Pogona vitticeps (central bearded dragon): 110076882
Help
Entry
110076882 CDS
T05000
Symbol
SCN1A
Name
(RefSeq) sodium channel protein type 1 subunit alpha isoform X1
KO
K04833
voltage-gated sodium channel type I alpha
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvt04040
]
110076882 (SCN1A)
Ion channels [BR:
pvt04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110076882 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
ATP-synt_B
Neur_chan_memb
FUT8_N_cat
SpoIIIAH
Motif
Other DBs
NCBI-GeneID:
110076882
NCBI-ProteinID:
XP_020645073
LinkDB
All DBs
Position
Unknown
AA seq
2009 aa
AA seq
DB search
MEQPPVLVPPGPDSFHYFTRESLAAIEQRIAAEKAKGVKKDHKDDEENGPKPSSDLEAGK
TLPFIYGDIPPGMVATPLEDLDPYYINKKTFIVLNRGKAIFRFSATPALYIISPFNLLRK
IAIKILVHSLFSMLIMCTILTNCVFMTLSDPPEWTKNVEYTFTGIYTFESLIKIIARGFC
IDGFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLYWNPDNSTNDTYLFNNTFEDN
STHNSTQFDWDEYISIESHFYFLEGQNDALLCGNSSDAGQCPEGYVCIKAGRNPNYGYTS
FDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAM
AYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEAAQQAAEAAATASAESKEPSGGGGGGVG
RLSESSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHRSESEDSIRRRGCRFS
IEGNRLTLERKHSSPHQSLLSMRGSLFSPRRNSRTSLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVSLVGGP
SVPTSPVGQLLPEVIIDKPATDDNATTTETEMKKRRSSSFHVSMDFLEDPTLRDRAMSIA
SIITNTMEELEESRQKCPPCWYKFANIFLIWDCCPCWLKVKHYVNIFVMDPFVDLAITIC
IVLNTLFMAMEHYPMSEEFEAVLNVGNLVFTGIFTGEMLFKLIAMDPYYYFQEGWNIFDG
IIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKISSDCVLPRWHMNDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAMA
RIDKGIAYVKRKLREFIQKSFVKTQKALDEIKPLEELNNKNSCISNHTIEIVKDLDYFRD
GNGTTSGIGTGSSAEKYVVDESDYMSFINNPSLTVTVPIALGESDFENLNTEEFSSESDL
EESKEKLNSSSSSEGSTVDIGLPAEEQPEAEPEEVLEPEACFTEGCVQRFKCCQVSVEEG
RGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVF
TYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLR
ALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINT
TTGDMFPIDIVNNKSQCEELIEANQTARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMY
AAVDSRNVLQQPVYEDNLFMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIF
MTEEQKKYYNAMKKLGSKKPQKPIPRPGNKYQGVVFDFVTRQVFDISIMILICLNMITMM
VETDDQSKQMEDVLYRINLIFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGM
FLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFL
VMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPP
DCDPKKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVATEESAEP
LSEDDFEMFYEVWEKFDPDATQFMEFEKLSEFAAALDPPLHLPKPNKVQLIAMDLPMVSG
DRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMQSNPSKASYEPITTTLKRKQEELSA
VIIQRAYRSYRLRKTVHQASFMYNKNKMERGAGQRIRDEILIDKINENSYTEKTDLTMST
AICPPSYDRVTKPIEEKHEKEGKDVRKKK
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccaccagtgcttgtaccaccaggaccggacagcttccactacttcactaga
gagtctctcgcagctattgaacaacgtattgctgcagaaaaggcaaagggagtcaaaaaa
gaccataaagacgacgaagaaaatggcccaaagccaagtagtgacttggaggctggcaaa
acactgccctttatttatggagacatacctcctggaatggtggctactcctttggaagac
