Pogona vitticeps (central bearded dragon): 110080442
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Entry
110080442 CDS
T05000
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110080442 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110080442 (XAB2)
03041 Spliceosome [BR:
pvt03041
]
110080442 (XAB2)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110080442 (XAB2)
Spliceosome [BR:
pvt03041
]
Complex B
Other components
Prp19-related factors
110080442 (XAB2)
Complex C
110080442 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_12
TPR_8
ARM_TT21
ARM_TT21_C
TPR_15
RPN7
NRDE-2
TPR_1
LTN1_E3_ligase_6th
ATG1-like_MIT2
TPR_16
Motif
Other DBs
NCBI-GeneID:
110080442
NCBI-ProteinID:
XP_020652016
UniProt:
A0A6J0TTX7
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MPELETVLGKQELFFEEEDLQYEEEILRNPFSVKCWIRYIEFKQNAPKHILNLIYERALK
ELPGSYKLWYNYLKQRRKQVKSRCVTDPSYEEVNNCHERALVFMHKMPRIWLDYCQFLMD
QCRITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPENAEE
YIEYLRSIDRLDEAAVRLAAVVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKSLNVGA
IIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQF
EESMIAAKMETTSEMGREEEDDVDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHK
RVKLYEGKPREIINTYTEAVQTVDPFKATGKTHTLWVSFAKFYEANGQIEDARIIFEKAT
KVNYKQVDELASVWCEYGEMELRHENYDQALRILRKATAIPAKKAEYFDSSEPVQNRVYK
SLKVWSMLADLEESLGTFKVSXXXYDRILDLRIATPQIIINYGLFLEEHNYFEESFKAYE
RGISLFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPQKYAKTIYLLYAKL
EEEYGLARHAMAVYERATQAVLPSEQYDMYNIYIKRAAEIYGVTHTRSIYEKAIEVLSDE
HAREMCLRFADMECKLGEIDRARAIYSYCSQMCDPRTTANFWQTWKEFEIRHGNEDTIRE
MLRIKRSVQATYNTQVNFMASQMLKVYSNATGTVSDLAPGQSGMDDMKLLEQRAEQLAAE
AERDQPRAKEKILFVRSDASRSELAELSKQANPDEIDIDLDDGDESEDNEPDEVQLEQKS
VPSAVFGGLKDD
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctggaaacggtgttggggaagcaggagcttttcttcgaagaggaagatcta
cagtatgaggaggagatcttgcgtaatcctttctctgtcaagtgctggatccgctacatt
gaattcaagcagaatgcacccaagcatatcctaaacctaatctatgagagagctcttaag
gagttgccaggcagctacaagctatggtataattacctaaagcaacggcggaaacaggtg
aagagcaggtgtgtaacagaccccagctatgaagaggtgaacaactgtcatgagcgggcc
ctggtcttcatgcacaagatgcctcggatatggttggactactgccagtttctgatggac
cagtgtcggattacacgtacacgcaggacttttgaccgggcactccgtgccctgcccatt
acacagcatcatcgtatctggccactctatctgaagtttgtgcgcttatatccattacct
gagacagctgtacgggtctaccgtaggtacctgaagctgagcccagaaaatgcagaggaa
tatattgaatatctacgctccattgaccgtctggatgaggctgctgtccgccttgctgcc
gtggtgaacgatgaacgctttgtctccaaggagggaaaatccaattatcagctatggcat
gaactctgtgacctcatctcgcagaatccagacaaggtgaagtctctcaacgtgggagcc
atcatccgaggtggcttgactcggttcacggatcagttgggcaaactctggtgttccttg
gcagactactacatccgcagtggacattttgagaaggcccgtgatgtatacgaagaagca
atacagacagtgatgacagtgcgggatttcactcaggtctttgacagctatgctcagttt
gaagagagtatgattgcggctaagatggagaccacatcagagatgggacgtgaggaggaa
gatgatgttgatctggaactgcgtctggctcgctttgagcagctcattacacgtcggcct
ctgcttctcaacagtgtccttctgcgccagaatccccacaatgtccatgagtggcacaaa
cgggtgaagctttatgaaggcaaacctcgggagatcatcaacacatacacggaagctgtt
cagacagttgatcctttcaaagccactggaaagacacatacattgtgggtttcttttgca
aagttctacgaggccaatggacagatagaagatgcgagaatcatctttgaaaaggccacc
aaggtgaactacaagcaagtggatgaattggctagcgtgtggtgtgaatatggcgagatg
gagttgcgacatgagaactatgaccaagcgctgcgcattctgcggaaagccacagccatt
ccagctaagaaagcagaatattttgattcttcagaacctgtgcagaaccgtgtatacaag
tctctgaaggtttggtccatgttggctgaccttgaagaaagtctgggcactttcaaagta
agtnnnnnnnnntatgaccgcattctggacctgcgcattgccacccctcaaatcatcatt
aactatggcctctttctggaagagcacaactactttgaggagagcttcaaggcatacgag
agaggtatttcattgttcaagtggccgaatgtgtatgacatctggaatacctatctaacc
aaattcattgaccgctatggtggcaagaagttggagcgtgctcgggatctctttgaacag
gctctggatggctgtccccagaaatacgctaaaaccatctatttgctctacgccaaactg
gaggaggaatatgggctggcacgccatgccatggctgtgtatgagcgagccactcaagct
gtgctaccttcggagcagtacgacatgtacaatatctacatcaagagggcagccgagatc
tatggagtcacacacacacgtagcatctacgagaaggccattgaggtgttgtcagatgaa
catgcccgggagatgtgcctgcgctttgcggacatggagtgcaaactgggtgaaatagac
cgagcgcgggccatctattcctactgttcacagatgtgtgacccccgtactactgccaac
ttctggcagacatggaaagaatttgagatccggcatgggaatgaagataccatccgggag
atgctgcgcattaagcgaagtgtgcaggccacctacaacactcaagtcaacttcatggct
tcccagatgcttaaagtttacagcaatgctactggtacagtatctgatttggcgccaggg
cagagtggcatggatgatatgaagcttttagagcagcgggcagagcagctggcagctgaa
gcagagagagatcagcctcgagctaaggagaagatcctctttgttaggagtgatgcttcc
cgcagtgagttggctgaactctccaaacaggccaatcctgacgagattgatattgacttg
gatgatggagacgagagtgaggacaatgagccggatgaggtgcagctggagcagaaaagt
gttccttctgcggtgtttggaggacttaaagatgactga
DBGET
integrated database retrieval system
