Pogona vitticeps (central bearded dragon): 110077322
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Entry
110077322 CDS
T05000
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3
KO
K08736
DNA mismatch repair protein MSH3
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110077322 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvt03400
]
110077322 (MSH3)
DNA repair and recombination proteins [BR:
pvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110077322 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
110077322
NCBI-ProteinID:
XP_020645887
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MPRGRKRPQPGRDSRGQPVLSRFFQPVGPLKSSAYASALVSVRGAEERQEGSVAAAAPAL
ARPAAQEPNGKKRKVGKKQEHADRFSKSLESTRKEDGSTMTVLETEPKKCGPLQICPKTL
EKLREFSSNLEYPSNRTHPSVDLKESRQHVIRNNETQNTIKEEICPSISQSFDSNSCENT
QNISDTAFKKTTKPVYTPLELQFLEMKKQYKDAILCVECGYKYRFFGEDAEIAAKELNIY
CHKNHNFMTASIPTHRLFVHVRRLVAKGYKVGVVKQMETAALKAAGENRSSVFARKLTAL
YTKSTILGEDVNPLLKLDDSVDAEEIQSDMCDNYLLCISESNEKLKDKSQDIVIGIVAVQ
PTTGEVIVGSFQDYVTRLELESLILRLQPVEIILPQTVSDQTEKLISAVTSLRLLDDRIR
IEKLENKHFENSNAFQLITDFYGSHLLDSIGSQALSMVLNLDKSVLCSLAAVIVYLKAFN
LEKILYNPSSFKKLSNNAEYMTLNGTSLKNLEILQNQTDMKTKGSLFWVLDRTRTSFGRR
RLKKWVAQPLLKSSEINARLDAVSEVLLSESSVLGQIKSLLYKMPDVERGICSIYHKKCS
TQEFYLVINTLSHLEMAITVLVPAIRTEVQAMLLQKCLLEIPELLHITKKYLNILNEEAA
KTGDKTQLFKDLDDFPLIKMRKDEINAVLCQIQTHLQDVRRMLNCPSVNYVTVSGQEFQI
EVKNSLLFSVPANWIKVSSTKAVSRFHTPFIVENYRHLNQLREQLVLDCNAEWLRFLDNF
RDDYHSITRAVGHLATVDCVFSLAEVAKQGGYCRPVVKDGKSEITIKNGKHPVIDALLGE
QEQYVPNDTNLVEDDQRVMIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEARVGIVD
GIFTRMGATDNLFKGHSTFMEELTDTAEIIRKATSHSLVILDELGRGTSTHDGIAIAYAT
LEYFIRDVGSLTLFVTHYPPLCELERAYPRQVGNYHMTFLVNEDDSEQEKGSKDEENPEF
ITFLYQIKKEVAARSYGLNVAKLAAVPEEVLKKAAHKSKELERFVNMKRKRLRTFTKLWN
TNSAEELQRWKNVCETDDDLGQF
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggggcgaaaacgacctcagcctggcagggactctcgagggcagccggtctta
agtagattttttcagccggttggacccctgaagtcaagcgcttatgcttcggcgctcgtc
tccgtccgcggcgcggaggaacggcaggagggctcggtggcggcggcggctcccgcgctg
gctcggcctgcggctcaagaacctaatggaaaaaagaggaaagttggaaagaagcaagaa
catgctgacagattttcaaaatctctggagagcacaagaaaggaagatggcagtaccatg
actgtgctggaaactgaacccaagaaatgtggcccccttcaaatatgtccaaagactttg
gaaaaattgagagaattttctagcaatttggaatatccaagtaacagaactcatccatca
gtagatttgaaagaaagccgtcagcatgtgattagaaacaatgaaactcagaacactatt
aaggaagaaatttgtcctagtataagccaatcatttgactcaaattcatgtgaaaacacc
caaaatatttctgatacggctttcaaaaaaacaacaaaacctgtatatacaccacttgag
ctccagttccttgaaatgaaaaagcagtataaggatgctattttgtgtgttgaatgtggt
tataagtacagattttttggagaagacgcagagattgctgcaaaggaactgaacatctac
tgtcataaaaatcacaactttatgactgcgagcataccaactcacagactatttgttcat
