Pogona vitticeps (central bearded dragon): 110075062
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Entry
110075062 CDS
T05000
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110075062 (TNRC6C)
03036 Chromosome and associated proteins [BR:
pvt03036
]
110075062 (TNRC6C)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110075062 (TNRC6C)
Chromosome and associated proteins [BR:
pvt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110075062 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
RRM_1
UBA
RRM_occluded
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
110075062
NCBI-ProteinID:
XP_020641590
UniProt:
A0A6J0T3Q1
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAAEQKTKVPEPIKTSLSQPQPAGTSTSTSTSTITNNSNG
KRASANGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGTLISTSPAQGTGQAGTSP
PPQPGAGGHHHPSKTQTPTDLGHSGLGDHYENTHWGQQPTFRSEANCSWDKVIIDRTDKE
AWPSITGTETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKPNGNNGTNGALI
QSTSNQSALGAGGANGNGNSARVWGVATGSNSGLAHCSASGGDGKMDNMIGDSRSQNCWG
ASNSNAGINLNLNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMSNQNGNPSGTL
GAWGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNANPMNSSPNPINAMQTNGLPNW
GMAVGMGAIIPPHLQSLPGANGTSVSQVSGGNGEGMGNSVWGMSPSNPATGNSNSGFSQG
NGDTVNSALSAKQNGSSSAVQKEGNGTSAWDSGPPTGPGVLAWGRGSGNSGVGNMHSGAW
GHPSRSTSNSINGEWSKPPNQHSNNDINGKGSTGWDSSSVTSQNPAMQQGNEQINSWAKA
AASGNTGSEGSNDSNGSQNEGSGGREGAGEGRRRDKGMIDQGQVQLPRSDLDPRVLSNTG
WGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQPSNSGGKNDGSIMNSTNTSSVSG
WVSSPPATVPPNTGWGDNNNKAPNGPGGWGEPTCSTAVNNAAAAKSGHTWSGTTNQEDKS
PTWGEPQKPKSQNWGDGQKSNPGWTSGSGDWVDSPSVPGHLGDGKKNGSGWDADNRSGSG
WNDATRSGTSGWGNGTNSKANTGTSWGESLKPSPQQNWASKSQDNNVSNWGGAASVKQTG
SGWVGGPVPTKPKDSSEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNN
PVIQSSTTATTTTTTIINANMADSQPPHQSSAQSNRSPLLGPGWGEMPAVHAKPEASWGE
PSSPSAAVDNGTSAWGKPPSSGTGWGDNSAESAGTYGRVSAPAAAPALCKPASKSSMQEG
WGSGGDEVNLSTSQWEDEEADMWNNTASQESNSSCSSWGNAPKKGLQKGMKTSSKQDEAW
IMNRLIKQLTDMGFPREPAEEALKSNSMNLDQAMSALLEKKVEMDKRGMGVADYNGMVTK
PLGCRPPPISKESSMDRPTFLDKDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIA
SGLGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLS
PQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNV
SGPIRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDNFSP
HPQAPGLSDLQTKEQQSSPNTFAPYPLAGLNPNMNVNSMDIPGGLSVKDTSQSQSRLPQW
THPNSMDNLSSAASPLDQNPSKHGAIPGGLSIGPPGKSSIEDSYGRYDLIQNSESPASPP
VAVPHSWSRAKSDSDKISNGSSISWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTI
NTTIQDVNRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDI
KSTWSSGPISHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSG
SAWSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEE
AAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNTGTTQTRLGSTSS
SHGMVRNDAGHWNPPCLGGKGSSDLLWGGVPQYSSSLWGPPSADDGRVIGSPTPLNTLLP
GDLLSGESI
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgaacaaaaaaccaaagtgccagaacctattaagaccagtttaagccagccc
