KEGG   Pogona vitticeps (central bearded dragon): 110079554
Entry
110079554         CDS       T05000                                 
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
  KO
K08737  DNA mismatch repair protein MSH6
Organism
pvt  Pogona vitticeps (central bearded dragon)
Pathway
pvt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110079554 (MSH6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvt03400]
    110079554 (MSH6)
DNA repair and recombination proteins [BR:pvt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110079554 (MSH6)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP
Other DBs
NCBI-GeneID: 110079554
NCBI-ProteinID: XP_020650412
UniProt: A0A6J0TQ56
LinkDB
Position
Unknown
AA seq 1323 aa
MSHQSNLLSFFPKTAKKGRENSPSDGEDYPHVSSGAPRSKRSRTRGVPTATDCDFCDFTP
GDLVWAKLEGYPWWPSLVYKHPTEGILFRGRGRASRIHVQFFDDDPSRGWVSIRYLRPYE
GSGGRDTQRGGMFYSSKPEIKRAMELADAAMQIDKSERLDLAVCDKPSESEEDDDEDTEQ
VSDEGDDFSATKELKHRNKRTAGRLQQDGKAKKRKVIDLDSDREGSDMDFKPDDASSDEN
SVGVDSESEKDPEKKAKRSINKVSPKQTQEKTYKPLQRDDLKIGRPETPVREVNLSSEIM
FKLESFAATGSCDYQPSLNGGGGDSIPAVWEHDKIEWLQDGKRKDAHRRRQNDPDYDPST
LFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGT
WAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVHRKVCR
IISKGTQTYSILDGDFSETHNRYLLCVKEKVSDSAGLCHTYGVCFVDTTVGKFYVGQFLD
DRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQEGLAAGSQFWNASKTLK
IFIEDGYFDDKENGNGRLALPPVIRSMTAENDSLGLTPAENSELALSALGGCVYYLKKCI
IDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQRMVLDGVTLANLEIFQNGTTGSVE
GTLLESIDTCCTPFGKRLLKQWICAPLCNPCAINDRLDAVEDLLTEAAKMSEIRDLLRKV
PDLERLLSKIHSIGSSLKNQNHPENRAVMYEEARYSKKKIIDFLSALEGFNVVVEIISIL
QDIVSGFKSKTLKQMVTVKSKNPEGRFPDLKAELDKWEAAFDHSTARKTGVVNPKPGFDI
DYDKALEDISDVEERLRKYLEEQRKRLGVRAMMYWGAGRNRYQMEIAESAVPRDLPDEYV
LKSSRKGYKRYWTKAIEKMLNDIVNAEERRDAAQKDCMKRLFYDFDRNSKDWQAAVECIA
VLDVLLCLAHHSQGCDGPLCRPVILLPEDNTPPFLELKRSRHPCIMKTFFGDDFIPNDIL
IGIEGEHPESKAPCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCFVPAESCRLTPVDRVFT
RLGASDRIMSGESTFFVELSETSSILQHATEHSFVLLDELGRGTATFDGTAIASAVVKEL
SENIKCRTMFSTHYHSLVEDYSHSPTVQLGHMACMVENESEDPSQETITFLYKFIKGACP
KSYGFNAARLANLPEEVIQKGHKKAREFERNIVALKLFRNLCRIAEGAPVSRDDLEKLTV
LYG
NT seq 3972 nt   +upstreamnt  +downstreamnt
atgtcccatcagagcaacctcctcagcttcttccccaaaacggcgaagaaaggccgcgaa
aactcccccagcgatggcgaggactaccctcacgtctcgagcggagccccacggagcaag
cggagcaggaccagaggggtgcccacggccaccgattgtgacttctgtgactttacacct
ggagatttggtttgggccaaacttgaaggttacccatggtggccaagccttgtgtacaag
catccaacagaaggaatacttttcaggggtagaggaagagcatctcgcatccatgtacag
ttttttgatgatgacccatcaagaggctgggttagcattagatacttaagaccatatgaa
ggttctggtggtagagatacccagaggggaggtatgttttacagttcaaagcctgaaatt
aaaagagcaatggaattggcagatgctgcaatgcaaatagataaaagtgagcgacttgat
cttgcagtgtgtgacaaaccttcagaaagtgaggaagatgatgatgaagatacagagcag
gtgagtgatgagggtgatgatttttcagcgacaaaagagttgaaacatagaaataaaagg
acagctggacgactgcagcaggatggaaaagcaaaaaagaggaaggtcatagatttggat
agtgatcgtgagggttcagacatggattttaaaccagatgacgccagcagtgatgaaaac
agtgttggagtagatagcgagtctgagaaggacccagaaaagaaagcaaaacgttccatt
aataaagtttctcctaaacagacacaggaaaagacatataaacccctgcagagggatgat
cttaaaatcggtcgccctgaaactcccgtcagagaagtcaatctttcatctgagatcatg
ttcaagttggaatcctttgcagctaccggaagctgtgattatcagccaagtcttaatgga
