Pogona vitticeps (central bearded dragon): 110081083
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Entry
110081083 CDS
T05000
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1 isoform X1
KO
K14406
cleavage stimulation factor subunit 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110081083 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110081083 (CSTF1)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110081083 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
CSTF1_dimer
WD40_Gbeta
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
PROPPIN
VPS8_N
Beta-prop_WDR11_1st
Beta-prop_HPS5
Frtz
Beta-prop_WDR75_2nd
DUF7099
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
110081083
NCBI-ProteinID:
XP_020653147
UniProt:
A0A6J0TXQ1
LinkDB
All DBs
Position
Unknown
AA seq
542 aa
AA seq
DB search
MTNRRIAPACDRWQLPWGMNNMVSPTNESRPTRLPFLESDPRLQSMCGNSMQQPVRRSGP
WPRLLPPPPPISHALPAQLPFDAVGPPTTISSSDRPRPKDELTAGRQPSLTMYRPKVSLK
DRQQLYKLIISQLLYDGYINIANGLINEVKPQSVCAPSEQLLHLIKLGMENDDSAVQYAI
GRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIATGSAD
ASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPTEQILA
SGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLYDVNTF
QCFVSCNPRDQHTDAICSVNYNASANMYVTGSKDGCIKLWDGVSNRCITTFEKAHDGAEV
CSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQVHRTQAVFNHTEDYVL
LPDERTISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRARFWYRRST
TD
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcgtcgtattgctccagcgtgtgataggtggcagcttccgtggggcatgaat
aacatggtctcgcctaccaatgaatcacgaccaacacgactaccatttcttgagtctgat
ccgcggcttcaatcgatgtgcgggaactcgatgcaacagcctgttcgacggagtggtcct
tggccccggttgctgccgccgccgccgccgatctcgcacgctttgccggcccaattgccg
ttcgacgctgtcgggcctcccacgaccatttctagctcggatcgaccaagaccaaaagac
gagctgactgctggaagacagccatcactcacaatgtatagaccaaaagtgagcctgaaa
gacaggcaacaactttacaagctgatcattagtcagttactatatgatggatatatcaac
attgctaatggtctgatcaatgaggtaaagccacagtctgtatgtgcaccctctgaacag
ctgttgcatcttattaaactgggaatggaaaatgatgatagtgcagttcagtatgcaatt
gggcgatctgatacagtggctcctggcacagggattgacttagagtttgatgcagatgta
caaactatgtctccagaagcttctgaatatgaaacatgttatgtcacatctcacaaagga
ccatgtcgtgttgctacatacagcagagatggacagttaatagctacaggatcggctgat
gcttcaataaaaatacttgatacagaaagaatgctggcaaagagtgcaatgcctattgag
gttatgatgaatgaaacagctcaacaaaatatggagaaccacccagttattaggactctt
tatgatcatgtggatgaggtgacatgtttagcttttcatccaacagaacaaatacttgcc
tcaggttcaagagattacacacttaaattattcgactattcaaaaccatctgctaaaaga
gccttcaaatacatacaggaagcagaaatgctgcgctcaatctcctttcatccttctggt
gacttcatacttgttggcacccagcatcctactctgcggctgtatgatgtcaatacgttc
cagtgctttgtttcctgcaatcctcgagaccagcatactgatgccatatgctcagttaat
tataatgcaagtgctaacatgtacgtaacaggcagcaaagatggatgcatcaaactgtgg
gatggtgtttcaaatcgttgtatcactaccttcgagaaagcgcatgatggagctgaagtc
tgttctgccattttctctaagaattccaagtatattctgtcaagtggaaaggactctgta
gccaaactgtgggaaatatctacagggagaacactggtcaaatatacaggagctggactg
agtggacgccaagtccacaggacacaggctgtcttcaatcacacagaagactatgtgctg
cttccagatgaaagaaccatcagcctctgctgctgggactcacgaactgctgaacgaagg
aaccttctttccttggggcataacagcatagttcgctgtattgtccattctcccaccaat
ccaggcttcatgacttgcagtgatgattacagagctcgattttggtatagaaggtcaacc
actgactaa
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