Pogona vitticeps (central bearded dragon): 110080611
Help
Entry
110080611 CDS
T05000
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvt03037
]
110080611 (RTTN)
Cilium and associated proteins [BR:
pvt03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110080611 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
TPR_Trm732_C
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
110080611
NCBI-ProteinID:
XP_020652302
UniProt:
A0A6J0TVC1
LinkDB
All DBs
Position
Unknown
AA seq
2251 aa
AA seq
DB search
MDECAGAVLAAAAASPPLSQIELSLSPLIRKLRHQLAEIRERALKNILCKLEHNLITYVD
LVQEKLLFLNLLEWFNFPVVPMKEEVLSLVSNLVKHPSAVEHLIGIGAVEFFSQLRPNVD
PNLQAVIDGILDGLFMLPSEISSDYQAVSDEAQIFSVKGDAACVGYFHQGKNLQETGRPP
KQEAVKHGVKCLRFSTFPWLSLTTTDRHVLSSSESSLRSKNPKLIWNTCELLQDVIMQDF
PAEIFLQRPKIVQSLLSLTTLALGKDGQYNLALQAISCLQQLCVLLQNRLNFHRDPSFVS
SETGTVSQNSSVSYCQDARRHSHSQNPSPGSSSPRPSVIGRTGQRPRGDGQDWDAATSSG
SSSHANANSRISVPSPMNMGHIDLPELENEDTLDLQFQQLSLPQFCVAVLEYAVPLLRTG
SRRVTMQVLELLAEDLLLIVDSVSEDVWEDSTLFALELKEKLLGVLDILGETISYHRSNT
GSEQSTLIIVHHRMAFLSVSLFTVRLLQILLPVEKASNILPESLLIALFELSVDMPFSLE
YPNIHESVIAYLEQMNSESYNIYKQAAEIAYSIECTCNFMMDVRKEGEKSFVDLLELAEQ
ALKSLPYHQYFALLQELINLCSDIWKSAHASPLLQAESQKVLLHLLSHPLSNVRTEAYRC
CLKTIKECLGIHNITAPVSSASHRVHFLLHSKVLYEICSFGLQDSQHEVCSSATFILMYL
LQGRLMMAAVTWNKLLEALYPVVPVLQGYADTEEPLGNCILTLSETTAEKEGILPRTTRL
RAALRLLFSKKPLVRSMALKHLMFHLTVDEEVSLKRPLLQGSVLSSIPNLLIVEKPIELK
LSDARESVFKAETVEKLYDIFISDTIDLVLRKSAAEQLVVIMQDSKMHDIIKKRGVIDRI
LAYFAEFVDRDGEIMDCMMLPCLTLLRKIVYADPVKRLSLANQPCVLLSLFRVSLIFQDH
GAILSEAAALLCLLLFDEAARREMWADTVSCDSHNVPPFSLPVAIVRRYHLPVRISAHHA
VSPNSVVLPFPCEVWASKPVSGMLKLAWNLSWFSGSDNLLKLTNYEAETEKFLDTLKLSS
EDLITLRITRATSGMQDSLNSIIQAVSHREVRDAVTRMNFYVLNDRLAFTCSSGPCGAAL
KCLAWQTALSRFLQVLPASSEDEKLLADVICFLNKLLKEQKNISEAEHLKWILDVLLKDN
SKSLLDLIVQPESQAQEEIDDLKTAVRQQLQKELIAFFNILLVSFMSITDRKDKERTGYF
RTELALKLLQYLRVTDAPHFYGLPSLERTLRGMVHVTAFPGWSSYSVTMEPFMICKKYLA
GLLEVISSFYVEWGGNAMSFMGKGVTKSTILCLLHLSHEMMAQAPNVDWISLWYLPYDNS
EEQVCPRQSLAWLIPLWVDRDSEVKFTSLAIGSALTSVEVGCFALVESCRNISGGLWGTV
LNILLDKTECSMVRREAAFILQNLLVIPLPTEEVKDPIWQGPCVHDEEFGLSLTGKPALQ
ALLYHCHFYEHLNEMVKECYLGRYTFDLHCSSGDSLAAEKNSINDLDDSLSFWRLHYNQT
QTPSSRSTSETLITSSSPSLESAVELQAPPSPQSSSMHDMPVNRLTAQGQSDTTTTASLS
PHNSLQSIIRPNQCAVVTPPLLSAVCSLLDNLLIVTPEDTGTALQQAHTLTALSSLINPG
LIERCLLDIKAFLPQPSHMEYTKMQVLFLLQFVSSLSRLLQSCLLVDPGLVVRDDLLTPL
LKNTFVVLSIRSKDGLGPELSAAVHKAWEDLFRFLATLLRKCGHTSLVAVTAALSKHWTA
LIDTVCECVHLSVTHRDLYVTCLQFLAVLFSEEGKRELRNKEDNYCHPTVTFLLDKDERS
QPSVTKLSELLIQNYERTCFEDVMKRVAASALLLLLAVSRRAQKSALEANLIETCLEQMK
