Pogona vitticeps (central bearded dragon): 110078312
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Entry
110078312 CDS
T05000
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvt04147
]
110078312 (COL18A1)
00535 Proteoglycans [BR:
pvt00535
]
110078312 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
pvt00536
]
110078312 (COL18A1)
Exosome [BR:
pvt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110078312 (COL18A1)
Proteoglycans [BR:
pvt00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
110078312 (COL18A1)
Glycosaminoglycan binding proteins [BR:
pvt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110078312 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
DUF959
DUF1554
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
110078312
NCBI-ProteinID:
XP_020647973
UniProt:
A0A6J0TK75
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MAPAELNLGLLLLLTCCGLSNTQGWSWLWGSSKKTTLSPPTTVANLDEQLTQTEETALRL
VTPEGTATPSSPLESTTAQPKGRVWTIFTLKRPDFTPATIISTAASPTPLENREGSIAGV
GTEILNVAEEISNLVQHWDEKTAEGTEKTETPATTDLLEASLIPDTELVSLQNVSSSSRA
DGQTSLENQPPEHIRSVIPKPALLWNKTRLLLQKPDAPLAGSASFSFSSSNHITGTMLAF
QETTEAGQEGATAVPATRAAWGPDSGNEGILSSADILELHKPQADSSRMHGGMPSKVVGA
LDHWLSRYVADSDRSLSKGDRIHLRLKDPSFFKHSGIVVADTPGDSVSNSNATNFVDFSS
ANNSDSLEFLLTYTMQHFSNNSTGFPSFFPGLKPTAGHCLPLPTKLSYCNTLGMKHFRVP
NYLHQGSEEEIRAALHEWEGLLKSRCHRYLEWFFCLLLVPGCNASLPITPPPCRGFCEAL
KDLCWIHLKEGHLPISCDSLPEEDGVDSCVFVNVSAENFSTEVGLIELIGDPPPDQITKV
YGPDNSPGYVFGLDANTGQVARYHLPSPFYRDFSLLFHVQPTTDKAGVLFAITDASQSII
YVGVKLSEVKDGKQQIIFYYTEPGSQNSYAAATFTVPSLVNQWTRFAISVEDEEVVLYMD
CEESERVHFERSPDEMDLEDGSGLFVAQAGGADPDKFQGVIAELKVKGDPRAAETQCEEE
EDDSDMMSGDGGSGVAEKPRPSEKERVTPVISSLPQPPPVTSPPTAKKPTQPEEKILLQT
ELTEQKERLPSASGVGIKGEKGDAGEKGERGLKGEPGLSGVLPSLDAKGEKGEKGELGVK
GNAGFGYPGSKGQKGEPGAKGSPGPAGPPGPPGTVVKRPDGSVVEQVAGQPGPTGPPGPP
GKDGLPGKDGEPGDPGEDGKPGDVGPQGFPGTPGEPGQKGEKGDPGIGVRGPPGLPGPPG
KPGFSSKLDKLTFIDMEGSGFGGDLENLRGPRGPPGPPGPPGVPGLPGQPGRFGTNGTDL
PAPPGLPGVPGRDGSPGLPGPPGPPGLPGRDGIAGQPGEKGENGEPGELGLPGAPGPKGN
KGESGLVGAPGEPGLAGLPGPMGPRGMPGPPGPPGPGLGAGFDDMEGSGLPFVSALPGAR
GPPGPQGPPGLPGLKGDPGEVGFPGLPGQKGEPGLQGQDGHPGIKGSPGPQGPKGDRGNP
GPRGEPGRDGIGLPGPPGPPGQITYLSSNDENLPALPGPEGKPGHAGFPGPTGPKGETGS
PGIQGSPGPKGEKGEPGVIIGPDGTIIAADAKGQKGESGARGPVGPAGPLGRPGQKGEIG
FPGRPGRPGMNGLKGEKGDPANSSGRMGLPGPPGPPGPPGPPGNIVPVYDNNAFGDVGPP
GPPGLPGYQGAPGQKGEKGDVGPPGPPAFVHPIQIIEFGSRALSFVQGPKGDSIRGPPGP
PGPQGPPGAGYEGRAGNPGPPGPPGPPGPPSFPGPHRQSISVPGPPGPPGPPGPPGISDA
SSSSGLRIFPTYQSMMGRGHEIPEGQLLFIRDREELYIRVRNGFRRVLLEDRIALSGPGL
DNEVYDRPSSAHYSHGGGTASSGSQRPFQQHLPVHSHREYGAYSTAKPWRGDESAINQHR
LPEHPAVHQPQQGVQHQQEPLNAFFLNNRQPEAVPSAVHTHHDFQPALHLIALNTPLSGS
MRGIRGADFQCFQQAREVGLTGTFRAFLSSRLQDLYSIVRRADRSTVPIVNLRDEMLFNN
WESLFSGSEAPFRTGGRILSFDGRDVLRDSAWLQKHVWHGSDSKGRRLTESYCETWRTDD
AVVTGQASSLASGKLLEQKSSSCKNAFVVLCIENSFMTSSKK
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggctccagctgagctcaatcttgggctcctgttgctgctgacctgctgtggcttatct