gttcggcgtcttgtagcaaagggatacaaggttggagttgtaaaacaaatggaaacagct
gctttgaaggctgctggagagaacagaagctcagtctttgcccgaaaactaactgcattg
tatacaaaatctacaattctaggagaagatgtgaatcctctgctgaagctcgatgattca
gtggatgctgaagaaatacaatctgacatgtgtgataattatctcctctgcatctctgaa
agcaatgaaaagttgaaagataaatctcaggatattgtcataggcatagtggctgtccag
cctactacaggggaagttatcgttggtagttttcaggattatgtaactcgtttagagttg
gaaagtctaattttacgccttcagccagttgaaattattcttccccagactgtatcggat
caaactgaaaagcttatcagtgcagtaacgtccttgaggcttctcgatgacagaattcga
atagaaaagttggaaaacaagcattttgagaacagcaatgctttccagctgatcacagat
ttctatggcagccatctccttgacagtataggttcccaagctttgtcaatggttttaaat
ttggataagtctgtgttatgctccctggctgctgtaattgtgtatctcaaagcatttaat
ttagaaaaaatactctacaatcctagtagttttaagaagttgtcaaataatgctgaatat
atgacacttaatggaacgtcactgaagaatcttgaaatcttacagaatcaaactgatatg
aaaacaaaaggcagcctattctgggtcttggatcgtacgagaacttcatttgggcgacga
agactaaagaaatgggtggcacaacccctcttgaaatccagtgagatcaatgctagactt
gatgcagtgtctgaggtgctcctgtcagaatcaagtgtacttggtcaaatcaagtctctc
ctgtataagatgccagatgttgagagaggaatttgcagtatttatcataaaaagtgttcc
actcaagaattctatctagtaatcaacactttatctcatttggaaatggcaatcacagtg
ctggttccagctatacgaactgaggtgcaagcaatgttgttgcaaaagtgtctcttagaa
attcctgaattgcttcatataacgaaaaagtacttaaacattcttaatgaagaagcagca
aagactggagacaaaacacaactgttcaaagatcttgatgattttcctttaataaagatg
cggaaggatgagataaatgcagtactttgtcagatccagacacaccttcaggatgtaaga
agaatgctaaattgcccctctgtgaattatgtaacagtatctggacaagagtttcagatt
gaagttaagaactcactcctgttttctgtaccagctaattggattaaagtcagtagcaca
aaagctgtcagccgtttccatactccttttattgtagaaaattacagacatctgaatcag
ctacgtgagcagctagtccttgactgcaatgcagaatggctacgctttttagataatttt
agagacgattatcactcaatcactagagctgtgggtcacctagcaactgtggactgtgtt
ttttccttggctgaggttgccaaacaaggaggctattgcagacccgttgtaaaagatggg
aagtcagagataacgataaaaaatggtaaacatcctgtgatagacgcgttactgggagaa
caagagcaatatgttccaaatgacacaaacttagtagaagacgatcaaagggtaatgata
attactgggcctaatatgggtggaaagagctcttacataaagcaggttgcattgataaca
atcatggcacagattggttcctatgtgccagctgaagaagcaagagttggaattgtggat
ggcatattcaccagaatgggtgccacggataacttatttaaaggtcacagcacctttatg
gaagaactaacagatacagctgagatcattagaaaagcaacttcacattcactggtaatt
ttagatgaactagggagaggaaccagcacacatgatgggattgcaattgcctatgctact
ctagaatattttattagagatgtaggttcattaacactgtttgtcacccattatcctcca
ttgtgtgaattagaaagggcctacccaagacaagttgggaactaccacatgacatttttg
gtgaatgaagatgattctgaacaggaaaagggttctaaagatgaagaaaatcctgaattt
atcactttcctttaccaaattaagaaggaagttgctgcaaggagttatggactaaatgtt
gcaaaactagcagctgtccctgaagaagttcttaaaaaagcagctcacaaatcaaaagag
ctggagagatttgtgaatatgaaaagaaaaagactgaggacctttactaaactatggaat
accaatagtgctgaagaactgcaaagatggaaaaatgtgtgtgaaacagatgacgatctg
ggccaattttaa
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