HIHAQLNLDSLRPGKALQRKKDDNLSKELNLIMQLLRNCFFQNEGCKAAAVGSHLISVLH
SLWPWLLMDDSLMQTTLHLLCVYTANYPSGCASLCVASGGLSPLQTAQRTATGNSLMHSV
VKLAFHTLAENNNIQQMTFNLLANLVISHDCKNVLQKNNFLQNFLSLSLPKGSNKSLSVV
AVAWLKLLLNLSFGEDGQQMIVKLNGSLEQLTELAKYKHRSNPCTILLILHNTCFSTANK
AKILANDKAIALLSSCLENDNLAARRIGASALWALLHNYQKAKVTLKNPSIKRRIDEAFV
SAKKNFQLQQESQQDAYYLKCLESLVQLLSS
NT seq
6756 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtgtgctggagccgttttggccgccgccgccgcttcgcctcctctttcccag
atagagttgtcgttgtccccgctcatccggaagctccgtcatcagctggctgaaattaga
gaaagagctctgaagaacattttgtgtaaactagaacataatttgattacatatgttgat
ttggtgcaagaaaagctgctatttctcaatcttttagagtggttcaactttcctgtggta
ccaatgaaagaagaagttctcagtttagtgagcaacttggtaaagcacccatctgctgta
gagcatttgattgggattggggcagtggaatttttctctcaactgcgtccaaatgttgat
ccaaatctgcaagctgtgattgatgggattctggatgggttgtttatgctaccttcagaa
atctcttctgactatcaagcagtatctgatgaagcccagatcttctcagtgaagggtgat
gctgcttgtgttggatactttcaccaagggaaaaatctacaagaaacaggaagaccacca
aagcaagaagccgtcaaacatggagtaaagtgcttgaggttttctacattcccttggttg
tctttgaccacaacagatagacatgttctgtcatcaagcgaaagctcactgagaagcaaa
aatcccaaattaatttggaatacctgtgagcttctacaagatgttattatgcaagacttt
cctgctgagatctttcttcagagaccaaagattgttcagagtcttctgtctctaacaacc
ttggctcttgggaaagatggacaatacaatttggccttgcaagccatctcatgcctgcag
cagttgtgtgtcttgttacagaacagacttaacttccacagagatccaagttttgtttca
agtgaaacaggtactgtttcccagaattcctcagtgtcatattgtcaagatgctagaaga
cattctcattcccagaatccatcccctggcagtagtagccctcgaccatccgtaatagga
cgcactggccagcgtcctagaggtgatggtcaagattgggatgcagcaacatccagtgga
agcagttctcatgctaatgcaaattccagaatatcagtcccatcgcctatgaatatgggt
catattgacttaccagaactggaaaatgaagatactttggatttacagttccagcagctt
agtctgcctcagttctgtgtagctgttttggaatatgctgtgcctcttctaagaacaggc
agcaggagagtgaccatgcaagtcctggaattgcttgctgaagatcttctgctcatcgtt
gattctgtatctgaagatgtttgggaagacagcactctctttgctctagaacttaaagaa
aaactgcttggagtcctagatatattaggtgaaacaatttcataccacagaagtaataca
ggttcagagcagtctacactcataatagtgcaccacagaatggcctttcttagtgtttca
ctttttacagttcgactactacaaattcttcttcctgtagaaaaggctagtaacattttg
ccagagagcttactgattgccctatttgaactttctgtggacatgcctttctccttggaa
tatccaaatattcatgaatctgtcatagcttatttggagcagatgaattcagaaagctac
aatatttataaacaagctgcagaaattgcctattcaattgagtgcacctgtaattttatg
atggatgttcgcaaggagggggaaaagagttttgttgatttattggagctagcagagcag
gcattaaaaagtcttccatatcatcagtactttgctctacttcaggagttaatcaatctt
tgctcagatatctggaagtctgcccatgctagcccattgctgcaggctgagagtcagaag
gtgcttctccatctgttgtcccatccgctgtcaaatgtaagaactgaagcctaccgctgc