aacacacagggctggagctggctttgggggtcttcaaagaaaacaaccctttctcctcct
accacagttgccaatcttgacgagcagttgactcagacggaggagacagctctgcgtctt
gtcacgcctgagggtacagctactccaagcagccccctggaaagtactactgctcagcca
aaaggaagagtgtggactatcttcaccctgaagagacctgatttcactccagctaccatc
atatctacagctgcatctcccactccgctggaaaacagggaaggaagtattgcaggagta
gggaccgagatcctcaacgtagctgaagagatcagcaacttggttcagcactgggatgaa
aaaacagcagagggaacagagaagacagagacacctgcaaccactgaccttttggaagca
tccctgatcccagatactgagctggtgagcctccagaacgtctcttccagctccagagct
gatgggcaaacctcgttggaaaatcagccgccggagcatattcgctctgtaattccaaag
cctgctcttctgtggaacaagacgcgcctcctcttacagaagcctgatgcaccgctcgca
ggtagtgcttctttctcattttcgtccagcaatcatatcacgggcaccatgttggctttt
caagaaactacagaggcgggccaagaaggtgcgaccgctgtcccagcaaccagggcagcc
tggggacctgactcaggaaacgaaggaattttgtccagtgcagatatcttggaattgcac
aagcctcaggctgatagcagccgcatgcatggtggaatgccatccaaggtggtgggtgct
ttagaccactggctgtcccgttatgttgcagattcagaccgatcactctctaagggtgac
agaatccacctccgccttaaagatccttccttctttaagcattctgggatagtagtagct
gatacacctggtgattctgtttctaattcgaatgcaactaattttgtggatttctcctct
gccaataactctgactctcttgagtttctactaacctacactatgcaacattttagcaat
aatagcacagggtttccttccttctttcctggattgaagccaacagctggccactgcttg
cccttaccgaccaagctgtcgtattgcaacaccctgggcatgaagcatttccgagtgccg
aattatttgcatcagggcagtgaggaggaaattcgggctgctttgcatgagtgggagggg
cttcttaaatctcggtgtcaccgctacttggagtggtttttctgcttgctgctggtacct
gggtgcaatgcttctcttccaataacaccgccaccgtgccggggattttgtgaggccttg
aaagatctgtgttggattcatctgaaagaggggcaccttcccatatcgtgtgactctctt
ccagaggaggatggtgtagattcatgtgtgtttgttaatgtttcagcagaaaacttcagt
acagaagttggcctcatagagctgattggagatcccccaccagaccagataaccaaagtg
tatggcccagacaacagccctggctatgtgtttggactggatgccaacactggacaagtg
gcacgttaccacctccctagccctttttatagagacttctccctcttgttccatgtgcag
cccacgacagataaggcgggagtgctttttgctatcacagatgcctcccagtcaatcatt
tatgtcggtgtgaagttatccgaagtgaaagatgggaaacaacagattatcttctattac
acggagccgggctctcagaactcctatgctgctgctaccttcactgtgccttccctggtg
aatcaatggactcgctttgccatcagtgtggaagatgaggaagtggttctctacatggac
tgtgaggagtctgagcgggtccattttgagcgctcacctgatgagatggacttggaagat
ggttcagggctttttgtggcacaggctggaggagctgatcctgataaattccagggtgta
attgcagaattgaaagtgaagggagatccccgggcagctgaaacccaatgtgaggaagag
gaagatgactctgatatgatgtctggagatggtggaagtggagtagcagaaaagccacgg
ccatcagaaaaggaaagggtgactccagtgatctcaagcctgccacaacctccacctgtc
acgtctcctcctactgccaaaaagcccacacaaccagaagagaaaatccttttgcaaact
gagctaactgaacaaaaagagaggttgccatctgcttcaggagttggaatcaaaggtgag
aaaggggacgctggggaaaaaggcgaacgtggccttaaaggagagcctggacttagtggg
gtcttgccatcccttgatgccaaaggtgaaaagggagaaaaaggagagttgggtgttaag
ggaaatgcaggctttggctatccaggctctaaaggacagaaaggtgaacctggtgctaaa
gggtctccaggccctgctggaccccctggacccccagggacagttgtgaagcgccctgat
ggctcagtggtagaacaggttgctgggcaaccaggacccacgggccctccagggccacct
gggaaagatggcttgcctggaaaggatggagagccgggagatcctggtgaagatggtaaa
ccaggtgatgttgggccacaaggatttccagggaccccgggtgagcctggacagaaaggt
