Pogona vitticeps (central bearded dragon): 110078318
Help
Entry
110078318 CDS
T05000
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03420
Nucleotide excision repair
pvt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110078318 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
110078318 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvt04121
]
110078318 (DDB1)
03400 DNA repair and recombination proteins [BR:
pvt03400
]
110078318 (DDB1)
Ubiquitin system [BR:
pvt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
110078318 (DDB1)
DNA repair and recombination proteins [BR:
pvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
110078318 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
110078318 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
110078318
NCBI-ProteinID:
XP_020647982
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MSCNYVVTAQKPTAVNSCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLERENKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGGVSLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHHE
TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPNRKNISVASCNSCQVVVAVGRVLYYLEIHPRELKQISCTEMEHEVAC
LDITPLGDTTGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIESGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEGTICEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAM
VYPDEAEPKQGRIVVFHYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTA
EKELRTECNHYNNIMALYVKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMS
AVEILDDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEFGLFHLGEFVNVFCHGSLVMQ
NLGETSTPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDVQNRLNKVIKSVGKIEHSFWRS
FHTERKTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEE
LTRIH
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcaactacgtggtgacggctcagaagcccacggccgtcaacagctgcgtcacc
gggcactttacctcggcggaggacctgaacttgttgatcgccaagaacacccgcctggag
atctatgtggtcaccgcggaagggctgcggcccgtcaaggaagtgggcatgtatggcaag
atcgccgtcatggagcttttccggcccaagggggagagcaaagatttgctcttcattctt
acagcaaagtataatgcttgcatccttgagtataaacagaatggggagagcattgatatc
atcacccgagcccatggcaacgtgcaggatcgtattggtcgtccctcagaaacagggata
attggtataattgaccctgagtgtagaatgattggactgcgcctctatgatggcctcttc
aaagtgattcctctagaacgagaaaataaggaattaaaggcatttaacattcgtctggag
gagctgcaggtcatcgatgtcaagttcctgtatggatgccaggctccaaccatctgcttt
gtttaccaggatccacagggccgtcatgtgaagacctatgaagtgtctttacgagagaag
gagtttaacaaggggccctggaaacaggaaaatgtggaggctgaagcctccatggtaatt
gcagtgcctgagccatttggaggtgctatcattattggacaagaatccatcacataccac
aatggcgataaatacctagctatagccccaccaatcatcaagcaaagtacaatcgtatgc
cacaatcgtgtggatccaaatgggtcccgttaccttctgggtgacatggagggccggctt
ttcatgcttctgttggagaaggaagagcagatggatggtggtgtcagtttgaaagacttg
cgtgtggaactgcttggagagacatccattgcagaatgcctgacttacctagacaatggt
gttgtgtttgttggctcacggcttggggactcccaactggtgaagctcaacgtggacagt
aatgagcaaggttcatatgttgtcgccatggaaaccttcaccaaccttggtcccattgtg
gacatgtgtgtggtagatcttgagagacaaggtcaagggcagctggttacatgctcaggt
gcctttaaggagggttctctaaggattattcggaacggtattgggattcatgaacatgcc
agcattgatctgccaggaattaaaggattgtggcccctgagatcagacccccaccatgaa
actgataacaccttagtgctatcctttgtgggacaaaccagggttttgatgttgaatggg
gaagaagtggaggaaacagaactgacaggatttgtggatgatcagcaaacttttttctgt
ggcaatgttgcgcatcagcagttaattcagataacatcagcctcggtacgactggtcagt
caggagcctaaggcccttgtaagtgaatggaaagagcccaacagaaagaacattagtgtg
gcttcctgcaacagctgtcaagttgtggtggctgtagggagagtattatactatcttgaa
atccaccccagggagctcaagcagataagctgcacagaaatggagcatgaagtggcctgt
ttggacatcactcctctgggagataccactggcatgtcgcctctgtgtgctattggcctc
tggacagacatctcagcgcgcattctgaagctaccctcatttgagctgttacacaaggag
atgctgggaggagagattatcccacgttccattctgatgaccacatttgagagtagccat
tatctgctttgtgcccttggggacggggctcttttctactttggcttgaacattgagtca
ggtttgctgagtgatcggaagaaagtaacgttgggaactcagcccactgttttaaggaca
tttcgctccctctccaccaccaatgtctttgcctgctctgaccgcccaacagtgatttac
agcagcaatcacaagctcgtcttttctaatgtcaatcttaaagaagtgaactacatgtgc
cctctcaactcagacgggtatcctgacagcttggctttggccaacaacagcacattgaca
attggcactattgatgaaattcaaaagttgcatatacgcaccgttccgctttatgagtca
ccaaggaagatctgctatcaggaagtatcacaatgttttggtgtgctttccagtcgcata
gaggttcaggatgctagtggaggtaccactgcgttgaggccaagtgcaagcacccaggcc
ctctctagcagtgtgagttccagcaagttgttttctagcagtacggccccacatgagacc
tcatttggtgaggaggtagaggtgcacaatctgctcatcattgatcaacacacatttgaa
ggtactatatgtgaagtgcttcacgctcaccagttcctgcagaatgagtatgcgctaagt
ctggtctcttgcaaattgggcaaagaccccaacacgtacttcattgtgggcactgccatg
gtatatcctgatgaggctgaacccaagcagggccgtattgtggtgttccactattctgat
ggtaaattgcagacggtggctgagaaagaagtcaaaggagctgtctactcaatggtggaa
ttcaatggaaaactcttagccagcataaatagcacggtgcgtctgtacgagtggacagca
gagaaagagcttcgcacagaatgcaatcattacaacaatatcatggcactctatgtaaag
acgaaaggtgacttcatcttagtgggagatctaatgcgctccgtccttttgcttgcctac
aagccaatggaaggaaactttgaagagatcgctcgtgactttaatccaaattggatgagt
gctgtggagattttggatgatgataacttcctaggggcagagaatgcttttaacctgttt
gtgtgccagaaagacagtgctgccacaactgatgaggagcggcagcatctgcaggagttt
ggcctgttccatctgggcgagtttgtcaacgtcttctgtcatggttcactagtcatgcag
aatctgggtgaaacatccaccccaacgcagggttctgttctctttggcacagtcaatgga
atgattggcttggtgacttcattgtctgaaagctggtataacctcctcttggatgtacag
aacaggctgaacaaagtcattaagagtgtagggaagattgaacactccttctggagatca
tttcacacagaacgcaaaacagagccagctactgggttcattgacggagatttaattgaa
agctttttagacatcagccgacccaagatgcaggaggtggtagctaatctacagattgat
gatggcagtggaatgaagagggaggccacagtggatgacctgatcaagattgtggaggag
ctcacccgtatccactag
DBGET
integrated database retrieval system
