRAKEAKEELQRFLEQHNKMNSTTRYRKAEQMFGELEV
WAVVPEHDRKEIYDDVLFFLAKKEKEHAKQLRKRNIQALKSILDSMSRVSFQTTWSEAQQ
YLMDNPSFAEDEDLQNMDKEDALICFEEHIRTLEREEEEERERGRLRERRQQRKNREAFQ
AFLDELHESGRLHSMSTWMELYPSLSTDRRFANMLGQPGSTPLDLFKFYVEDLKARFHDE
KKIIKDILKDRSFSVEVKTTFEDFAHVISFDKRAATLDAGNIKLTFNSLLEKAEARERER
EKEETRKMRRKEAAFKGMLRQAAPPLEPTTTWDEVRERFVNNIAFEQITLESERIRLFRE
FVQLLETECQHFHAKAKKHTKKPKKHHRKRSASGSESGSDHAHRPAKRKKRNHSESAGSG
ASSSPDSEHSTRRSKRQKKKNKKKRHKSNSPESEGEHKKEPSRPEEWEREKAPPRPEGRG
HSPPRGTRRERALPSFGSTVSKPRAYSALVETFTARRPPPLQRLPRLLSREQDWPLQGED
SH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccagattcaggcagtggccctcctcctgggcagccggctccctttcctcct
gccccgccaccgccgccaattctgcctcctccctttatgcctcctcctgggatcccgcca
ccattccccccaatgggacttcccccgatgggaccacgcccaccccctatgccacccatg
cctcccggcatgatgccgcctccccccttgatcccgcccatgcctggaccaccacccttg
ggacagatgcctacaattgtgccaccaatgctgcctgggatgatgatgcctggagtacca
gctggcccggttcctgtctctgcaggggcagctcctgtgacagacccatccagtgccact
gttacccaggcagcaccggtgatcccgaacccattgacgggtgccatgcatcagaatgtg
attgttggtggctcctcagtatcggatgcaggccggaagaaacctgcgtggagtgagcac
agagctcctgatgggcgtgtttattactacaattctgaaaccaaacagtccagttgggaa
aaaccagatgagctgaagtccaaggcagagcttttgttgtcgagatgcccctggcgggag
tatcgctcagagactgggaagccctattactacaacacccagagcaaagagtcgcgctgg
acccgcccgcgggaacttgatgacattgaggcactgatcaaggaagaagaagaggatgca
gagaagcagcagcagcctcagcaaccagagactccgttatcagaccccgctagtcccaat
ccatcatctgcagccacctccgatacagaaggcacccctgcaggtgaaggacaggagaca
cctgccaccacagagggggttcctggtgcagctgaagaggagatcacaagcagtggtgat
cctgtccggaaagaagaggaagagcgtgtcactgctaatgcctggagcaacaaggaagaa
gctaaacaagcatttaaggagctgctgaaggacaagggtgtcccagcaagtgcgtcctgg
gagcaggccatgaggctcgttagcaacgacccacggttcagtgctttgcctaagctgagt
gagaagaagcaggcctttaatgcctacaaggcccagcgggacaaagaggaaaaggaagag
gcccgcctccgggccaaggaagccaaggaggagctgcagcgtttcctggagcagcacaac
aagatgaactccaccacacgctacaggaaagctgagcagatgtttggggagctggaagtc
tgggctgtggtgcctgagcatgaccgcaaagagatctatgatgatgtcctttttttccta
gccaaaaaggagaaggagcatgccaagcagctgcggaagaggaacatccaggctctgaag
agcatcctggacagcatgagccgggtcagcttccagaccacctggtccgaggcccagcag
tacctgatggacaaccccagctttgccgaggatgaggatctgcaaaacatggacaaggag
gatgctttgatctgctttgaggagcacattcggacgctggaaagagaggaggaggaggag
cgcgagcgtggccgactacgggagaggcgccagcagcgcaagaaccgggaggccttccag
gccttcttggacgagcttcatgaaagcgggcgcctgcactccatgtccacttggatggag
ctgtacccctccctcagcactgacagacggtttgccaacatgttgggccagcctggctcc
accccattggacctcttcaagttctatgtggaagacctcaaggcccgcttccatgatgaa
aagaagatcatcaaggatatcctgaaggatcggagtttcagcgtggaagtcaagaccact
tttgaggattttgctcatgttatcagtttcgataagcgtgcggccaccctggatgctggc
aacattaagctgaccttcaacagtctgctggagaaggccgaggcacgggagcgcgagcgg
gagaaggaagaaacccgcaagatgcggcgcaaggaggctgcgttcaagggcatgttgagg
caggcagctcccccactggaacccaccaccacctgggatgaggtccgagagcggtttgtc
aacaacattgcttttgagcagatcacgctggagtcggagcggatccgcctcttccgtgag
ttcgtgcaactgctggagacggagtgccagcacttccacgccaaggccaagaaacacacc
aagaagcccaagaagcaccatcgcaagcgctctgcctcgggctcagagtctggctcggat
catgcccatcgcccagccaagcgcaagaaacggaaccattcggaatcagctggttcaggg
gcatcttcatcacctgattcagaacacagcaccagacgctccaagaggcagaagaagaaa
aacaagaagaaaaggcacaaatcgaacagccctgaaagcgaaggtgagcacaagaaggag
ccgagccgacctgaggagtgggagcgagagaaggcccccccgcggcctgagggaagaggc
cactcccctccccggggcaccaggagggagcgggccctgccttcctttggctcaacagtg
tccaagccaagggcgtacagcgctctggtggaaaccttcacagccaggcggccgccaccc
cttcagaggctcccccgcttgttgagtcgggagcaggactggccccttcagggagaagat
tctcactga
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