Pogona vitticeps (central bearded dragon): 110075228
Help
Entry
110075228 CDS
T05000
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03030
DNA replication
pvt03410
Base excision repair
pvt03420
Nucleotide excision repair
pvt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
110075228 (RFC1)
03410 Base excision repair
110075228 (RFC1)
03420 Nucleotide excision repair
110075228 (RFC1)
03430 Mismatch repair
110075228 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvt03032
]
110075228 (RFC1)
03400 DNA repair and recombination proteins [BR:
pvt03400
]
110075228 (RFC1)
DNA replication proteins [BR:
pvt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
110075228 (RFC1)
DNA repair and recombination proteins [BR:
pvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
110075228 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
AAA_22
AAA_14
RuvB_N
AAA_30
AAA_5
Rad17
nSTAND3
RNA_helicase
AAA_33
AAA_16
AAA_19
NTPase_1
AAA_18
Motif
Other DBs
NCBI-GeneID:
110075228
NCBI-ProteinID:
XP_020641898
UniProt:
A0A6J0T3P4
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MAAVKMAAISGDTACEQDIRKFFGVLTPGKKYEGNTAKKNEKSKNREGTSDEKLKLKEIK
VKNTSHEEDFRQKQTNRKKRIIYDSDSEEEVPLAKKSKKPPDRKLTSVPDKILKKDPVVY
VSETDEDEDFVNAKASQKQKENGTSAGTLKVDAKAKVKSKPMSPVKLIPTSVIDYFGTGS
VHRSEKKLVSSKRKEPSQSGDSTLDDEAIARRLQLEENTEIERQLHEDEEFARTLALLDE
IPKKKPQKDPDEKQTVSTTKISPEQYHKVKPSISTLDSRPCSTKDRIHSESTRTSSLHSE
SSVSKEEKDGRNSKANSKSIKVQNGTPKGDKIRTESMTPRGKTVSPKEEKTPKKEKVSPQ
KSKSESPEDSEKKRMNYQAYRSFLNREGPRALGSKEIPQGAENCLEGMTFVITGVLESIE
RDEAKSLIERYGGKVTGNISKKTNYLIKGRDCGVSKCEKASSLGTKIIDEDGLFDLIRNT
PGKKSKYEIAAEAEVKKMRSKRDKTPLKAEQEKRKISPFKRDSEPRKRTCTFEKEDTFKS
VKKEAVEARRGLDFDQKILEKKQVSADARSPVQETSEKGVEELLWVDKYKPTSLKAVIGQ
QGDQSCANKLLRWLQNWYKNTSENKHGKPIKSGSRDDGATFKAALLSGPPGIGKTTTASL
ACEELGLNYVELNASDTRSKNGLKEVVAESLNNTSIKGFCSGMSSSVSTKHVLIMDEVDG
MAGNEDRGGIQELIDLIKHTKVPIICMCNDRNHPKIRSLVNYCFDLRFHRPRVEQIKGAM
MSIAFKEGLKIPPPAMNEIILAANQDIRQVLHNLNMWCARNRTLTYDGVKEDAKKAKKDI
KLGPFDVVRKVFATGEETSHMTLIDKADLFFHDYSLALLFVQENYVHVKPAAAGGDLKKH
LTLLSKAADSICDGDLVDRQIRSRQNWSLLPTQAIYSSVLPGELMRGYMNQFPSFPSWLG
KFSSTGKHDRIVQELSMHMSLRTHASKRAVNLEYLSYLRDAIVRPLTILGTEGVQGAIAF
MDSYCLMKEDVENIMEVTSWGGKLSAFSKLDPKVKSAFTRAYNKEAHLTPYSLQIVQKSK
QRAGSIQDAEFNEEQEADEVRSENEQDSVEYDAMIKKKTKTVKQPKGEKKGEKKGGKAKQ
KSK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttaagatggctgccatctctggggacactgcttgtgagcaggatattcgg
aaattctttggagttttaactcctggaaagaaatatgaaggcaacactgccaagaaaaat
gagaagtccaaaaacagggaggggacttcagacgagaagttaaaactgaaggaaatcaag
gtgaaaaatacatctcatgaagaagatttcagacaaaaacagacaaacaggaagaagagg
ataatctatgattcagattctgaagaggaggtgccgttggcaaagaaatctaagaagccc
ccagacagaaaactgacttcagtacctgataagattctaaagaaggatcctgttgtttat
gtttcagagacagatgaagatgaagacttcgtgaatgcgaaggcttcccaaaaacaaaag
gagaatgggacatctgcaggcacattaaaagtggatgccaaagcaaaagtgaaaagcaaa
cccatgtcacctgtgaaactgataccaacctctgtaattgattactttggaactggtagc
gtgcatcgatcggagaagaaactggtgtcaagcaaacggaaagaaccttcccaaagcggt
