Pogona vitticeps (central bearded dragon): 110075237
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Entry
110075237 CDS
T05000
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvt04990
]
110075237 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
pvt04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
110075237 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PRY
Motif
Other DBs
NCBI-GeneID:
110075237
NCBI-ProteinID:
XP_020641929
UniProt:
A0A6J0T779
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
MASPALDLAEESGQPLQDVSQPEPALAEAQQWIEQVTGRSFGDKDFRAGLENGVLLCELL
NSIKPGLIRKINRLPTPIAGLDNIALFLKGCKELGLKESQLFDPSDLQDISSRSTGKNHD
FSRKLKNVLVTIYWLGKTANSSTHYSGATLNLKEFEGLLTQMKKDTEDVESPKRSIRDSG
YVDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPDVVLRGSSDGRGSDSESDLP
HRKLPDVKKDDMSARRISYGEPKTVVPFNQYLPNKSNQTAYIPAPLRKKKAEREEYRKSW
STATSPLGGERPFSKSYPETIEEEQGEALVCSEEQSSGCRVATTTLPAKPVQIDVTQRDS
LHLSPTHSARKTARPRNNDKEPEELRKLRKLEQAGIKIMPAAQRYGSSQKHTCEMNELTP
DIILRKENPFMSCYQRKDSGSDGEQDNSVPDLEKDDFAIRRAKLNQPKLTLPFNQFMLGS
YISKDGGKGEEGKKHMKEQECSSGKKVHMTSAKGMSLCEEELFPQSQEDGSEKKKEAAVC
NIQRDDLAKRNVQICPSQLDLSMFVKTSITQADKEIWDRLKVSGMSSDEELMDVPGSFLS
SEKALEPAGHNDGVASHNVQIPKKATNPKQRFVHFGPVIEIDHKTWETLSVARAVTQDEE
QEASSRKSAEACVTSHEASPSISVSDDDKSVDHTDEVHRLHDNPREIILSNVDVYNSSAL
DACADSQKQKLSFFNEWHESSEEELDENLPDIERDDMLARRLGTFQKSTSPVRTTYPPIS
VASYGPLKQQQNITYCGERGSPQKAERSSSLTCGMQHEHRVPSPLSVNSVVTYEDGCARL
EGPDEQRTSTRVDKVRFKSPGRDDMMVRRTRAFLKQTGPSVKQFLPVPFSKQQNGEEAAK
EIVKTEKKVKSTAMTDTVATGNIPKLCAEIPEKLVVPLGPKLEEDAHRFSGGRQEAVSSE
MPKNAFDPDQVQPGCSSDTQEAFEKNSKEFLSLQDEQIQIFGSRTAVSDDAESVSMFDMR
CADETAVMQPHSKAHHEKLQAIHNQLKEDEDRWQDDLARWKNRRRSASQDLLKKEAERKK
MEQLLAGAEGSSERRKSIKTYREIVEEKERRERELHEAYKNARSREEADSILQQYIERFT
ISEAVLERLEMPKILERSHSAEPNSSSPPKDPNPLRYLRQQSLPAPKYTAKVEATIAPTG
GLEVSLSTGCSSPSKPFVSKAVPMLTPKPYSQPKNTQQVFRTFKVDGKVSMNGETVNGVE
EEQEREHTALIFAPSPSRLPNSDGVIGMDGEAAEEKQDSTSTELVLKKLIEHNKHREQTL
LSGRRLCEEMTPLKKTEGPLTEEGKQVNQKEETDSERSPSVGLASEPQEFSTPVSCGSST
VTSEEYSSLSNNFKEVGSDDELKKTERWQQKDAEEPIFQKIETLEASEQDGGIVFPQLKK
VPEMSQVVLQNSAPPADVGNHDKSNRFSCWSWDPEEERKRQERWQHEQERVLQERYQKEQ
DKLKEEWERAQREVEEEERKYYEEERKIIEDTVVPFTITSNSTEPLSTSSSVTDGNGSLN
MMDMHNFEEEEKQKEDRTVKKLFCEKEDGTSFSKSNEYEQWKENTSMVNKKGFPETSSQR
RNESSPVSECMLPIQMTFPLCQDIVQNQAKQSPHVSDVRQKNSPLEHNLSLPVSSTREIR
RAGCQETPRIGSPSPCSPSMQSQSPNRSVSGKKLCSSCGQPLGKGAAMIIETLGLYFHIQ
CFKCGICKGQLGDAASGTDVRIRNGLLNCNDCYIRSRTAGQPTTL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggccagccccgctttagatctggcggaggagtcgggccagcctctgcaagacgtctcc
cagcctgagccagctttggccgaagctcagcagtggatcgagcaagtaacgggaagaagc
tttggtgacaaagattttcgggcaggtttagaaaatggtgttctcctgtgtgagttgctg
aattcgataaagcctggattgattagaaagatcaatagactgccaactcccattgcagga