tgcctcaaaactattaaggaatgcttaggaattcataatatcactgcacccgtttcttca
gccagccacagagtccatttcttgcttcattccaaagttctctatgaaatctgtagtttt
ggtcttcaggactcccagcatgaggtatgctcgtctgccacatttatactgatgtatctt
cttcagggccgattaatgatggcagcagtgacctggaacaagctccttgaggccctctat
cctgttgttccagtccttcagggttatgcagacacagaagaacctcttgggaattgtatc
ctcacactaagtgaaacaactgcagaaaaagaagggattcttccaagaacaactagactt
agggctgccttgcgtcttctattctcaaaaaagccattagtccgttccatggcactcaaa
cacttaatgtttcatcttacggttgatgaagaggtgagcctgaagcgtccactgctgcag
ggcagtgtcctttccagcattcctaacttattaattgtggaaaagcctattgaactcaag
ctaagtgatgcaagagagtcagtttttaaggctgagacagttgaaaaactgtatgatatt
tttatctcagacaccattgatctagtcttgaggaagtctgcagctgagcaattagttgta
attatgcaagattctaaaatgcatgacattataaaaaagaggggtgtgatagacagaata
cttgcttactttgctgaatttgttgaccgggatggtgagatcatggattgtatgatgttg
ccatgtcttacccttctacgtaaaattgtatatgcagatcctgttaaacgtctgtctcta
gctaaccaaccttgtgtcttgctttcgttatttagagtttccttgatattccaagatcat
ggtgccatcctgagtgaagcagcagccttactttgtctactactgtttgatgaagcagca
agaagagagatgtgggctgatactgtttcctgtgattcacataatgttcctccctttagc
ttgcctgttgctattgtgagacggtatcatctacctgtcagaatttctgctcatcatgct
gtgagccctaactcagtggtgttaccatttccctgtgaggtgtgggcttctaaacctgtg
tcaggcatgcttaaattggcttggaacttatcttggttcagtggaagtgataacttactg
aaactcacaaattatgaggcagaaacggaaaaatttttagacacattaaagctctcctca
gaggatcttattacactgaggataacacgtgcaaccagtggaatgcaagactctcttaat
tccatcattcaagctgtttcccacagggaagtaagagatgctgtcacaagaatgaatttt
tatgttctgaatgacaggctggcattcacgtgcagcagtggcccttgtggggccgctttg
aagtgcttggcttggcaaacagcattaagcaggtttcttcaggtgcttccagcttcctct
gaggatgaaaaacttctggctgatgtcatatgttttttaaacaagcttctcaaggaacag
aaaaatatttctgaagcagaacacctgaaatggatccttgatgtactcctgaaagacaat
tcaaaatctttgctagatcttatagtgcaaccagaatcccaggcacaagaggaaatagat
gatctaaagactgctgtcagacaacagctacagaaagaattgattgctttctttaatata
cttctggtcagcttcatgtccatcactgacagaaaagacaaagaacgtactggctatttc
cgaacagaactagccctgaaacttctgcagtaccttcgagtaacagatgcgccccatttc
tatggattaccttctttggaaagaacattaagaggaatggttcacgtcactgcatttcca
ggctggagttcatactctgtaacaatggagcccttcatgatttgtaaaaaatacctagca
gggcttcttgaggtcatttcatctttttatgttgaatggggaggaaatgccatgtctttc
atggggaaaggggtcacaaagagcaccatcctgtgtttgcttcacttgtcccatgaaatg
atggctcaggccccaaatgtggactggatatctctctggtacttgccgtacgataacagt
gaagaacaagtttgtcctcgacaaagcttagcttggctgattccattatgggtagacaga
gactcagaggtaaaattcacatcacttgcaataggatcggccctcacatcagtcgaagta
ggttgtttcgctttagttgaaagctgccgaaacatttcaggaggcttatggggaacagtg
cttaacatccttctagacaaaactgaatgtagcatggtccgaagagaggctgcatttatt