caacctgccggtaccagtaccagtacttccaccagcactattactaacaatagcaatggc
aagcgtgcatctgccaatgggcagcagccagctgcatcccgatacctgcctcgtgaggtg
cctccacgcttccgccaacaagaacagaagcagctcctaaagagaggccagcctttgccg
actggaactctgatcagcacgagcccagcacaaggtactggacaagcaggaacaagtcct
cctccccagccaggagcaggtggacatcaccaccccagtaagactcagaccccaacagac
cttggtcacagcggattgggagatcattatgagaatactcactggggacagcagcccact
ttccgaagtgaagccaattgcagctgggataaagtgataatagacaggactgacaaggaa
gcgtggccttccattacaggaactgagactgagtctgcctcagaatgtactacagacact
gactctgcctccaactgtggctcagagaacagtagcatggctacagggagtgcccaaggc
aacttcactggacatacaaagaaacccaatggcaataatggcaccaatggagcactcatc
caaagcacttctaaccagagtgcccttggagctggtggagcaaatggtaatggaaattca
gccagagtgtggggtgttgccacaggttccaactctggcttagctcattgctctgccagc
ggtggagatggaaaaatggacaacatgattggagatagtagaagtcaaaattgctggggt
gcttccaactcaaatgctggcataaatcttaaccttaacccgaatgccaatccagctgcc
tggcctgtactcggacatgaaggaactgtgggagcaggcaacccttccagtatttgcagt
ccagtcagtgccataggtcagaacatgagcaaccagaatgggaacccatcaggcacctta
ggtgcttggggaaacttgttgccgcaagagagcacagaaccacaaacgtccacttctcag
aatgtgtctttcagcgtacaacctcagaaccttaacactgatggaccaaataatgctaac
cccatgaactcttcaccaaaccctatcaatgcaatgcagacaaatggactgccgaactgg
ggcatggctgttggcatgggggccatcatcccaccccacctgcaaagccttcctggtgct
aatgggacatcagtttctcaagtcagtgggggaaatggtgaaggaatgggcaattcagtg
tgggggatgtccccaagtaatcctgccacaggaaacagcaattctgggttcagtcagggg
aatggagacactgtgaactcagcattaagtgctaaacaaaatggatccagcagtgctgtg
caaaaggaaggaaatggaacaagtgcatgggattcagggcctcctactggtcctggggtc
ttagcgtggggcaggggcagtggcaacagtggtgttggtaatatgcattctggtgcttgg
ggtcacccaagccgcagcaccagcaatagcattaatggtgaatggagcaagcccccaaac
cagcattccaataatgacatcaatgggaaaggatcaacagggtgggatagctctagtgtt
accagccagaatcctgccatgcagcagggcaatgaacaaataaactcttgggccaaagct
gcagcatctggcaacacaggtagtgaaggaagtaatgatagtaatgggagtcagaatgaa
ggcagtggtggcagagaaggagctggagagggccgacgaagagacaagggtatgatagac
caagggcaagtccagttgccaaggagtgaccttgacccaagggttctgtccaacactgga
tggggacagactcctgtaaagcaaaacactgcctgggaatttgaagaatctccaaggtct
gaacgaaagaatgacaatggaacggaggcctggggttgtgcagctactcaaccttcaaac
tcggggggcaagaatgatgggtccatcatgaacagtacaaatacctcttcagtatctggg
tgggtcagctctccgcctgcaacagttccacctaatacaggttggggcgacaacaataac
aaagcgccaaatggccctgggggatggggagagccgacatgttctactgctgttaataat
gctgctgctgccaaaagtggccacacttggagtgggaccacaaatcaggaggacaagtca
cccacatggggtgaacctcagaaacccaaatctcaaaactggggagatggacagaaatca
aatccaggctggacttcggggagtggagattgggttgattccccatctgtccctggacac
ttgggagatgggaaaaagaatggttctggatgggatgccgacaatagatcagggtctggt
tggaatgatgctacacgttctgggaccagcggatggggaaatggcacaaacagcaaggct
aatacaggtacaagctggggagaatctttaaaacccagtccccaacagaattgggcttct
aaatcccaggacaataatgtgagcaattggggaggagctgcttctgttaaacagactgga
tcaggatgggttggtggaccagtgccaaccaaaccgaaagatagtagtgaagcaactgga
tgggaagagccctctccaccgtccatacggcgcaagatggagattgatgatggtacctca
gcttggggggacccaaattacaataacaacaagactgtaaacatgtgggacagaaataat
cctgtaatccagagcagtaccacagccaccaccaccaccactaccattatcaacgcaaac
atggctgattctcagccaccgcaccagtcaagtgcccagtcaaaccggtccccgctgctt