ctggacaacattgctttgttcttaaaaggctgcaaagaactgggtctgaaagaatcgcag
ctttttgacccaagtgaccttcaggatatctcaagtagatcaacaggaaagaaccatgac
ttcagcaggaagctgaaaaatgttttagtcactatctattggctggggaagacagcaaac
agcagcactcattacagtggagcaacactgaacctgaaagagtttgaaggattgctaact
cagatgaaaaaggacactgaggatgttgagagtccaaagcgtagcatccgtgacagtggc
tatgtagactgttgggattcagagcgcagtgactccctttctcctcctcgccatggtaga
gatgattctttcgacagtctggattcctttggctcccgctcccagcagactccgtctcca
gatgttgtattgagaggaagcagtgatgggagaggaagtgattctgaatctgacttgccg
catcgaaagttgccagatgtgaagaaagacgatatgtctgcaaggcggatatcctacggt
gaacctaaaacagttgtgccttttaaccaatacctccccaataagagtaaccagactgcc
tatattccagctcctctcaggaagaagaaagcagaacgagaggagtacaggaagagctgg
agcactgctacgtctccactaggaggagagagacctttcagcaaaagctaccctgaaact
atagaagaagagcaaggtgaggcactagtgtgttctgaagagcagtcctcagggtgcaga
gttgccactacaaccctccctgcgaagcctgttcagatagacgtgactcaaagggattct
ttacatctgtctcctacacattctgcaaggaaaacagcaaggcccagaaataatgacaaa
gagcctgaagaactcagaaagctaagaaagcttgaacaggctggtattaagatcatgcca
gctgcacagcgctatggcagcagtcaaaagcacacatgtgaaatgaatgagcttactcca
gacatcatccttcgcaaagagaacccctttatgtcgtgctatcagcgaaaagattctggc
tcggacggtgaacaagacaacagtgttcctgacctagagaaagatgattttgctatacgc
agagcaaagctaaaccaacctaaacttacattgccatttaaccagttcatgcttggatcc
tatataagcaaagatggaggtaaaggggaagaagggaagaaacacatgaaagaacaggaa
tgctcaagtggaaagaaggttcacatgacttcagcaaagggaatgtcattatgtgaagag
gaactcttcccgcaatctcaagaggacggatctgagaagaaaaaagaagcagcagtttgt
aacattcaaagagatgatctggctaaacgaaacgttcagatttgcccctcccaactagac
ttgtcaatgtttgtgaaaacttctataacacaagctgataaggaaatatgggaccggctg
aaagtttcagggatgtccagtgatgaggagctcatggacgttccaggttcatttctctcc
tccgaaaaggcattggaacctgctggccataatgatggtgttgctagccacaatgtacaa
atacccaagaaagctacgaaccccaagcagaggtttgtgcactttggaccagtgatagaa
attgaccataaaacatgggagacactttcagttgctagggctgtgactcaagatgaagag
caagaggcatccagtaggaaaagtgctgaggcttgtgtgacctctcatgaagcctcacct
tccatttctgtgagtgatgatgacaagtctgttgatcacactgatgaagtccacaggctg
catgataatcccagagaaataatactgtccaatgtggatgtgtataattcatcagcttta
gatgcttgtgctgattctcagaagcaaaaactaagtttttttaatgaatggcatgaaagc
agtgaagaagagttggacgagaatttgccagacattgagagagatgacatgctggctaga
agattaggaacttttcaaaaatctactagcccagttcgcacaacatatcctcccatttca
gtagccagctatgggcctttgaaacagcaacaaaacattacttattgtggagaacggggg
tctccacagaaagcagaaagaagttcctcactgacttgtgggatgcaacatgaacacaga
gtgccttcacctttatctgtaaactctgttgtaacatatgaagatggctgtgcaaggtta
gaaggtccagatgagcaaagaacttctacaagagtggacaaagtgagatttaaaagtcct
gggagagatgacatgatggtgagaagaaccagagcttttctgaaacagacgggaccaagt
gttaaacagttcctcccagttccgttctcgaagcagcagaatggtgaggaagcagctaag
gagatagtaaagactgaaaagaaagtgaagagcactgctatgacagatacagtggctact
ggaaacataccaaagctttgtgcagaaattcctgaaaagcttgtcgtgccccttggaccc