ggcggaggagactctattccagctgtgtgggagcatgataaaattgagtggctccaggat
ggcaaaaggaaagatgctcataggagacgacaaaatgatcccgattatgatccaagtact
ctttttgtgccggaggattaccttagaaactgtactccaggaatgaggaagtggtgggag
ctgaagagtcagtactttgactgtgtgatcttctataaagttggaaagttctatgaatta
taccacatggatgctgttgttggagttaacaagcttggactggtgtttatgaaaggcaca
tgggctcactcaggtttcccagaaatagcctttgacaggttctctaatatcctggttgag
aaaggttacaaagttgtccgcgttgagcaggtagagacccctgaaatgatggaagcacgc
tgtagatccttggctcacccaacaaaatttgacagggttgtgcatcgaaaagtgtgcagg
ataatttccaaagggacacaaacctacagtatccttgatggtgacttttcagagacccac
aacagatatctcctttgcgtaaaagaaaaagttagtgattctgctggcctctgtcatacc
tatggggtatgctttgttgatacaactgtaggaaagttttatgtggggcagtttttggat
gatcgtcattcctcaaggcttagaactcttttggcccattatactcctgtgcagattctt
tttgaacgagggaatccttctgtagaaacacagaaagtatttaaaggcttactcccctcg
actgtgcaagaaggtttagctgctggctctcagttttggaatgcatccaaaacattaaaa
atcttcattgaagatggctacttcgatgacaaggaaaatggcaacggtagacttgctctg
cctccagtaatcagatccatgactgcagaaaatgattcactgggacttactcctgctgaa
aacagtgaacttgcgctctctgctcttgggggttgtgtctattaccttaaaaaatgcatt
attgacagggaaatcttatcaatggccaaatttgaagaatacattcctgtggatgtggat
attggaaagggaattaagtcacatagtatctttgctaaaacaagccaaaggatggtgctg
gatggagtaactctagcaaacctggaaatatttcagaatggaactactggttctgtagaa
ggcaccttgttagaaagtattgacacttgctgtacaccctttggaaagagactcctgaaa
caatggatctgtgcgccattgtgtaatccttgtgctatcaatgaccgtctagatgcagtt
gaagatctattaactgaggctgccaaaatgtctgaaatccgggatcttcttagaaaagtt
ccagaccttgaaaggcttttgagcaaaattcacagtattgggtcttcgcttaaaaatcag
aatcatccagaaaacagggctgttatgtatgaagaggcgaggtacagcaagaagaagata
atagatttcttatctgcattagaaggatttaatgttgtagttgaaatcatttcaattttg
caagatattgttagcggttttaaatccaaaacattgaaacagatggtgacggtcaaatct
aaaaatccagaagggcgtttcccagacttgaaagcagaacttgacaagtgggaggcagct
tttgatcacagcactgcacgaaagactggtgtagttaatccaaaacctggctttgacatt
gattatgataaagctctagaggatataagtgatgttgaagaacgccttcgcaagtatttg
gaagagcagcgcaaacgtctgggtgtcagagccatgatgtattggggtgcaggcagaaac
cgctatcaaatggaaattgcagaaagtgcagtgcctcgggatctgcctgatgaatatgtg
ttgaagtccagcagaaagggatataagcgttactggacaaaagccatagagaagatgctg
aatgacattgtcaatgctgaagaaagaagagatgcagcacaaaaagattgtatgaaaagg
ttattctacgactttgacagaaacagcaaagattggcaagcagcagtagaatgcattgca
gttctagatgtcctgttgtgtcttgcacatcatagtcaaggatgtgatggaccattgtgc
cgacctgtaatcttgctgccagaggacaacacaccaccttttctggagctcaaacgctcc
cgccacccgtgcatcatgaagacattctttggagatgacttcatccctaatgacattctg
ataggtatagaaggtgaacaccctgagagcaaagctccttgtgttctagtgaccggtccg
aacatgggaggcaagtcaacgcttatgagacaggctggcttgctggtgataatggcccag
ttgggctgctttgttcctgctgaatcttgcagacttactcctgttgaccgagtgttcacc
agattaggagcttcagatagaattatgtcaggggagagtacattcttcgttgagctgagt
gagacttcgagtattctacagcatgcaacagagcattcttttgttcttttggatgaatta
ggtagaggtacagctacttttgatggaactgccattgctagtgcagtcgtcaaagaactc
tcagagaacattaagtgtcgtacaatgttttcaacacattaccattctttggtagaggat
tattctcacagtccaactgtgcagttgggacatatggcatgtatggtagaaaatgagagt
gaggatcctagtcaagaaacaatcacgttcctgtacaagttcattaaaggagcttgccct
aaaagctatggctttaatgctgcaaggctagctaaccttcctgaagaggttattcagaaa
ggtcacaaaaaagcaagagaatttgagagaaacattgttgcattgaaattgttcaggaat
ctttgccggatagctgaaggagcaccagtgtctagagatgatcttgagaaactaactgtg
ctttatggctga

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