Pogona vitticeps (central bearded dragon): 110078409
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Entry
110078409 CDS
T05000
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110078409 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110078409 (FIP1L1)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110078409 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
110078409
NCBI-ProteinID:
XP_020648170
UniProt:
A0A6J0TM31
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MSAGGEVERLTADLSGAGAGDEEEEWLYGDENEELRPEETPASAQPPSGNEEEPAAENGV
VKTKVTEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQYGYGAAPVNLNIKTGGRSYGSSGA
KVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKR
IRMGLEILPVTSTTNKITAEDIAMEVTPGAEIPDGTYNLFKVQQGRTGNMEKEISLPPTK
AEFTSPPPLFKTGIPSNRNSTSSQSQTSTATRKASSGIGKWQERYGRAESPELRRLSGTI
DVIGQTITISRVEGRRRANENSNIQVLSDRSSTDVDSSFSKPPPFFPPGAPPTHLPPPPF
LPPPPSVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSARAFP
YGGVTFPHLTGSAPSWASLLDTSKQWDFYSRRDKDRERDRDRDRERDRDRDRDRERTRER
DRERDHSPTPSVFNSDEERYRYREYADRGYERHRTSREKEERHRERRHREKEETRHKSSR
SNSRRRHDSEEGDSHRRHKHKKSKKSKEGKETGGGEPAPEQENTDAAPAE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggcgaggtggagcggctgacggcggacctgagcggggccggtgccggg
gatgaggaggaggagtggctctacggcgatgaaaatgaagagttgaggccagaggagaca
cctgccagtgctcaacctccctctggaaatgaagaagaaccagctgctgaaaatggtgta
gtgaaaacgaaagtgacagaggctgaggatgatagcgacagtgatagcgatgatgatgaa
gacgatgttcaggtcactataggggatattaaaacaggagctccacaatatgggtacgga
gcagcacctgtgaatcttaatattaaaacaggaggacgatcttacggatcttctggggca
aaagtgaaaggagttgatcttgatgcaccaggaagtattaatggtgttccactattagaa
gttgatttggattcatttgaggataaaccttggagaaaaccaggtgctgatctctcagat
tatttcaattatggctttaatgaagacacctggaaagcatactgtgaaaaacaaaagagg
atacgaatgggacttgaaattttacctgttacctcaactacaaataaaatcacggccgaa
gacattgctatggaagtaactccaggggcagagattccagatggcacatacaatcttttt
aaggtgcagcagggcagaactgggaacatggagaaagaaatatcactaccaccaaccaaa
gcagagtttacatctcccccacccttattcaagacaggaatcccatcaaacagaaacagc
acctcttctcagtcgcagacgagcactgcaaccagaaaagccagttcaggcatcgggaag
tggcaggaacgatatgggagggctgagtcgcctgaactaagaaggctttctggtacgata
gatgtgattggacagaccatcaccatcagccgagtagagggaagacggcgggctaatgaa
aacagcaacatacaggttctttctgatcgctccagtactgatgtggacagcagtttttcc
aagccacctccatttttccctccaggagctcctcccactcatcttccaccacctcctttc
cttccaccaccaccatctgtcagcactgctcccccgctgattcctcctccaggtatacca
ataactgtgccaccgccaggttttcctcccccacctggaggaccaccaccttctctcata
ccgacaatagaaagtggacattcctctggttatgatagccgctcagctcgtgcatttcca
tatggtggtgtcacctttccgcaccttacaggttctgctccatcttgggctagtctcctg
gacacaagcaaacagtgggatttttattcaagaagagataaagacagagaaagggacaga
gatcgggacagagaaagggaccgtgatcgtgacagggatcgagaacgtactcgagaaaga
gaccgagagcgtgatcacagtccaactcctagtgtgttcaacagtgacgaggaacgatat
aggtacagagaatatgcagacagaggctatgaacgacatagaacaagcagagagaaggaa
gagcggcaccgagaaaggagacatcgagaaaaggaggagacgagacacaagtcatcacga
agtaacagtcggcgtcgccatgacagtgaagaaggggacagccacaggaggcacaaacac
aaaaaatcaaaaaagagcaaagaaggaaaagaaacaggtggtggcgaacctgccccagaa
caggaaaacactgatgctgcccctgcagaatag
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