Pogona vitticeps (central bearded dragon): 110079393
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Entry
110079393 CDS
T05000
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110079393 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110079393 (DDX46)
Enzymes [BR:
pvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110079393 (DDX46)
Spliceosome [BR:
pvt03041
]
Complex A
U2 snRNP components
U2 related factors
110079393 (DDX46)
Complex B
110079393 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
110079393
NCBI-ProteinID:
XP_020650085
UniProt:
A0A6J0TSU6
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MGRESRSTKQQLSKQKQHYRKRSSSRGRSGSRSRSRSPSDKRVKRNDDRRSRSRERDRRR
ERSRSRDKRRSRSRDRKRVRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPGK
NKKVENRSRSKEKAEGVEVNKEKKKEKEDKEEEKDKDVNNFDQNKLEEEMRKRKERVEKW
REEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDDEETAEGEKEGNEIEDEELDPLDA
YMEEVKEEVKKFNMRSVKGGGGGANEKKSGPTVTKVVTVVKTKKASPETEKKKGELMVND
QDAMEYSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYEPYRKNFYVEVPELAKMTQE
EVNTYRSEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMS
GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKF
SKTLGVRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVL
DEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSV
VCSDVEQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLS
LHGGIDQYDRDSIINDFKSGVCKLLVATSVAARGLDVKHLTLVINYSCPNHYEDYVHRAG
RTGRAGNKGYAYTFITEDQVRYAGDIIKALELSGTAVPAELEKLWNDFKDQQKAEGKIIK
KSSGFSGKGFKFDETEEALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVK
DMASSGGTSNVPTPTAGNAEKLEIAKRLALRINAQKNLGAEAQVLVSFQFKDVMQQATNA
ILRGGTIQAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEIN
DFPQTARWKVTSKEALHRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQ
KAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggacgggagtccagatcaacaaagcaacagttgtccaaacaaaaacagcattatcgg
aagcgctcttcttcacgtgggcgctctggtagccgttctcggagtcgttctccatctgac
aaaagagtgaaacgcaatgatgatagacgttctaggagtagggaaagagatcgcagacgt
gagagatcacggagtagagataagagaagatctcgttcacgtgacagaaagcgtgtgagg
cgctcaagaagtagagagagagaacggagtagagagagaagacgttcacgtagtcgagag
agaagaaggtctagaagccgaagcagaggaagacggtccagatcttccagtcctggcaag
aacaaaaaagtagaaaacaggtcgcgatctaaagaaaaggcagaaggtgtggaagttaac
aaagaaaagaaaaaagaaaaagaggacaaagaagaagaaaaggataaagatgtaaataat
tttgatcagaacaaactagaagaggaaatgagaaaacgaaaagagagagttgagaaatgg
agagaagaacaacgcaagaaggccatggaaaatataggagaactgaagaaagaaattgag
gagatgaagcaggggaaaaaatggagtttggaagatgatgatgatgatgatgaagaaact
gcagaaggagagaaggaaggcaatgaaattgaagacgaagaactggatccattagatgca
tacatggaagaagtgaaagaagaagtcaagaagtttaatatgcgaagtgtaaaaggtggt
ggtggtggtgcaaatgaaaagaaatctggcccaacagttactaaagtagtaactgtggtg
aaaaccaagaaggcctctccagagacagaaaagaaaaaaggggagctcatggtgaacgac
caagatgcaatggagtattcctctgaagaagaggaagttgatcttcagactgcactgaca
ggctaccagaccaaacataggaaattgctggaaccagtggatcatgggaagattgaatat
gagccctacaggaaaaacttctatgttgaagttcctgagttagctaaaatgactcaagaa
gaggtgaatacctataggtcagaaatggaaggaattacagtcaaaggtaaaggatgtccg
aagccaatcaaaacctgggtgcagtgtggtatttctatgaaaatcttgaattccctgaaa
aaacatggctatgaaaagcccacccctatccaggcccaagctatacctgcaattatgagt
ggacgtgatttaattggcattgctaaaacaggaagtggaaagactattgcttttctgttg
ccaatgttcagacacattatggatcagagatcattagaagaaggagaaggtccaatagct
gttatcatgactcctacccgagaactagctttacagattacaaaggagtgtaagaagttc
tcaaaaactcttggggttagagttgtgtgtgtatatggaggaacaggaataagtgaacag
attgctgagctgaaaaggggtgctgaaataattgtttgcacaccgggccgtatgattgat
atgttagcagctaataatggtcgagtgacaaatcttcggagagtgacatatgttgtcctt
gatgaagctgatagaatgtttgatatgggctttgagcctcaggttatgcgcattgtagac
aatgtaagacctgatcgtcagactgttatgttctcagctacttttcctagagccatggag
gctttagctcgtcggatattaagtaaaccaattgaggtccaggttggtggcaggagtgtt
gtttgctctgatgtggaacagcatgtgattgtcatagaggaagagaacaagttcttgaag
ttacttgaattactaggacattatcaggaaaaaggatcagtcattatatttgtagataag
caagaacatgctgatggattactgaaagacttaatgagagcttcatatccatgcctgtca
cttcatggaggtattgaccagtatgacagagacagcataatcaatgactttaagagtgga
gtatgcaaacttcttgtggctacatctgtagcagcccgaggtctagatgtaaaacatctt
acacttgtaatcaattacagctgccccaatcattatgaggattatgtgcacagggctggc
agaactgggcgagcaggcaacaaaggatatgcatacactttcataactgaagatcaagta
cggtatgctggagatataattaaagctttggagttgtcaggtactgcagttcctgctgag
ctagagaagctgtggaatgatttcaaagatcaacaaaaggctgaagggaagataattaag
aagagcagtggattctctggtaaaggatttaagtttgatgaaacagaggaggctttggct
aatgaacgcaagaaactgcagaaagctgcacttggtttgcaggattcagatgatgaagat
acagcagttgatattgatgaacagattgaaagcatgttcaattcaaagaaaagagtgaaa
gacatggcatcctctggtgggacatctaatgttcctactccaactgcaggcaatgcagaa
aaattagagattgctaaaagattggcattgagaattaatgcacagaagaatcttggagcc
gaggcacaagtattggtctcttttcaatttaaggatgtgatgcagcaagctacaaatgct
atcctcagaggtggcactattcaggctccaactgtatctgccaagacgattgcggagcag
ttggcagagaagatcaatgccaagctcaattatgtgcccatagagaaacaagaggaagag
aaacaggaggggggacaaaatgaatcttttaagagatacgaggaagaactggagatcaat
gactttccacagactgcaaggtggaaagtaacgtcaaaggaggcattgcatagaataagt
gaatattctgaagctgcaattacaatcagaggaacttactttcctccaggcaaagagccc
aaagagggagagcggaaaatttacctggctattgagagtgccaatgaattggctgtgcag
aaagctaaggcagaaatcactcgacttatcaaagaagagctcatcagactgcaaaattcg
taccagcccaccaacaaaggaagatacaaagttttataa
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integrated database retrieval system