cttcagaatctgttggtgatcccgttgcccactgaagaggttaaagaccccatttggcag
ggaccttgtgtgcatgatgaagaatttggtctttctctgacaggaaaacctgccctgcag
gccctattatatcattgccacttctatgagcatttgaatgagatggtgaaagagtgctac
ctgggtcggtatacgtttgatcttcattgttcctcaggagacagcctggcagcagaaaag
aatagcataaatgaccttgatgactccctctctttctggagactccactataatcaaacc
cagactccaagttcccggtcaacatctgaaactctgatcacttcatcctcgccatctctg
gagtctgctgtggagctacaagcacctccctcaccacagagtagtagtatgcatgacatg
ccagttaatcgactcacggctcaaggccagagtgacacaaccacaacagcatctttgagt
ccacacaattccctgcagtctatcattagacctaatcagtgtgctgtggtcacaccccct
ctcctgtcagctgtgtgcagcttgctggacaacctactgattgtcactccagaagacact
ggaactgctcttcagcaagcacatacactaactgctctcagtagtcttataaatcctggt
ttgatagagagatgtctcttggacataaaagcatttttgcctcagccatcacatatggag
tacacaaaaatgcaggttctgtttctactgcagtttgtttcatcgttgtcccgactactg
cagtcttgcttgctggtagaccctggtcttgtggtgcgggatgacttactgacacctctc
ttgaaaaatacatttgtagttctttccattagatcaaaagatggcttaggacctgagtta
tcagctgctgttcacaaagcttgggaagacttattcagatttttggctacacttttaaga
aaatgtggccatacctctctagtagctgtgactgcagctctttccaaacattggacagca
ctaatagacacagtatgtgaatgtgtgcatctctctgtcacacaccgtgacctgtacgtg
acatgcctgcagttccttgctgttctcttttccgaagaagggaagagagagctccgcaat
aaagaggataactattgccatcccacagtgactttccttctagataaagatgagagaagc
cagccatctgtaaccaaactttctgaattactaattcagaattatgaaagaacatgtttt
gaagacgtgatgaaacgagttgctgcaagtgctttgcttctcctcttagctgtcagtaga
agagcgcagaaatctgctttagaagccaatctcatagaaacttgcttggagcaaatgaaa
catattcacgcacaactgaacttagattctctgaggcctggaaaagcacttcagagaaaa
aaggatgacaatctcagcaaagaattaaacctcatcatgcaactcctaagaaattgcttc
tttcaaaatgaaggctgcaaagcagcagctgttggaagtcaccttatctctgttctgcac
tctctgtggccatggcttttaatggatgactcattgatgcaaacaactctgcatttgctt
tgtgtctatactgcaaattatccttcaggctgtgcttctctttgtgtggcaagtggcgga
ttgtctccccttcagacagctcagagaactgcaactggaaactcgctaatgcatagtgtt
gtgaagttagcttttcacactcttgctgagaacaacaacattcaacagatgacttttaat
cttctggctaatctggttatatctcatgattgtaagaatgttcttcagaagaataacttt
ttgcagaactttttgtcgctgtcattgcccaaagggagtaataaaagcctcagtgtagtg
gctgttgcttggctgaagctgttgttgaatttgtcatttggagaagatggacagcaaatg
attgtgaagctgaatggtagtttagaacaacttacagagctggccaagtacaaacaccga
agtaatccgtgtacaattcttctgattctgcacaatacctgctttagcacagcaaacaaa
gccaagatactagcaaatgataaagctattgcattgctgtcttcctgtctggaaaatgat
aaccttgcagctcgaagaataggagcatctgcactatgggctttgcttcacaattatcaa
aaggcaaaagtgactttgaagaatccatcaataaaaagaagaatagatgaggccttcgtt
tctgcaaagaaaaattttcagttacaacaagaaagccagcaggatgcttattacttaaaa
tgtctggaaagccttgtgcaacttcttagcagttaa
DBGET
integrated database retrieval system
