Pogona vitticeps (central bearded dragon): 110079554
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Entry
110079554 CDS
T05000
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110079554 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvt03400
]
110079554 (MSH6)
DNA repair and recombination proteins [BR:
pvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110079554 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
110079554
NCBI-ProteinID:
XP_020650412
UniProt:
A0A6J0TQ56
LinkDB
All DBs
Position
Unknown
AA seq
1323 aa
AA seq
DB search
MSHQSNLLSFFPKTAKKGRENSPSDGEDYPHVSSGAPRSKRSRTRGVPTATDCDFCDFTP
GDLVWAKLEGYPWWPSLVYKHPTEGILFRGRGRASRIHVQFFDDDPSRGWVSIRYLRPYE
GSGGRDTQRGGMFYSSKPEIKRAMELADAAMQIDKSERLDLAVCDKPSESEEDDDEDTEQ
VSDEGDDFSATKELKHRNKRTAGRLQQDGKAKKRKVIDLDSDREGSDMDFKPDDASSDEN
SVGVDSESEKDPEKKAKRSINKVSPKQTQEKTYKPLQRDDLKIGRPETPVREVNLSSEIM
FKLESFAATGSCDYQPSLNGGGGDSIPAVWEHDKIEWLQDGKRKDAHRRRQNDPDYDPST
LFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGT
WAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVHRKVCR
IISKGTQTYSILDGDFSETHNRYLLCVKEKVSDSAGLCHTYGVCFVDTTVGKFYVGQFLD
DRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQEGLAAGSQFWNASKTLK
IFIEDGYFDDKENGNGRLALPPVIRSMTAENDSLGLTPAENSELALSALGGCVYYLKKCI
IDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQRMVLDGVTLANLEIFQNGTTGSVE
GTLLESIDTCCTPFGKRLLKQWICAPLCNPCAINDRLDAVEDLLTEAAKMSEIRDLLRKV
PDLERLLSKIHSIGSSLKNQNHPENRAVMYEEARYSKKKIIDFLSALEGFNVVVEIISIL
QDIVSGFKSKTLKQMVTVKSKNPEGRFPDLKAELDKWEAAFDHSTARKTGVVNPKPGFDI
DYDKALEDISDVEERLRKYLEEQRKRLGVRAMMYWGAGRNRYQMEIAESAVPRDLPDEYV
LKSSRKGYKRYWTKAIEKMLNDIVNAEERRDAAQKDCMKRLFYDFDRNSKDWQAAVECIA
VLDVLLCLAHHSQGCDGPLCRPVILLPEDNTPPFLELKRSRHPCIMKTFFGDDFIPNDIL
IGIEGEHPESKAPCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCFVPAESCRLTPVDRVFT
RLGASDRIMSGESTFFVELSETSSILQHATEHSFVLLDELGRGTATFDGTAIASAVVKEL
SENIKCRTMFSTHYHSLVEDYSHSPTVQLGHMACMVENESEDPSQETITFLYKFIKGACP
KSYGFNAARLANLPEEVIQKGHKKAREFERNIVALKLFRNLCRIAEGAPVSRDDLEKLTV
LYG
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatcagagcaacctcctcagcttcttccccaaaacggcgaagaaaggccgcgaa
aactcccccagcgatggcgaggactaccctcacgtctcgagcggagccccacggagcaag
cggagcaggaccagaggggtgcccacggccaccgattgtgacttctgtgactttacacct
ggagatttggtttgggccaaacttgaaggttacccatggtggccaagccttgtgtacaag
catccaacagaaggaatacttttcaggggtagaggaagagcatctcgcatccatgtacag
ttttttgatgatgacccatcaagaggctgggttagcattagatacttaagaccatatgaa
ggttctggtggtagagatacccagaggggaggtatgttttacagttcaaagcctgaaatt
aaaagagcaatggaattggcagatgctgcaatgcaaatagataaaagtgagcgacttgat
cttgcagtgtgtgacaaaccttcagaaagtgaggaagatgatgatgaagatacagagcag
gtgagtgatgagggtgatgatttttcagcgacaaaagagttgaaacatagaaataaaagg
acagctggacgactgcagcaggatggaaaagcaaaaaagaggaaggtcatagatttggat
agtgatcgtgagggttcagacatggattttaaaccagatgacgccagcagtgatgaaaac
agtgttggagtagatagcgagtctgagaaggacccagaaaagaaagcaaaacgttccatt
aataaagtttctcctaaacagacacaggaaaagacatataaacccctgcagagggatgat
cttaaaatcggtcgccctgaaactcccgtcagagaagtcaatctttcatctgagatcatg
ttcaagttggaatcctttgcagctaccggaagctgtgattatcagccaagtcttaatgga
ggcggaggagactctattccagctgtgtgggagcatgataaaattgagtggctccaggat