gaaaagggtgaccctggcattggtgtaagaggtccccctggactaccaggaccacctggg
aaacctggattcagttctaaattggacaagttgacatttattgatatggaaggctctggc
tttggaggtgatttggagaacctacgaggcccaagaggaccaccaggccccccaggacct
cctggtgtacccggcttgccaggacaacctggaagatttgggacgaatggtacagatcta
cctgcgccacctggcctccctggagtgccaggcagagatggtagcccaggattgccaggg
cctcctggccctcctggtcttccaggaagagatgggattgctggacagcctggagagaaa
ggagaaaatggagaaccaggtgaactcggcctcccaggagcacctggacctaagggcaat
aaaggagaatcagggctagtgggagcacctggcgaacctggcctggcagggcttcctggg
cccatgggcccccgaggaatgcctggccctcctggccccccaggtccaggtttgggagct
ggatttgatgacatggagggctcaggactgccatttgtttctgctcttcctggagcacgt
ggaccaccaggaccccagggtccaccaggacttccaggattgaagggagaccctggtgag
gttggttttccaggtttgccaggacagaagggagagcctggtttgcaaggtcaggatgga
catcctggaataaagggttccccaggaccacaagggccaaagggtgacagaggaaatcca
gggcctagaggtgaaccaggtcgagatggaattggtctgccaggtcctcctggccctcca
ggacaaatcacctacttgtccagcaatgatgaaaacttgcctgctcttccaggccctgaa
ggcaaaccggggcatgctggtttcccgggcccaacaggaccaaaaggtgagacaggatcc
ccaggtattcaaggctctcctggaccaaagggtgagaagggagagccaggagttataatt
ggtcctgatggaacaatcatagcagcagatgccaaaggacaaaagggtgaatcaggtgca
agaggacctgtgggaccagcagggcctcttggacggcctggacagaaaggagaaattggt
ttccctggaagaccaggtcgacctggcatgaatggactgaagggagaaaaaggtgaccca
gccaactcaagtggaaggatgggcctaccgggccctccgggacctcctggcccaccaggc
cctccaggcaacattgtccctgtttatgacaataatgcctttggtgacgtgggcccccct
ggacctccagggctacctggctaccaaggtgctccaggtcagaagggagaaaagggtgat
gtgggtcccccagggcctccagcttttgttcatcccatccagataattgaatttggcagc
cgtgctttgtcctttgtccagggacccaagggtgacagtattaggggtccacctgggcct
ccaggtcctcaaggacctcctggtgcaggatacgagggacgtgccgggaacccaggccct
cctggtcctccaggccctcctggccctccttctttcccaggacctcataggcaatcaata
agcgttcctggaccacctgggccaccaggaccaccaggacctccaggaattagtgatgcc
tcttcttcttctgggctgcggatctttccaacatatcagagtatgatgggcagaggtcat
gaaatacctgaaggccagcttcttttcatccgggatagagaagagctctacatccgtgtt
cgcaatggtttcaggagagtccttcttgaagacaggatagccctctctggccctgggctg
gacaatgaggtatatgataggccttccagtgcccattactcacatggaggaggaacagcc
tcatctggatctcagcgccctttccagcagcatttgcctgtgcattcacaccgggagtac
ggtgcttactccactgccaagccttggagaggagatgagagtgccatcaaccaacatcgc
ctccctgagcatcctgccgtccaccagcctcagcagggagtacaacaccagcaggagccc
ttgaatgccttctttcttaacaatcgccagccagaggcagttccttctgctgttcataca
catcatgatttccagcctgctcttcaccttatagccttgaacactcccttgagtggcagc
atgcgtggcatccgaggagctgacttccagtgtttccagcaagccagggaagttgggctg
acaggcactttccgagcattcctttcctcccgtttgcaagacctctacagcattgtgcgc
agagcagacaggagcacggtgcctatagtcaatctcagggatgaaatgctatttaataac
tgggagagcctcttctcaggctctgaggctccattcagaaccgggggtcgcatcctgtcc
tttgatggaagggacgtcctgagagattctgcatggcttcagaaacatgtgtggcatggc
tctgactccaaggggcggcggctaacggagagctactgtgagacgtggcggacggatgac
gctgtggtgacaggtcaggcttcctcgctggcatcgggtaagctcctggagcagaagagc
agcagctgcaaaaatgccttcgttgtcctctgcatcgagaacagcttcatgacctcctcc
aaaaaataa
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integrated database retrieval system