ctggacccatattatattaataaaaaaacttttatagtattgaatagagggaaggcaatt
ttccgattcagtgccacccctgccctatatataataagtcctttcaaccttcttagaaaa
atagctattaagattttggtacattcattattcagcatgctcattatgtgcactattttg
accaactgcgtgttcatgaccctaagtgaccctccagagtggacaaagaatgtagagtat
acattcacaggaatatatacatttgaatcacttataaaaataattgcaaggggcttttgt
atagatggtttcaccttcctccgggatccttggaactggcttgatttcactgtcattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgggcattgaaaacaatatcagtcattccaggcctgaagacgattgtgggagcc
ctcattcagtctgtgaagaagctgtcagatgttatgattctgactgtattttgtctgagt
gtatttgctctaatagggcttcagctgttcatgggaaacttgaggcataaatgcttgtac
tggaatccagacaattctacaaatgatacttacctatttaataacacatttgaagacaac
agtacacataatagcacacaatttgactgggatgaatatataagcattgaaagtcatttt
tattttttggaaggacaaaatgatgctttgctttgtggcaacagctcggatgcaggtcaa
tgtccagaaggttatgtgtgtataaaagctggtaggaacccaaactatggttatacaagt
tttgacaccttcagctgggcttttttgtccctctttcgattgatgactcaggacttctgg
gagaatctttatcagctgactctgcgtgctgctggcaaaacatacatgatcttttttgtt
ctggtgattttcctgggctccttctacctgatcaacttgatcttggctgttgtcgccatg
gcctacgaagagcagaatcaagccaccatggaagaagctgaacagaaagaggccgagttt
cagcagatgctggagcagctgaaaaaacaacaagaagcagctcagcaggctgcagaggca
gctgcgacagcttcggctgagtccaaagaacccagcggaggaggaggaggaggagtgggg
aggctctctgaaagttcttcggaagcatcaaagttgagttcaaaaagtgcaaaagagcgg
agaaatcgaaggaagaaaaggaaacagaaagaacaatctggaggagaagaaaaagatgaa
gatgagtttcacagatctgaatcagaagatagcatcaggaggagaggttgccgattctct
attgaagggaataggctaactctagaacggaagcactcttcgccccaccagtctttgctg
agcatgcgtggctccctgttttccccaaggcgcaacagcagaacaagccttttcagcttc
agaggtagagcaaaggatataggatcagagaatgactttgctgatgatgagcacagcaca
tttgaagataatgatagcagaagagattccctttttgtgccgcgcagacatggtgaacgg
cgcaacagtaacattagtcaggccagtaggtcatccaggatgctggcagtgtttccagtg
aatgggaagatgcacagcacggtggattgcaatggggtggtttccttggttggtggacca
tctgttcctacatcgcctgttggacagcttctgccagaggtgataatagataaaccagct
actgatgacaatgccacaactacagagacagaaatgaaaaaaagaagatcgagctctttc
catgtttccatggattttctggaagatcctactctgagagatagagccatgagtatagct
agcataatcacaaacacgatggaagaacttgaagagtcccgacagaagtgtccaccttgt
tggtacaaatttgcaaacattttcttgatctgggactgctgtccatgttggttgaaagta
aaacattatgttaacatatttgtgatggatccatttgttgatcttgccattacaatctgc
attgttttaaatacactctttatggcgatggaacattacccaatgtcggaggaatttgaa
gcagtacttaatgtcggaaacctggttttcactggaatcttcacaggagaaatgcttttc
aaactaatagccatggatccatattattacttccaagaaggctggaacatttttgatggc
attattgtcactcttagtttggttgaactgggactagcagatgtggaaggactatcagtt
ctccgctcattccgattgctgcgtgttttcaaactggcaaaatcctggccaactctaaac
atgctgatcaagattattggcaactctgtgggtgccctggggaacctgactttggtcctg
gccattattgtcttcatttttgccgtggttggaatgcagctgtttggcaaaagctacaag
gagtgcgtctgcaagatctccagcgactgtgtgcttccacgctggcacatgaatgacttc
ttccactctttcttgatcgtcttcagagtactttgtggcgaatggatagaaactatgtgg
gactgtatggaggttgcaggtcaagccatgtgccttacagtcttcatgatggtcatggtg
attggaaatctagtggtcctgaatctgtttctggctttgctgctgagttcttttagtgca
gacaacctggctgccacggatgatgacaatgaaatgaacaatctccagattgccatggca
cgaatagataaaggcatagcttatgtgaaaagaaagctccgggaattcattcagaaatcc
ttcgttaaaacgcaaaaagctttagatgaaatcaagcccctggaggagctaaacaacaag