ggcaaaaggaaagatgctcataggagacgacaaaatgatcccgattatgatccaagtact
ctttttgtgccggaggattaccttagaaactgtactccaggaatgaggaagtggtgggag
ctgaagagtcagtactttgactgtgtgatcttctataaagttggaaagttctatgaatta
taccacatggatgctgttgttggagttaacaagcttggactggtgtttatgaaaggcaca
tgggctcactcaggtttcccagaaatagcctttgacaggttctctaatatcctggttgag
aaaggttacaaagttgtccgcgttgagcaggtagagacccctgaaatgatggaagcacgc
tgtagatccttggctcacccaacaaaatttgacagggttgtgcatcgaaaagtgtgcagg
ataatttccaaagggacacaaacctacagtatccttgatggtgacttttcagagacccac
aacagatatctcctttgcgtaaaagaaaaagttagtgattctgctggcctctgtcatacc
tatggggtatgctttgttgatacaactgtaggaaagttttatgtggggcagtttttggat
gatcgtcattcctcaaggcttagaactcttttggcccattatactcctgtgcagattctt
tttgaacgagggaatccttctgtagaaacacagaaagtatttaaaggcttactcccctcg
actgtgcaagaaggtttagctgctggctctcagttttggaatgcatccaaaacattaaaa
atcttcattgaagatggctacttcgatgacaaggaaaatggcaacggtagacttgctctg
cctccagtaatcagatccatgactgcagaaaatgattcactgggacttactcctgctgaa
aacagtgaacttgcgctctctgctcttgggggttgtgtctattaccttaaaaaatgcatt
attgacagggaaatcttatcaatggccaaatttgaagaatacattcctgtggatgtggat
attggaaagggaattaagtcacatagtatctttgctaaaacaagccaaaggatggtgctg
gatggagtaactctagcaaacctggaaatatttcagaatggaactactggttctgtagaa
ggcaccttgttagaaagtattgacacttgctgtacaccctttggaaagagactcctgaaa
caatggatctgtgcgccattgtgtaatccttgtgctatcaatgaccgtctagatgcagtt
gaagatctattaactgaggctgccaaaatgtctgaaatccgggatcttcttagaaaagtt
ccagaccttgaaaggcttttgagcaaaattcacagtattgggtcttcgcttaaaaatcag
aatcatccagaaaacagggctgttatgtatgaagaggcgaggtacagcaagaagaagata
atagatttcttatctgcattagaaggatttaatgttgtagttgaaatcatttcaattttg
caagatattgttagcggttttaaatccaaaacattgaaacagatggtgacggtcaaatct
aaaaatccagaagggcgtttcccagacttgaaagcagaacttgacaagtgggaggcagct
tttgatcacagcactgcacgaaagactggtgtagttaatccaaaacctggctttgacatt
gattatgataaagctctagaggatataagtgatgttgaagaacgccttcgcaagtatttg
gaagagcagcgcaaacgtctgggtgtcagagccatgatgtattggggtgcaggcagaaac
cgctatcaaatggaaattgcagaaagtgcagtgcctcgggatctgcctgatgaatatgtg
ttgaagtccagcagaaagggatataagcgttactggacaaaagccatagagaagatgctg
aatgacattgtcaatgctgaagaaagaagagatgcagcacaaaaagattgtatgaaaagg
ttattctacgactttgacagaaacagcaaagattggcaagcagcagtagaatgcattgca
gttctagatgtcctgttgtgtcttgcacatcatagtcaaggatgtgatggaccattgtgc
cgacctgtaatcttgctgccagaggacaacacaccaccttttctggagctcaaacgctcc
cgccacccgtgcatcatgaagacattctttggagatgacttcatccctaatgacattctg
ataggtatagaaggtgaacaccctgagagcaaagctccttgtgttctagtgaccggtccg
aacatgggaggcaagtcaacgcttatgagacaggctggcttgctggtgataatggcccag
ttgggctgctttgttcctgctgaatcttgcagacttactcctgttgaccgagtgttcacc
agattaggagcttcagatagaattatgtcaggggagagtacattcttcgttgagctgagt
gagacttcgagtattctacagcatgcaacagagcattcttttgttcttttggatgaatta
ggtagaggtacagctacttttgatggaactgccattgctagtgcagtcgtcaaagaactc
tcagagaacattaagtgtcgtacaatgttttcaacacattaccattctttggtagaggat
tattctcacagtccaactgtgcagttgggacatatggcatgtatggtagaaaatgagagt
gaggatcctagtcaagaaacaatcacgttcctgtacaagttcattaaaggagcttgccct
aaaagctatggctttaatgctgcaaggctagctaaccttcctgaagaggttattcagaaa
ggtcacaaaaaagcaagagaatttgagagaaacattgttgcattgaaattgttcaggaat
ctttgccggatagctgaaggagcaccagtgtctagagatgatcttgagaaactaactgtg
ctttatggctga
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