gattctacactagatgatgaggctattgccaggcgactacagcttgaagagaatacagag
attgagagacagctgcatgaagatgaagaatttgctagaacgctggccttgttggatgaa
ataccaaagaaaaagcctcaaaaagatccagacgagaaacagacagtttcaacaaccaaa
attagtccagagcaatatcacaaagttaaacctagcatttcaactcttgactcaagacct
tgttctacaaaggatcggattcactcagaaagcacacggacatcaagtcttcattcagag
tcttctgttagtaaagaagagaaggatgggagaaactcaaaggctaactccaaaagtatt
aaagtgcagaatgggactccgaaaggagacaaaatcagaacagaaagtatgactccaaga
ggaaagacagtgtcaccaaaggaggagaaaacacctaaaaaagagaaagtttctccccag
aaatctaagtctgaaagcccagaagattccgaaaagaagcgcatgaattaccaggcgtac
cgaagcttcctcaatcgagaaggtccaagagcgctgggttctaaagagataccacaaggt
gctgaaaattgcctggaagggatgacatttgttatcacaggtgtcttagagtctattgaa
cgtgatgaagccaaatctctgattgagcgctatggggggaaagtaactggtaacatcagc
aagaagacaaactaccttattaagggtcgtgattgtggtgtgtcaaagtgtgaaaaggca
tcctctttaggtactaaaattatagatgaagacggcttatttgacctgattcggaataca
ccaggcaagaagtccaagtatgaaatagcagctgaagctgaggtgaagaaaatgagatca
aagagggataaaaccccactgaaagctgagcaggaaaaaagaaaaattagccccttcaag
agagacagtgaacccagaaagagaacctgcacctttgaaaaagaagatactttcaaatct
gtcaagaaggaagctgtggaagcaaggaggggtctggattttgatcagaaaatcttggag
aaaaaacaggtctctgctgatgctaggagcccagttcaagaaacgagtgaaaaaggagtg
gaggaattattatgggtggacaaatacaagcccacatcacttaaagccgtcattgggcag
caaggtgaccagagctgtgccaataaactcttacgttggcttcaaaactggtacaagaat
acgtcagagaacaaacatggaaaacccattaagtctggcagcagagatgatggtgctact
ttcaaagcagctttgctctctgggcccccagggattggtaaaacgactactgcttcatta
gcttgtgaggaactgggcttgaactatgtggaattaaatgctagtgacactcggagtaag
aatggcttgaaggaggtggttgctgaatctctaaataacaccagcattaaaggattctgt
tcaggaatgtcatcttcagtcagcacaaagcatgtcctaatcatggatgaagtggatgga
atggctggcaatgaagacagaggaggaatacaggaattgattgacctcattaagcataca
aaagtcccaataatttgtatgtgtaacgatcggaaccatccaaagatccgttccctcgtc
aactactgctttgaccttcgttttcaccgaccacgtgtggaacagattaagggtgcaatg
atgtctattgctttcaaagaagggctaaaaattccacctccagcgatgaatgaaatcatt
ttagcagctaatcaggatattagacaagttctacataatcttaatatgtggtgtgctaga
aatagaaccctgacttacgatggtgttaaagaagatgccaaaaaagctaaaaaggacatc
aaactgggtccttttgatgttgtcaggaaagtttttgctactggagaagagacatctcac
atgacccttattgacaaagccgacctgttcttccacgattattctctagccctgctcttt
gtccaggagaactacgtacatgtgaaaccagctgctgctgggggtgatctgaagaaacac
ctgacgttacttagcaaagcagccgacagtatctgtgatggtgacttagtggatcggcag
atccgcagtcgacagaactggagccttctgcctacacaggccatttattcaagcgttctc
cctggagagctgatgagaggctacatgaaccaattcccaagctttccaagctggctggga
aaattttcatcaacaggaaaacatgatcgcattgtccaagaattgtcaatgcatatgagc
ctgaggacacatgcaagcaagagagctgtaaatctggagtatttgtcataccttcgagat
gcaattgtgagacctttgactatcctgggaactgaaggagtgcagggtgcgatagcgttt
atggattcttattgcttaatgaaggaagatgtggaaaatataatggaagtaaccagctgg
ggaggcaagctcagtgcattctctaaactagatcccaaggttaaatcagctttcacacgc
gcctataacaaggaggcacatcttacaccgtattctttgcaaatagtacaaaagtcaaag
cagcgtgccggatctatacaggatgctgaatttaatgaagaacaggaagctgatgaagtt
agatctgaaaatgagcaggatagtgttgaatatgatgcaatgattaagaaaaagaccaag
actgtcaaacaaccaaaaggagaaaagaaaggagagaagaaaggagggaaagcaaagcaa
aagtcaaaataa
DBGET
integrated database retrieval system