aacagctgcatctctaaccacaccatagaaattgtcaaagacctggattattttagagat
ggaaatgggaccacaagtggcattggtacaggcagcagtgcggagaaatacgttgtggat
gaaagtgattacatgtcgttcataaacaacccaagcctgactgtgactgtgcccattgct
cttggagaatccgatttcgaaaatttaaacactgaggagtttagcagtgagtcagatttg
gaagaaagcaaagagaagttaaattcttctagctcatcagaaggaagcacagtcgatatt
gggcttccagcagaagaacaaccagaagcagagcctgaagaagttcttgagcctgaagct
tgttttacagaaggctgtgtacaaagattcaagtgctgccaagttagtgtagaagaaggg
agaggaaaacaatggtggaatcttagaaaaacctgtttccgaatagttgaacacaactgg
tttgaaaccttcattgtctttatgattcttctgagtagtggtgctctggcctttgaagac
atatacattgaacagagaaaaactatcaagaccatgctggaatatgctgacaaggtcttt
acatacatcttcattcttgagatgctgttgaagtgggtggcatatggatatcaaacatac
ttcactaatgcctggtgttggctggatttcctgattgttgatgtatcattggttagttta
acagcaaatgctttgggttattcagaacttggtgccataaagtcccttcggacactgaga
gctctcaggcctctaagagccttgtcaagatttgaagggatgagggtggttgtgaatgcc
ctactgggagcaattccatccattatgaatgtgcttctcgtttgtcttatattctggcta
attttcagcatcatgggagtaaatctgtttgctggaaaattctaccactgtattaacacc
actactggtgacatgtttcctattgacatagttaacaataagtctcaatgtgaagaactc
attgaagcgaatcaaacagccagatggaaaaatgtgaaagttaactttgataacgtagga
tttgggtatctttctttactgcaagtggctacatttaaaggatggatggatattatgtat
gcagcggttgattcaagaaatgtactgcaacagccagtctatgaagacaacctttttatg
tatctttactttgttatcttcataatctttgggtcattcttcaccctaaatctgtttatt
ggtgtcatcattgataacttcaatcagcaaaagaagaagtttggaggtcaagacatcttt
atgacagaggaacagaaaaagtactacaatgcgatgaaaaagttggggtctaaaaagcct
caaaagcctatacccagaccagggaacaaatatcaaggcgtggtctttgattttgtgacg
agacaagtgtttgacatcagtattatgattcttatctgccttaatatgatcaccatgatg
gtagaaacagatgatcaaagtaaacaaatggaggacgttctataccgcatcaatctgata
ttcatcgtcctttttactggagaatgtgtcctcaaactcatttccctgcgctattattac
ttcaccattggatggaatatttttgattttgtagtcgtcatcctttctattgtaggtatg
ttcctagcagagatcattgagaaatactttgtgtcacccaccttgttccgagtgatccgt
cttgccaggatcggccggatcctgcgtctgatcaagggtgctaaagggatccgcaccctg
ctttttgccttgatgatgtcccttcctgccttgttcaacattggactcctccttttcctg
gtcatgttcatctacgctatcttcggaatgtccaattttgcctacgtgaagagagaagtt
gggatagatgacatgttcaactttgaaacttttggcaacagcatgatctgcctctttcaa
atcaccacctctgcaggctgggatggcttgctcgcccccattctcaacagtggaccccca
gactgtgatcctaaaaaggaccacccaggaagttcggtcaagggagactgtggcaatcct
tccgttgggatttttttctttgtcagctacatcatcatatcatttttagtggtagtaaat
atgtatattgctgtcattttggagaactttggtgtggcaaccgaagaaagtgcagagcct
ttgagtgaggatgactttgagatgttttatgaggtttgggagaagtttgacccagatgca
acccaattcatggaatttgaaaaactctccgaatttgcagctgctctggatcctcctctt
catttaccaaagccaaacaaggttcagcttattgcaatggatctgcccatggtaagcggg
gacagaattcactgccttgacatcttgtttgcttttacaaagcgtgtactgggcgagagt
ggagagatggatgctctccgcatacaaatggaagaccgcttcatgcagtccaatccttcc
aaagcctcctatgagcccattacaactacattaaagcggaagcaagaggagttatctgct
gtcattatccaacgggcttatagaagttaccgtttaagaaaaacagtacaccaagcttca
tttatgtataataaaaataaaatggaaaggggggctggccagcgtatcagagatgaaatc
ctcattgacaagataaatgagaactcgtatacagagaaaacggacttgaccatgtcaacg
gcaatttgtccgccatcctacgaccgtgtcaccaagcccattgaagaaaaacatgaaaag
gaagggaaagatgtacggaagaaaaaataa
DBGET
integrated database retrieval system
