Pogona vitticeps (central bearded dragon): 110079142
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Entry
110079142 CDS
T05000
Symbol
DDX42
Name
(RefSeq) ATP-dependent RNA helicase DDX42 isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110079142 (DDX42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110079142 (DDX42)
Enzymes [BR:
pvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110079142 (DDX42)
Spliceosome [BR:
pvt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110079142 (DDX42)
Complex B
110079142 (DDX42)
Complex C
U2 SnRNP specific factors
110079142 (DDX42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
ERCC3_RAD25_C
tRNA-synt_1c_C
Motif
Other DBs
NCBI-GeneID:
110079142
NCBI-ProteinID:
XP_020649633
UniProt:
A0A6J0TQ44
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MNWNKGGPGTKRGFGFGGFSISTGKKEEPKLPQQSHSAFGATGSSTGFGKTPPPQLPSFY
KIGSKRANFDEENAYFEDEEEDSNNVDLPYIPAENSPTRQQFHSKPPDSDSEDDPLEAFM
AEVEDQAARDMKRLEDKDKERKNTKGIRDDIEEEDDQEAYFRYMAENPNAGVVQEEEEDN
LEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYIEHEEITSLTPQQVVELRHKLN
LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTG
SGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAV
YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ
VRSIASHVRPERQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDITQIVEIFSS
GPNKWNWLTGRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHDLGLLHGDMDQSERNKV
ISDFKKGVFPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT
LLTHKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGY
RERPGLGSESSDRGSNNVMVNYEAYKPSSGAMGDRLSAMKAAFQSQYKSHFVAASFSNQK
TGSSSAGASGWTSAGSLNSVPTNSAQQNLANPDSPMSTTGIAKGIPGFTSAGNLNSIPSF
PSSGIQGFNNMNASNSTNRGEGSTGSRERYSDNRSSSRHSDSQRHGDGGSRHGDGQRHGE
GYRHGENRHGGDNHRHGESRHSGGGNSSSSRHGDNRNNGDSNESRNSEARNSESKKEGNN
SKTDGFAVPEPPKRKKSRWDS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaacaaaggtggcccaggtaccaagagaggctttggatttggtggcttctca
atatcaactgggaagaaagaagagccaaaacttcctcagcagtctcatagtgcttttgga
gccactggttcttcaactggatttgggaagacgccgccacctcagctgccttctttttac
aaaattggatcaaagcgagcaaactttgatgaggaaaatgcctactttgaggatgaggaa
gaagattccaataacgttgacttaccatatattcctgctgagaactctcctactcggcag
cagttccattccaagccacctgactcagacagtgaagatgatccattggaggcattcatg
gcagaagtggaggatcaagctgctagagacatgaagagactggaggataaagacaaggaa
agaaaaaatacaaagggtatacgcgatgatattgaagaggaagatgatcaagaagcttac
ttccgttatatggcagaaaaccccaatgctggtgtggttcaagaagaggaagaagataat
ctggagtatgacagtgatggcaacccaatagccccatccaaaaaaattattgaccccctt
cctcccattgatcattcagagattgaatacccaccatttgagaagaacttctacattgaa
catgaagaaattaccagtcttaccccacaacaagtggtggagctacgccataagttgaat
cttcgggtctctggtgctgcccctccaagacctggaagcagttttgcccattttggtttt
gatgagcagcttatgcaccaaattaggaaatcagaatatactcagcccacccctatccaa
tgccaaggtatcccagtagcactaagtggcagagatatgattggcattgcaaagactggc
agtggtaagactgcagctttcatttggcccatgttgattcatattatggatcagaaggag
ctggagccaggagacggtcccattgcagtgattgtatgtccaaccagggagctgtgccaa
cagatccatgctgaatgcaagcgttttgggaaggcctacaacctacgctctgtagcagta
tatggtggaggaagcatgtgggagcaagctaaggcactgcaggaaggagctgaaatcgtt
gtctgcactccaggccgcttgattgatcatgtgaagaagaaagcaactaaccttcagaga
gtcacttaccttgtatttgatgaagccgaccgaatgtttgatatgggttttgaataccaa
gttcgatcgattgctagccatgtgcgccctgaaagacagactctcctattcagtgcaact
ttccgcaagaagattgagaaactggccagagatattctcattgacccaattcgagtggta
cagggagacattggagaggcaaatgaagatatcactcaaattgtggagatcttctcctct
ggccccaacaagtggaactggctgaccggtcgcctggtggaattcacttcttctggtagt
gttctcctgtttgtcaccaaaaaggcaaacgcagaagaactggccaataatctcaaacaa
gagggccacgacctggggctgttgcatggtgacatggaccagagtgaacggaacaaagtc
atttcagatttcaagaaaggggtcttcccagttctggttgctactgatgtggcagctcgg
ggtctggatattccttccatcaagactgtaatcaactatgatgtggctcgtgatattgac
acccacacccaccgaattggtcgtactggcagagcaggggagaagggtgtggcctacaca
ttattgacccacaaggacagcaactttgctggagatcttgttcggaatttggaaggggcc
aatcagcacgtatcaaaagaactcctggacttagccatgcagaatgcctggttccggaaa
tcacgtttcaagggaggaaagggcaagaaactaaacattggtggcggtggcctggggtac
cgtgaacgtcctggacttggatcagagagttcggaccgtggcagtaacaatgtaatggtt
aactatgaggcctataagccatcttcaggagcaatgggagaccggttgtctgccatgaag
gcagcattccagtcccagtataagagccattttgtagctgccagctttagcaaccagaag
acaggcagctcctcagcaggggccagcggctggaccagtgccggcagcttaaactcggtg
ccaacaaattcagcccagcagaacttggcaaaccccgacagtcccatgagcactacaggc
atagcgaagggcatcccaggtttcacgagtgctggaaacttaaacagcatccccagcttt
ccaagctctggaattcaaggattcaacaacatgaatgccagcaacagcactaatagagga
gaaggcagcacagggagcagagaacggtacagtgacaaccgcagtagcagtcgccacagt
gacagccagcgccatggagatggtggcagtcgccacggtgatggtcagcgacatggggaa
ggctatcgccatggtgaaaaccgccacggcggggacaaccaccgtcacggtgaaagccgg
cattctggtggtgggaatagcagcagtagccgccatggtgacaaccggaataatggggac
agcaacgagagcagaaacagtgaagctcggaacagcgagagcaagaaagagggcaacaat
agcaagactgatggctttgctgttcctgaacccccaaagcgcaagaagagccgatgggac
agctaa
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