Pogona vitticeps (central bearded dragon): 110079560
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Entry
110079560 CDS
T05000
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110079560 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvt03400
]
110079560 (MSH2)
DNA repair and recombination proteins [BR:
pvt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110079560 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
MCU
Ribosomal_L29
DUF7736
Motif
Other DBs
NCBI-GeneID:
110079560
NCBI-ProteinID:
XP_020650426
UniProt:
A0A6J0TPF9
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MGKHTLTRGRPRPPFYVAPLPRIRRRCPGRVIPLRASHEERGVATTSAEEETRGADWLLS
IKPSQVAARMLAGDFSMATLANSSGASSSSSSSSVREPCWPEGSAAESGFVRAVLALPGK
PETTVRFFERGDYYTVHGGDARLAAAEVFKTRGVIRLLGAGNHKLESVALSKMNFESFLR
NLLLVRQYRAEIYKNKTGNKSTRESEWYLAYKGSPGNLAQFEDILFGNHDMTSSVGVMGI
KVLSADGQKLVGVGFVDSLMRTLEVCEFPDNDQFSNLEALLVQMGPKECLLPSGESAGDM
EKLRLVLQRGGILITEKKKGDFSTKDIVQDLNRLLKSRRKERVSSAALPQMDKQIAISAL
SAVIKYLELLNDESNFGDFELSTFELHQYMTLDHAASRALNLFQGSSDVAQGTHSLAGLL
NKCKTAQGQRLVNQWIKQPLMDKKRVEERLNLVEAFIEDAELRQSLQEDHLRRFPDFSRI
VKKFQKKATLQDCYKIYQSVNQIPNVIQALEKSGGNHEVLLKTVFTGPLGELCSDFSNFQ
KMIDETLDMNTVETHEYLVKPSIDPNLAELRKNMDKLEGKLQGVLKAAAKDLSLEAGKSI
KLECNAQYGHFFRVTYREEKVLRNNLKYKVLETLKNGVKFYNSALKEINEEYIKIRKEYE
EMQEVVVKEIINVASGYKEPIQLLNDIIAHLDAVVSFAHASTVAPIPYVRPTILEKGQGG
IVLKGARHPCLEVQDDVAFIPNDVTFERNKQMFHIITGPNMGGKSTYIRQTGVIVLMAQI
GCFVPCESAEVTIVDSILARVGAGDSQLKGVSTFMAEMLETSSILRAATENSLIIIDELG
RGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALADQVPTVNNLHVTALTSEDTL
TMLYRVKKGACDQSFGIHVAEMAAFPKHVIESAKSKALELEEFQDIGKQEEAEEDEEPAA
KRCYKEKQQGEKIIQDFLSEVKAMSLSDMSDEDIRTKLKELKEEVVKHNNSFVNEIVSRI
KVAS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcacaccctaacacgtggccgcccacggccgccattttacgtagctcctctt
ccgcgtattagaagacggtgcccgggaagggtcattccgctcagagcatctcacgaagag
cggggcgtggctactacgtcggcggaagaggaaacgcggggagcggattggctgctctcg
atcaaaccatctcaggtcgcggcacggatgttggcgggagatttcagcatggcgaccctg
gcgaactcctccggcgcttcttcttcttcttcttcctcctccgtccgggagccctgctgg
cccgaaggctcggccgccgagagcggcttcgtgcgcgcggtgctggcgctcccagggaag
cccgagaccaccgtgaggttctttgagcggggcgattactacacggtgcatggcggcgac
gcgaggctggcggcggccgaggtcttcaagacacggggggtcatccggttactgggtgca
ggaaaccataaacttgagagtgttgccctcagcaagatgaattttgaatcttttttgaga
aatctgcttctggttcgtcagtacagggcagaaatatacaagaacaagacaggaaataag
tccaccagagagagtgagtggtatttggcatacaagggctctccagggaacctcgctcag
tttgaagatattctctttggtaatcatgatatgacgtcttctgtcggtgtcatgggcatt
