Pogona vitticeps (central bearded dragon): 110079902
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Entry
110079902 CDS
T05000
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110079902 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110079902 (SF3B1)
03036 Chromosome and associated proteins [BR:
pvt03036
]
110079902 (SF3B1)
Spliceosome [BR:
pvt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110079902 (SF3B1)
Complex B
110079902 (SF3B1)
Complex C
U2 SnRNP specific factors
110079902 (SF3B1)
Chromosome and associated proteins [BR:
pvt03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110079902 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
110079902
NCBI-ProteinID:
XP_020651011
UniProt:
A0A6J0TR31
LinkDB
All DBs
Position
Unknown
AA seq
1302 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKN
RRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTERD
TPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGT
PAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYRVLPPPAGYV
PIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDV
DESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSP
TLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAK
AAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARH
TGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIE
SFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDE
EMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELAN
KVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQE
QTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVM
KTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTP
ILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFG
YIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELN
VQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGF
GCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVR
DVYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYVL
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcgcagattagagaaatccaaggc
aaaaaagctgcccttgatgaagctcagggtgtgggccttgattctacaggatactatgat
caggagatctatggaggaagtgacagcagatttgcaggatatgtaacttcaattgcagca
actgaactagaagatgatgatgatgactactcatctacaagcttgcttggccagaagaag
cctggataccatgcaccagtggcactgctcaatgacataccacagtcaacagaacagtat
gatccatttgctgaacatcgtccacaaaagatcgctgatagggaagatgaatacaaaaat
cgcagaaggatgatgattatatctcctgaacgtctagatccttttgcagatggagggaag
acacctgatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacagcattta
acaaaagaagagagggaaataagacagcaacttgcagaaaaggctaaggccggtgaactt
aaagtcgtgaatggtgctgcatcccagccaccatcaaaacgcaaacggcgttgggatcag
actgctgaccagactcctggtgccaccccgaagaaattatctagctgggatcaagctgaa
actcctggacatacgccatctctgcgatgggatgaaacgcctggccgtgcaaagggtagt
gagacacctggagcgacccctggatctaaaatatgggatccaactcctagtcatacacca
gcaggagccgcaacacctgggcgtggtgacacacctggtcatgcaacaccaggccatgga
ggcgcaacttccagtgcacggaagaaccgatgggatgagactcccaaaacagaaagagat
actcctggccatggcagtggctgggctgaaactcctcgtactgatagagggggtgattcc
attggtgaaacaccaactcctggagcaagtaaaagaaaatcacgttgggatgaaacgcct
gcaagccagatgggcgggagcactcctgtgttaactcctggcaaaacaccgattggtaca
ccagctatgaatatggcaactcctacaccaggtcatatcatgagcatgactcctgaacaa
cttcaagcatggcgatgggagagagaaatagatgagagaaatagacctctttctgatgag
gaactggatgccatgtttcctgagggctacagggttctcccacctcctgctggttatgtc
cctattcgtactccagcccgtaaacttacagcaactcccacacctctgggtggtatgact
ggattccacatgcaaactgaagatagaaccatgaagagtgtcaatgaccagccttcagga
aatcttcctttcctgaaacctgatgatatacagtatttcgataaactactggttgatgtt
gatgaatcaacacttagtccagaggaacagaaagagagaaaaataatgaaattgcttctg
aagataaagaatggcacccctccaatgaggaaggctgctttacgacagattactgataaa
gctcgtgaatttggagcagggcccctatttaatcagatcttaccccttttgatgtcacca
actcttgaagatcaagaacgtcatttgcttgtgaaagttattgacagaatcttatataaa
ctggatgacttggtccgaccctatgtgcacaagattcttgtggtgattgaaccattgctg
attgatgaagactactatgccagagttgaaggcagagagattatttccaacttggctaag
gctgctggactggcaacaatgatctctactatgcgacctgatattgataacatggatgaa
tatgttcgtaacacaacagctcgagcctttgctgtcgttgcctctgctctggggattcca
tctcttttgccctttttgaaagctgtgtgcaaaagcaagaagtcttggcaagccaggcac
acgggtatcaagattgtgcagcagattgctattctgatgggctgtgcgattttgcctcat
ctcaggagtttggttgaaattattgagcacggattggtggatgagcagcagaaagtacgc
accatcagtgctttggctattgctgctttagctgaagcagccactccctatggtatcgag
tcctttgattcggttctgaagcccttgtggaagggtatacgtcaacacagaggaaagggt
ctggctgcctttttgaaagctattggatatcttattccactcatggatgccgagtatgcc
aactactataccagggaagtcatgctgatccttatcagagagttccagtctcctgatgaa
gaaatgaaaaagattgtgttgaaggtagtaaagcagtgctgtggcacagatggtgttgaa
gcaaactacattaagacagaaatcttacccccatttttcaagcacttctggcagcacaga
atggcattggaccgaaggaattacagacagttggttgacacaactgtggagcttgccaac
aaagttggggcagcagaaattatttccaggattgtggatgatctgaaagatgaggctgag
cagtacagaaaaatggttatggaaaccattgagaagatcatggggaatctgggtgcagcc
gatattgatcataagctagaagaacagttgattgatggcattttgtatgcctttcaggaa
cagaccacagaggactctgtgatgttgaatggctttggtacggtggtcaatgctcttggc
aaacgagtgaaaccatacttgccccagatctgtggtacagttttgtggcgtttgaacaac
aagtcagccaaagtaagacagcaagctgctgaccttatatctcgaactgcagttgtaatg
aagacctgtcaagaggaaaaattgatgggacacttgggtgtagtactgtatgagtacctt
ggtgaagaatatcctgaagtattgggcagcattctaggagcacttaaagccattgtgaat
gtcataggtatgcacaaaatgactcctccaattaaagacctgctgccaagacttacacct
attctgaagaacagacatgaaaaggtgcaagaaaattgtattgacctggttggacgtatt
gcagataggggcgcagaatatgtttctgcaagagaatggatgaggatctgctttgaactg
ctagagttgctaaaagcgcataagaaagctattcgaagagcaactgtgaacacatttggt
tatattgcaaaagctattggaccccatgatgtgctggcgacattgctaaacaacttgaaa
gtacaagaaagacaaaacagagtgtgtactacggtagcaatagctattgtagcagaaaca
tgctcccctttcacagtgctgcctgctctcatgaatgaatacagagttccagagctgaat
gtgcaaaatggtgtattaaaatctctttccttcctctttgaatatattggagaaatggga
aaggactacatttatgctgtaacaccattgcttgaagatgcattaatggacagggacctt
gttcacagacaaacagctagtgctgtggtgcagcacatgtctcttggggtgtatggcttt
ggctgtgaagattctctgaatcacttgttaaattatgtgtggcccaatgtatttgagaca
tcaccccatgtcatccaagcagttatgggagccctggagggcttgagggttgctattgga
ccttgccgaatgttgcagtattgtttacagggcttgtttcatcctgccagaaaagtaaga
gatgtgtattggaagatctacaactctatctacattggttcacaggatgccctaatagca
cattatccacgaatctacaatgacgaaaagaacacctacattcgttacgaacttgattat
gtcttgtaa
DBGET
integrated database retrieval system
