Pogona vitticeps (central bearded dragon): 110077439
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Entry
110077439 CDS
T05000
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56 isoform X1
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvt04121
]
110077439 (TRIM56)
Enzymes [BR:
pvt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110077439 (TRIM56)
Ubiquitin system [BR:
pvt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110077439 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
RING_XB3-XBAT31
Phytase-like
DUF2982
Motif
Other DBs
NCBI-GeneID:
110077439
NCBI-ProteinID:
XP_020646149
UniProt:
A0A6J0TIT0
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MASSPAVPPSHDVSKAGLPPFRQFCFQRKHSTYDHLLRRRRFPPRTARRPSAPPMAAKAP
SLAEALTSGFLTCSVCLERLRQPKILPCLHTYCHPCLKKLAAGRKKDLQCPECRQSVPLP
PGGVDGLKTNFFINGLLDLVCPAGKAQPTCSPCRLIGQSANRVAVSRCLDCADDLCQACT
GGHHCSRLTHAHCVVDMESYLSGEYNEEIRKRQASRCKEHAGEELRFFCTPCAAPLCREC
RLGPHLQHPCLSLAEAAEARRPIIAGLLVGVEETVQRIQRGRASLEEELRVLEAHGVAVR
EAVERTCSRVVAQLLAQQEEVLAQLSEGLEERKKAAEVLRSELEFQEQVASSTVAFAQKV
LSLGREPEIVSLEQLISERLRQLQDFSWEPLAIRLPQLEICSDLQSSRSLLHLTFREGKQ
ALRRPEEEKDQKEKAREGKEREERATNGGARKQQQPVPLLGPEPQALPSPFVTSRETLGP
EGPPGGGPGSRVEAPLPPPKGTEAPPLLPKPTFLCSFWAKTSTDKKRPRVTGLCPYGCGE
ILVADEQNRKLKRFSLQGDFKGTVPVPSEVAPFSVAAVGSKVAFTAGSQLYLLNGEGALV
WQKALKRGQASHALTAVGGDRLAVSVARHLEVYNLEGRLVERIVPEGTQERCLVFLASRK
QGFVGSDWYRQSVVLFGGEGDLVAECRKEQLSECQPGAVCVDAVGTVYVVLREQNKVVAF
SEKGEVLGPFLTADNSLDRPRVATVAGDGRFVVALSNGTVHVFKIRYQRKSR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcctgcggttccgccttctcacgacgtgtccaaagcaggactgcctccg
tttcgtcaattttgcttccagaggaagcattccacttacgaccacctactacgtaggcgc
cggttcccaccaagaaccgcccgccgcccttcagccccaccgatggctgccaaagcccct
tccctcgcggaggcgctgaccagcggcttcctgacctgctccgtctgcctggagcgcctc
cggcagcccaagatcctgccctgcctgcacacctattgccacccttgcttgaagaagctg
gcggcagggcggaagaaggacctgcagtgccccgagtgccgccagtcggtgcctctcccg
ccgggcggcgtggacggcctgaagaccaacttcttcatcaacgggctcctggaccttgtc
tgccctgcggggaaggcacagcccacatgcagcccctgccggctcatcggccaaagcgct
aaccgggtggccgtttctcgatgcttggactgtgccgacgatctgtgccaggcctgcacc
gggggccaccattgctcccggctcacacacgctcactgtgtggtagacatggagagctac
ctctccggagagtacaacgaggagatccggaagcggcaggcctcgcggtgcaaggagcac
gccggggaggagctgcggttcttctgcaccccctgtgccgccccgctgtgccgagagtgc
cggctgggcccccacctccagcacccctgcctctccctggccgaagcggcggaggctcgc
cgccccatcatcgccggcctcctggtgggcgtcgaggagaccgtgcagcgcatccaacgg
ggacgggctagcctggaggaggagctgagggtgcttgaggcccatggcgttgccgtccgg
gaagcggtggagcgcacctgctccagggtggtggcgcagctgctggcccagcaggaggaa
gtgctggcccagctctcggagggcctggaagaacggaagaaagctgctgaggtcctgcgc
tcggagctggagttccaggagcaagtggcctccagcacggtggcctttgcccagaaggtg
ctcagcctgggccgggagccagagatcgtttcgctggagcagctgatctcggagaggctg
cgacagctgcaggacttttcctgggagcccctggccatccggctgccccagctggagatc
tgctcagatttgcagagcagccggtccctccttcaccttaccttcagggagggcaagcag
gccctgaggagaccagaggaggagaaagatcagaaggagaaggcgagggaggggaaggag
agagaggagagagccacaaacggaggagcccggaagcagcagcagccggtgccactcctg
gggcctgaaccgcaggccctccccagtccctttgtcacttccagggaaaccctcggcccg
gaggggccaccaggtggggggccaggcagccgcgtggaagcccctcttccccctcccaag
gggacagaagctcccccgctgctccccaagcccaccttcttgtgcagcttctgggcgaag
acttccactgacaagaagcgcccgcgggtgacgggcctttgtccctacggctgtggggag
atcctggtggccgatgagcagaaccggaagttgaagcgcttttccttgcagggggacttc
aagggcacggtcccagtgcccagcgaggtggctcccttcagtgtggctgctgtgggcagc
aaagtggccttcaccgctggctctcagctgtacctcttaaatggagagggggccctcgtc
tggcaaaaggcccttaagcgggggcaagccagccacgccctgacagccgttgggggagac
cgcctggcggtgagcgttgccaggcacctcgaggtgtacaacctggaagggcgcctggtg
gagaggattgtgccagagggcacacaggagaggtgcctggtcttcctggccagccggaaa
caaggcttcgtaggctctgactggtaccggcagagcgtggtgctcttcggtggggaaggg
gacctcgtggctgagtgccggaaggagcagctgagcgagtgccagccaggggccgtctgt
gtcgacgccgtgggaacagtctatgtggtgttgcgggagcagaacaaggtggtggctttt
tctgagaaaggcgaggtgctggggcccttcctcacggctgacaacagccttgaccggccg
cgggtggccacagtggctggggatgggcgcttcgtggtggccctgagcaatgggacggtc
cacgtctttaagatcaggtatcagcgcaagtcaagatga
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