Pogona vitticeps (central bearded dragon): 110079015
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Entry
110079015 CDS
T05000
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt04140
Autophagy - animal
pvt04148
Efferocytosis
pvt05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110079015 (VPS39)
04148 Efferocytosis
110079015 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110079015 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvt04131
]
110079015 (VPS39)
Membrane trafficking [BR:
pvt04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110079015 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
SAM_CEP-1_C
Hira
EcoR124_C
Motif
Other DBs
NCBI-GeneID:
110079015
NCBI-ProteinID:
XP_020649401
UniProt:
A0A6J0TLI6
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKETGEVASSESGCCNRF
EVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVPKAKGATLFTC
DLKHTETGEEVLRMCVAVRKKLQLYYWKDRDFYELQGDLSVPDVPKSMAWCEDSICVGFK
RDYYLIRVDGKGSIKELFPTGKQLEPLVAPLGGGKVAVGQDDLTVVLNEEGTCTQKCALN
WTDIPIAMEYQPPYIVAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIVYVASNHF
VWRLIPVSIATQIQQLLQDKQFELALQLADMKDDSDSEKRQQIHHIKNLYAFNLFCQKRF
DESMQVFAKLGTDPTHVMGLYPELLPSDYKRQLQYPNPVPVLSPAELEKAHLALIDYLTQ
KRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRL
ENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQY
LQHLGTENLNLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRRKVLNFLIENFKNLAIP
YLEHIIHVWEEPGSEFHNCLIQLYCEKVQGLMKEYLSSFPPDKTPTPAGEEEGELGDYRQ
KLLFFLETSSCYNAEQLISDFPFDGLLEERALLLGRMGNHEQALFIYVHILKDTKMAENY
CHKHYDRSKEGNKDVYLSLLRMYLSPPSVHCLGPIKMELLEPQANLQAALQVLELHHSKL
DTTKAINLLPANTQISEIKIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQV
KCIITEEKLCSVCKKKIGNSAFARYPNAVVVHYFCSKEVGTTDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccgatcctggagaagctgccgctgcagatcgactgc
ctggctgcctgggaggaatggctgcttgttgggacaaaacaaggacacctcctcctttac
agaattcgaaaggaaacgggagaagttgcgtcatcagaaagtggctgttgcaacaggttt
gaagtgactctagaaaaatcaaacaagaacttctctaagaagattcagcagatccatgtt
gtgtcccagtttaaaattttggtcagtttattagaaaacaacatttacgttcatgatctg
ttgacgtttcaacagataacaacagttcccaaggcgaaaggtgcaactctcttcacctgt
gacctgaagcacactgaaacaggggaagaggttctacggatgtgtgtggcagtacgaaag
aagttacaactctattattggaaggacagagacttctatgagctgcagggagacttgagt
gttcctgatgttccaaaatcaatggcatggtgtgaagattcaatttgtgtgggtttcaag
agggactattatctaataagggtggatgggaaaggatccatcaaagaacttttccctaca
ggaaagcagcttgagccattggtagcccctttgggaggtggcaaagttgccgtaggccaa
gatgatctgactgttgtgttaaatgaagaagggacctgtacgcagaaatgtgccttgaat
tggactgatatcccaatagctatggaatatcagcctccttatattgtggcggtactgccc
agatatgtagaaattcgtacttttgagccacgtctcctggtgcagagtattgagctacaa
agaccacgcttcattacttcaggaggtacaaatattgtttatgtggccagcaatcatttt
gtttggcgtcttattccggtttccatcgcaacccagattcaacagcttctccaagacaag
caatttgaattggctcttcagttggcggatatgaaggatgactctgacagtgaaaagcga
caacagattcatcacattaagaacctctatgccttcaaccttttttgtcaaaagcgtttt
gatgagtccatgcaagtctttgccaaacttgggacagatcctactcatgtgatgggtctc
tatcctgaactattgcccagtgattacaagaggcagctccagtatcctaatccagttcca
gttctgtccccagcagagcttgagaaagcacacctggcacttatagattacctaacccag
aaaagaagtcaactagtgaagaagctgaatgactcagaccaccagtccagcacttctccg
cttatggaggggacccccaccatcaaatccaaaaagaagttactgcagatcattgacacc
accctcttgaaatgctacctccatactaatgtagccctagtggcgccactgttgcgactc
gagaacaatcactgccatattgaggaaagtgaacatgtgctcaagaaagctcacaaatac
agtgaactgattatactatatgagaagaaaggtcttcatgaaaaagccttgcaggtgcta
gtggatcagtcaaaaaaggctaactcacctttgaaggggcatgagaggacggtgcagtat
ttacaacatttaggcactgagaacttgaatttaatattttcctattctgtttgggtgctc
agagacttccctgaagatggattgaaaatatttacagaagatcttcctgaggtggaatcc
cttccacgaagaaaggttctcaactttttaatagagaactttaaaaatttggctattccc
tacttggaacacatcatccatgtctgggaagagcctggttcagagtttcacaactgcctg
attcagctctattgtgaaaaagtacaaggcttaatgaaggaatatctcagctcttttcct
ccagataagacaccaacgccagctggagaggaggagggtgaactaggagactaccggcaa
aaactgctgttctttcttgagacatccagttgctataatgctgagcagctcatcagtgac
tttccctttgatggtcttctggaagaacgcgctctcctgttgggacggatgggaaaccac
gaacaagccctttttatatatgttcacatcctgaaagatactaaaatggctgagaactat
tgtcacaagcactatgacagaagcaaagagggcaacaaagatgtatacttgtctctgctc
cggatgtatctctcgccacctagtgttcattgtttgggaccaattaagatggaactattg
gagcctcaagctaatctccaggctgcactgcaagttttagaacttcatcatagcaagttg
gatactaccaaagcaataaatctccttccagcaaatactcaaattagtgagatcaaaatc
ttcctcgaaaaagttctagaagaaaatgcccagaagaagcgattcaatcaagtacttaaa
aaccttctccatgctgaattcttgagagtacaggaggaaaggattttgcatcagcaagtt
aaatgtataatcacagaagaaaagctctgcagtgtgtgtaaaaagaagattggaaatagt
gcctttgcccgctatcccaatgcagtagttgtacattatttctgttccaaagaagttggc
acgacagacacctga
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