Pogona vitticeps (central bearded dragon): 110077712
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Entry
110077712 CDS
T05000
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvt04121
]
110077712 (PDZRN3)
Enzymes [BR:
pvt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110077712 (PDZRN3)
Ubiquitin system [BR:
pvt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
110077712 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-rbx1
PDZ_Tricorn
RING_XB3-XBAT31
Sina_ZnF
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
110077712
NCBI-ProteinID:
XP_020646729
UniProt:
A0A6J0TKG1
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MGFELDRFSGEVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVKCQRIS
AKELNHVLPLKSLILKLDIKCANRARGCERVVQLQHLAEHAEMCDYSXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXERGCGLVLTHREHQAGSHGCLQALKAHNGALQAQLAG
LEKELKKEALRAGKREKSLLAQLSALQLELQMTALRYQKKFTEYSARLDSLSRSLADSSP
GKGEETKALTLVLHRDSGSLGFNIIGGRPCMDNQDGPSSEGIFVSKVADSGPAAKEGGLQ
IHDRIIEVNGKDLSKATHDQAVEAFKTAKDPIVVQVLRRAPRTKIFSPSHECLLVDMGTQ
TDITFEHIMALTKLGSPTPSVTVLDPYLLPEEHSSGHEYYDPNDYMGGIHQDMDREELEL
EEVDLHRVNSQDKFGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIE
IQNREEAVALLTSEESKNVSLLIARPEILQLDEGWMDDDRNDYLDDLHMDMLEEQHHQAM
QFTASMLQQKKKNEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNADDHTA
SSNTLGSQKKLRYSHDTLGSGDMQFSNESFISADCTDADFLGIPVDECERFRELLELKCQ
VKSTNPYSLYYHNSTLDMSKSDQESVDRELEMLNEELHNIELECLNIVRAHKMQQLKEQY
REPWMLHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISP
NNSLCRTAECLKLQGSEGMESAQKNVLSSPESHESSTPKLHPKEADLSKPLEIKERKASD
GSRSPSQPTKPGGYLSSYQHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSM
CKDLNSSNQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAIS
EMKMGRYWSKEERKQHLVKAKEQRKRREFMMQSRLECLKEQQGAEEKKEVNIIELSHKKM
MKKRNKKIFDNWMTIQELLTHGTKSPDGTKVYNSFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcagcggcgaggtggacccggacttcaagtgcaacctc
tgcaacaaagttctggaggacccgctcaccaccccgtgcggtcatgtgttctgcgccggc
tgcgtcctgccgtgggtcgtgcagcagggcagctgcccggtgaagtgccagcggatctcg
gccaaggagctcaaccacgtcctgcccttgaagagcctgatcctcaagctggacatcaag
tgcgccaaccgggcgcggggctgcgagcgggtggtgcagctgcagcacctggccgagcac
gccgagatgtgcgactactcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnngagcggggctgcggcttggtcctcacccaccgcgagcaccaggccggctcg
cacggctgcctgcaggcgctcaaggcgcacaacggcgccctccaagcccagctcgccggc
ctcgagaaggagctcaagaaggaggcgctgcgggccggcaagcgcgagaagtcgctcctc
gcccagctctcggccctccagctcgagctccagatgaccgccctccgctaccagaagaag
ttcaccgagtacagcgcccgcctcgactccctcagccgcagcctggccgactcctcgccc
ggcaagggtgaagaaactaaagcattgactcttgtccttcatcgggattctggatctctt
ggatttaatataattggtggccgcccatgtatggacaatcaagacggcccctctagtgaa
ggaatttttgtctctaaagtagcagacagtgggcctgctgccaaagaaggaggactgcag
attcatgacagaattattgaagtaaatggaaaagatttatctaaagcaacacatgaccaa
gccgtagaagccttcaaaacagctaaagaccctattgtggtgcaagtcctgaggagagcc
ccacgcaccaagatcttcagtccttcacatgaatgtctccttgttgatatgggcacccag
actgatatcacctttgaacacatcatggctctcaccaaattgggctcacctaccccatcc
gttacagtactggatccatatctcttgcctgaagagcattcatcagggcacgaatactat
gacccaaatgattacatgggaggcattcatcaagacatggacagagaggaactagaatta
gaggaagtggatttgcatcgagtaaacagccaagacaaatttggactcacagtgtgctac
cgaactgatgatgaagatgatattggcatttatattagtgagattgatcccaacagcatc
gctgcaaaggatggccgcatcagagaaggagatcgtataattcaaattaatggcattgag
atacaaaatcgagaggaagctgtggcactccttaccagtgaagaaagcaagaacgtctca
ttgctcatagcgagaccagaaatacttcagctggatgaaggatggatggatgatgacaga
aatgattatctggatgatttgcacatggatatgctggaggaacagcaccatcaggcaatg
cagtttactgccagcatgcttcagcagaagaagaaaaatgaagaggatggaggcaccaca
gacactgccaccattttatcaaaccagcacgagaaagacagtggggtaggacgtactgat
gaaagcactagaaatgatgaaagctcagagcaagagaacaatgccgatgaccacacagcc
tcttccaacactctgggaagccagaagaagctaagatacagtcatgacacattgggcagc
ggtgacatgcagttcagcaacgagtccttcatttccgccgactgcactgacgcagacttc
cttggcatcccagtggatgagtgtgagcggttccgcgagctgctggaactgaaatgtcag
gtgaagtccacaaacccatacagtctgtactaccacaacagtaccctggatatgagtaaa
agcgaccaggaaagtgtggacagggagctggagatgctgaatgaggagctgcacaacatt
gagctggagtgcctcaacattgtgagggcccataagatgcaacagctgaaagaacaatac
agagagccatggatgctacataacagtggcttccgcaactacaacaccagcattgatgtc
cggcgacatgaactttcagatattactgagctccctgagaaatcggacaaggacagctcc
agtgcttacaatacaggggaaagttgccgaagcacgcctctgactctggagatctccccc
aacaactctctgtgcaggacagccgaatgtctgaagcttcaagggagtgaagggatggaa
agtgctcagaaaaatgtgctatctagcccagagagtcatgaatccagcacccctaaactt
caccccaaagaggctgaccttagcaaaccattggaaatcaaagagaggaaagctagtgat
ggcagcagaagtccatctcaacccaccaagccaggtggctacttgtcttcctatcaacac
tctccctacaaacatgcccacattcctgcccacgcccaacactaccagagttacatgcag
ctgatacagcagaagtcagcagtggaatacgcacagagccaaatgagtttagtgagcatg
tgcaaagacttaaactcatccaatcagagtgaacccaggatggagtggaaagtgaaggtc
aggagcgatggtacccgttacattactaaaagaccggtcagggaccggttgctgagagag
cgtgccataaagatcaaggaagagcgcagcggcatgaccaccgacgacgacgccatcagt
gaaatgaagatgggccgctactggagtaaggaggagcgaaagcaacatctcgtgaaagcc
aaggagcagaggaagcggcgcgagtttatgatgcagagcaggctggagtgtttaaaggaa
cagcaaggggccgaggagaagaaggaagtgaatatcatagaactgagccacaaaaaaatg
atgaagaaaaggaataaaaagatttttgacaattggatgacaatccaagaactcctaacc
catggcaccaaatctcccgatggcacaaaggtttacaactccttcctgtcggtgactacc
gtataa
DBGET
integrated database retrieval system
