Pogona vitticeps (central bearded dragon): 110076235
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Entry
110076235 CDS
T05000
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110076235 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110076235 (DHX38)
Enzymes [BR:
pvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110076235 (DHX38)
Spliceosome [BR:
pvt03041
]
Complex C
Other components
Step II factors
110076235 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
PhoH
Flavi_DEAD
AAA_30
SLFN-g3_helicase
AAA_16
SRP54
AAA_7
Motif
Other DBs
NCBI-GeneID:
110076235
NCBI-ProteinID:
XP_020643888
UniProt:
A0A6J0T8X1
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MMDEGYDEFHNPLASSSEEYIRKREQHLQKQKQKRISAQRRQINEDNERWETNRMLTSGV
VHRLEVDEDFEEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKG
SQLVRKHREQKERKKAQHKHWELAGTKLGNIMGIKKEEDEGSNPVLAEDGTVDYRTEQKF
ADHMKEKSEASSEFAKKKSLVEQRQYLPIFAVQQELLTVIRDNSIVIVVGETGSGKTTQL
TQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMSVSLGEEVGYAIRFEDCTSENTVI
KYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSA
TMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSSAPGDILI
FMPGQEDIEVTSEQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVAT
NIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGQC
FRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMY
QLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFY
RPKGREEESDQVREKFAVPESDHLTYLNVYLQWKSNNYSTLWCSEHFIHAKAMRKVREVR
AQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTS
SLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQESRRRA
KQEASAMEEEMALAEEQLRARCEEQERRNPVGSVRSTKIYTPGRKEQGQPATPRHTPARF
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgagggctacgacgagttccacaaccctttggcttcttcctccgaggagtac
atcaggaagcgggagcagcacctgcagaagcaaaagcagaagcgcatctcggctcagcgc
aggcaaattaacgaggataacgagaggtgggagaccaaccgcatgctgaccagcggcgtg
gtgcaccggctggaggtggatgaggactttgaggaggacaacgcagccaaggtccacctc
ctggttcacaacctggtgcctccgttcctagacggccgtattgtcttcaccaaacagcct
gagccagtgatccccgtcaaggatgccacttcggatcttgcaatcattgcccgcaagggc
agtcagttagtacgcaagcatcgggaacagaaagagcggaagaaggcccagcacaagcac
tgggagctggcaggcaccaaactgggcaatatcatgggtatcaagaaggaggaagacgaa
gggtccaaccctgtcttggcggaggacggcactgtcgattaccggacagagcagaagttt
gctgatcacatgaaagagaagagcgaagccagcagtgagtttgctaagaagaagtccctt
gtggagcagaggcagtacttgcccatctttgctgtacagcaggagcttttgacggttatt
cgggataacagtattgtgattgtggtaggagagacgggtagcggcaaaaccacacagctg
acgcagtaccttcacgaggatggctacacggactacggcatgatcggctgtacgcagccc
cgccgagtggctgccatgtcggtcgcaaagcgtgtcagtgaagagatgagcgtgagcctc
ggggaggaggtgggctatgccatccgcttcgaggactgcacttcagagaacactgtgatc
aagtacatgacagacgggattttgctgcgtgaatccttgcgtgaagctgatctcgaccat
tacagcgccatcatcatggacgaggcccacgagcggtccctcaacaccgacgtcttgttt
ggcctcctgcgtgaggtggtggcccgacgctcagacctgaagctgattgtgacttcagcc
actatggatgcagaaaagtttgctgctttttttgggaacgtgcccatatttcacatcccg
ggccgtaccttccctgtagacatcctcttcagtaagaccccgcaggaggactatgtggag
gcagctgtcaagcaggccctgcaggtgcacctttcgagcgccccgggggacatcctgatc
ttcatgccaggccaggaggacattgaggtcacctcagagcagattgtggagcacctggaa
gagctggagaacgctcccgccctggcggttctgcccatctactcccagttgccctccgac
ctgcaggcgaagattttccagaaggcccccgacggagtccggaaatgcattgtggccacc
aacattgcagagacctcgttgacggtcgatgggatcatgtttgtgattgattctggctat
tgcaaactgaaggtcttcaaccctcggatcggcatggacgccctccagatctaccccatc
agccaggccaacgccaaccaacgggcaggccgagccggaaggacgggcccaggtcagtgt
ttcaggctgtacacccagagcgcctacaagaacgagctgctgacgaccaccgtcccagag
atccagagaaccaacctggccaacgtggttctgttgctcaagtctttgggggtgcaggac
ctgctgcagttccacttcatggatccgcctcccgaggacaacatgctcaactccatgtac
cagctgtggatcctcggggctctagacaacacaggtgggctgacctcaactgggcgcctg
atggtggagtttccccttgatcctgccctctccaagatgctgatcgtctcctgcgacatg
ggctgcagctccgagatcctgctcattgtctccatgctctccgtcccggccatcttctac
cggcccaagggccgggaggaggagagcgaccaggtgcgagagaagtttgctgtcccggag
agcgaccacctgacatacctgaacgtgtacctccagtggaagagcaacaactactccacg
ctgtggtgcagcgagcacttcatccacgccaaggccatgcgcaaggtgcgggaggtgcga
gcccagctcaaggacatcatggtgcagcagcgcatgagcttggcctcctgcggcaccgac
tgggacgtggttcgcaaatgcatctgcgccgcttactttcaccaggctgccaaactgaag
ggcattggagagtatgtgaacatccggacggggatgccctgccatcttcatcccacgagc
tcgctctttggaatgggctacaccccggactacattgtgtaccatgagctggtcatgacc
acgaaggaatacatgcagtgtgtcacggcggtggatggcgagtggctggctgaattgggg
cccatgttctacagcatcaaacacgcgggcaagtctcgtcaggagagtcgtcgacgggcc
aagcaggaggcctcggccatggaagaggagatggctctggcagaggagcagctgcgtgca
cgctgtgaggagcaagagcgccgcaacccagtgggcagcgtcaggtccacaaagatctac
accccggggcgtaaagagcaaggccagccggccacccctcgccatacaccagctcgcttc
ggcctgtag
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integrated database retrieval system