aaactggaagaagacgcacaccgcttctccggtggaaggcaagaagcggtgtcttctgaa
atgcctaaaaatgcgttcgaccctgaccaagtccaaccaggatgttcttctgacacgcag
gaagcttttgaaaaaaacagcaaggaattcctgtcactacaggatgaacaaatacaaata
ttcggctccagaactgctgtgtctgatgacgcagagagcgtgagcatgtttgacatgaga
tgtgcagatgagaccgctgtgatgcagcctcacagcaaggctcaccatgaaaagttacaa
gctattcacaaccagctgaaggaggatgaagatcggtggcaggacgatttggcccgatgg
aagaatcgccggagaagtgcttcacaagatttgctgaaaaaagaagctgagaggaaaaaa
atggaacagttgctggctggagctgaggggtccagtgaacgaaggaaaagcatcaagact
tacagagaaattgtggaagagaaagagaggcgtgagagagagttgcacgaagcatacaag
aatgccagatcacgtgaggaggcagatagtattctccaacaatacattgagaggttcacc
attagtgaagctgtccttgaacgcctggagatgccaaaaattctggaaagaagccattca
gcagagccaaattcatcatccccacctaaggaccccaatcccctgagatatttacggcaa
caatcgctccctgcccccaaatacactgccaaggttgaagcaaccatcgctcccactggt
ggattggaagtcagcctttcaacaggttgcagttctccaagcaaaccttttgtctctaag
gctgtgcctatgctgacccccaagccttactcacagcccaaaaatacacagcaggtcttc
agaacctttaaggttgatggaaaagtcagcatgaatggagaaactgtcaatggggtggag
gaggagcaagagagggaacacacagcattaatatttgccccttcgccaagtcgattgcca
aactcagacggtgtgataggaatggatggtgaggcagcagaggagaagcaagactccact
agtaccgagcttgttctgaagaaactcatcgaacacaataagcatagagagcagactctt
ttgagtggcagaagattatgtgaagaaatgactccattaaaaaagacagagggtcctttg
actgaagaaggaaaacaagtcaaccaaaaagaagaaactgattcagaaagatcgccttca
gtgggattagcttcagaaccccaagaattcagcacaccagtttcctgtggcagctctaca
gtgacgagtgaggagtactcttccctcagtaataatttcaaggaagtgggttcagatgac
gagctaaagaaaactgaaagatggcaacagaaggatgcagaagaaccaatttttcagaag
atagaaaccttggaagcttctgaacaagatggaggcatagtatttccgcaactgaagaag
gttccagagatgagccaagtagttttgcagaattctgctccaccagctgatgttggtaac
cacgacaagtcaaatcgtttcagctgctggtcttgggatccagaagaggagcgtaagcgg
caggaacgatggcagcatgaacaggagcgcgtacttcaggaaaggtaccagaaagagcag
gataagctgaaagaagaatgggaaagagcacagagagaggttgaagaggaggagcgtaaa
tactatgaggaggaacgcaagatcattgaggatactgtggtcccattcacaattacttca
aactctacagaacccttatctacatcttcctctgtgactgatggaaatgggagcctgaat
atgatggatatgcacaactttgaagaggaagaaaagcagaaggaagacagaacagtgaaa
aaattattttgtgagaaagaagatggcacttccttctcaaaaagcaatgaatatgaacaa
tggaaggagaatacgagcatggtaaataaaaaaggatttccagaaaccagttctcagaga
agaaatgaatcatccccagtatcagaatgtatgctgcccatccagatgacatttcctctc
tgtcaagatattgtacagaatcaggctaaacagagcccacatgtttcagatgtcagacag
aaaaattcaccgttggaacataatttaagcttgccagtcagctcgacaagagaaattagg
agggcaggctgtcaagagacccctagaattgggtcaccatcaccatgttctccatcaatg
caaagccagtcaccgaacaggtctgtcagtggaaagaagctttgctctagctgtggacag
cctctcggaaaaggtgctgccatgattatcgagactcttggtctttacttccatattcag
tgcttcaagtgtggaatttgtaagggacagcttggagatgcagcaagtggtacagatgtc
cggataagaaatggtcttctcaactgcaatgattgttacatcagatccagaaccgctggt
cagccaacaactttgtga
DBGET
integrated database retrieval system