aaggtgctctcagcagatggtcaaaagctggttggtgttgggtttgtggattctttgatg
aggacgctggaagtgtgtgaatttccagataatgatcagttttccaatctggaagctctg
ctggttcagatggggcccaaggaatgtctgttgccctctggagagtctgctggcgatatg
gagaaactgagactggtccttcaaagaggaggaattctgatcacagagaagaaaaagggt
gacttttcgacaaaagatattgttcaagacctgaaccgcttgctgaaatcaagaaggaaa
gagcgtgtgtctagtgcagctttgccccaaatggacaaacagattgccatttctgccttg
tctgcagtgattaagtatttagagctcttaaatgatgaatctaactttggggattttgaa
ctctccacctttgaactccatcagtacatgacactggatcatgctgcttccagagctctt
aaccttttccagggttcatcagacgttgcccaagggacgcattctttggctggattgctc
aacaagtgtaaaacggcacagggacagaggctggtgaaccagtggattaaacagcccctg
atggacaagaaacgagtagaagagaggctgaacttggtagaggcctttattgaagatgca
gagctccgacaatctcttcaagaagaccacctccgtcgcttcccagacttcagtcggatc
gtgaaaaagtttcagaagaaggctactctgcaggactgttacaaaatatatcagtccgtt
aatcagatacccaatgtaatacaggccctggagaaaagtggaggaaaccatgaagtgctt
ttgaaaaccgtgttcacaggacctcttggcgagctatgttcagatttctccaacttccaa
aagatgattgatgaaactttggacatgaatacggtggagacccatgaatatcttgtgaag
ccttccatcgacccaaaccttgctgagttgagaaagaacatggataagctagaggggaaa
cttcagggtgtgctgaaggcggcagcgaaggacctcagtttagaagccggcaagagtatc
aaattagaatgcaacgcgcagtatgggcattttttcagagttacctacagagaggagaag
gttttgcggaacaatctgaaatacaaagtcttggaaaccctgaagaatggggtgaagttc
tataacagtgcattgaaagagataaatgaagagtacataaagatcaggaaagaatatgaa
gaaatgcaagaagtcgttgttaaagagatcatcaacgtggcttctggttataaggaaccc
atacagctgctgaatgacatcatagcgcatctggatgccgttgtcagttttgcacatgca
tccactgtagcacccataccatatgtgcgcccaacaattctggaaaaggggcaagggggg
attgtgctgaaaggtgccagacacccctgccttgaagttcaagatgatgttgccttcatc
cccaatgatgtgacctttgagaggaacaagcagatgtttcatatcattaccgggccgaat
atgggaggaaaatcaacctatatccgacagactggagtgattgttcttatggctcaaatt
ggatgtttcgtgccatgtgaatcggccgaagtgactattgttgattctatcctggctcgt
gtaggagctggagatagccagctgaaaggtgtttctacgttcatggcagaaatgttagag
acgtcttccattcttcgggctgcaacagaaaactcactgattatcattgacgaattgggg
agaggaacgtctacgtatgacgggtttggattggcatgggcaatctcggaatacattgcc
accaaaattggagccttttgtatgtttgctactcatttccatgagctgacggcccttgct
gaccaagttccgactgtgaacaatttacatgtcacggcactaactagtgaagacaccctg
acaatgctgtaccgtgtgaaaaaaggggcttgtgatcagagttttggtatccatgtagct
gagatggctgcctttcccaagcatgtgatcgagagtgccaagtcaaaggctttggagtta
gaggaattccaggatattgggaagcaggaggaagcagaggaggatgaagaaccagcggct
aagagatgctacaaagagaaacagcaaggtgaaaaaataatccaggacttcctttctgaa
gtgaaagcgatgtcactgtcagacatgtcggacgaagacatcagaaccaaactgaaagag
ctcaaagaggaagttgtgaaacataacaacagctttgtgaatgaaattgtttcccgaata
aaagttgcttcgtga
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integrated database retrieval system