ggtccaggctggggagagatgcctgctgtccatgcaaagcctgaagcttcgtggggagag
ccttcctccccttctgctgcagttgataatggcacttcagcgtgggggaagccccccagc
agtggtacagggtggggagataattctgctgagtcagcagggacatatggaagagtgagt
gcaccagctgccgccccagcactgtgcaaaccagcttctaaatcttctatgcaagaaggc
tggggcagtggtggagatgaagtaaatctcagtacaagtcagtgggaagatgaagaagca
gatatgtggaataatactgcttcacaagagagcaattcctcttgtagctcctgggggaat
gctccaaagaaaggacttcaaaagggcatgaagacatctagtaagcaagatgaggcctgg
atcatgaatcgtctgataaaacagcttacagacatgggcttcccgagagagccagcagaa
gaggccttgaagagtaacagtatgaatctggatcaggccatgagtgctctgctggaaaag
aaggtggaaatggacaagcgtggaatgggagtggctgactacaacggaatggtcaccaaa
ccccttggctgccgcccaccaccaatctccaaagagtcttccatggaccgccccaccttc
cttgacaaggatggcggcctagtggaagagcccactacttcaccatttttgccttcacca
agcctgaagctccccctttcaaacagtgcactccctaatcagaccctgggcgggattgcc
tcagggctgggcatgcaaaacttgaattcttctagacagataccgagtggcaatctgggt
atgtttggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaaccgcca
gtgcaacctcttaactcatcccagcctagtcttcgtgctcaagtgcctcagtttctctcc
cctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaatcctgca
ctattaacctcgccaattaatcctcagcatatgacgatgttgaaccagctctatcagctg
cagctggcgtaccaacgtttacaaatccagcagcagatgttacaggctcagcgtaatgtt
tccggacccatcagacaacaggagcagcaagttgcacgtacaatcaataacatgcagcag
cagatccagcagcaccagcgccagctggcccaggccctgcttatgaagcagcagccaccc
cctccacatctgtctttgcacccctctgcaggcaaatcagccatggataacttttcaccc
cacccccaggctcctggcctatctgacctgcagaccaaagagcaacagtcttcaccgaac
acctttgctccttatccccttgctggattgaacccaaacatgaatgtaaacagcatggac
attcctggtggtttgtcagtgaaggatacttctcagtcccagtctcgccttcctcagtgg
acacaccccaactcaatggataatctttccagtgctgcttctccacttgaccagaatcct
agcaagcacggtgctatccctggaggtctgagtatcggtcctccaggaaagtcctccatt
gaagactcatatggccggtatgatctgattcaaaacagcgagtcaccagccagtcctcct
gtagccgttcctcacagctggtcacgtgccaaatctgatagtgataaaatctctaatggc
tccagcatcagctggccaccagaatttcatcctggagttccatggaaaggattgcagaac
attgaccctgagaatgatcccgatgttacacctggaagtgttccaacagggcctactatt
aacaccaccatacaagatgttaatcgctatctactcaagagtggagggtcatccccaaca
tcatctcagaatgccacgctgccttcatcgagtgcctggccacttagtgcctccggctac
agtagctctttcagcagcattgcatccgcacctagcattgcaggtaaattgtcagacatc
aagtcaacatggtcctctggcccaatttctcacactcaagcctctctgtcccatgaactg
tggaaggtacccagaaacactactgctcctacaagaccaccgccaggcttaacaaacacc
aagccatcatctacctggggtgccagccctctcggttggaccagctcttactcctctggc
tcagcctggagtacggacagctcaggaagaacaagcagctggctagtcctccgtaacctc
acaccccagattgatggttcaacactgcgtacgctatgcttgcaacatggtcctcttatt
acattccatctgaatctgactcaagggaatgctgtggtccgttacagttccaaggaagaa
gcagcgaaggcccagaagtctctgcacatgtgcgttttggggaacactaccatcttggcc
gagtttgctggagaagaggaagtgaaccgttttttagcacaaggccagccactgcccccc
acctccagttggcagtccaacactggaaccactcagacccgtttgggctctacaagcagc
tcacacggcatggtgcgcaacgatgcaggccactggaatcccccttgcctaggtgggaaa
gggagcagcgatctcctctggggtggggtccctcagtactcgagcagcctttggggtcca
cccagtgccgatgacggcagggtgattggaagcccaacgcctttgaatactctgctccca
ggtgaccttctcagcggggagtccatctag
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integrated database retrieval system
