Pogona vitticeps (central bearded dragon): 110081225
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Entry
110081225 CDS
T05000
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03013
Nucleocytoplasmic transport
pvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110081225 (UPF2)
03015 mRNA surveillance pathway
110081225 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110081225 (UPF2)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110081225 (UPF2)
mRNA cycle factors
P-body specific factors
110081225 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110081225
NCBI-ProteinID:
XP_020653427
UniProt:
A0A6J0U0M8
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MPAERKKSTSMEEKETSLSNKDKEFSERRSMSSRDKPKEDVRLGVKRDMLKPPEDKKKKM
EEEKRKKEDKERKKKDDEKIKSEEEQKKKEEEEKQKLEEEEKKKQEEEVKRQQEEAAAQL
KEKEEAHQIHQEAWERHQARKELRSKNQNASDSRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFSGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLIPRKVKNAADKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPVPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQNRDCGKDDSRELKEAKENKDVSGTEDLELDLEHLDINDDALELDCGDEAE
DLTKKLLDEQGKKQGADSIGAENSDGKQAARKQEDEEASTGSHLKLIVDAFLQQLPNCVN
RDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVGTLHPCMSDVAEDL
CSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKSDTLHCLKMLLSDFSHHHI
EMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMIENAYYYCNPPPA
EKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWHDPEVKDYVICCMINIWNVK
YNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYN
YRMVESAVIFRTLYSFTSFGVNSDGTPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSKR
KLDCFLVYFQRYVWWKKSLDIWTKDHPFPIDIDYMISDTLELLRPKIKLCSSLEESVRQV
QELEREFLVKLGLVNDKESKDSVTEGENLEEDEEEEEGAVEIEEQSGNESEINEPEEEEG
SDNDDEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKRVPCAEDEDFIQALDKM
MLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGGGEGESESGDTMPFVMLTRKGNK
QQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPA
PANTNRERRPRYQHPKGAPNADLIFKTGGRRERGNRQRRS
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaagaaatcgacaagcatggaagaaaaagaaacatcactaagtaac
aaagataaggagttcagtgagaggcgatcaatgagtagccgagacaaacccaaagaggat
gtaaggcttggtgtgaaaagagacatgttaaaaccaccagaagataaaaagaagaaaatg
gaggaggaaaagcggaaaaaggaagataaggagcggaaaaaaaaagatgatgagaagata
aaatctgaggaagagcaaaagaaaaaagaggaggaggaaaagcaaaagcttgaagaagaa
gagaaaaagaagcaggaggaagaagttaaacggcaacaagaagaggcagctgctcagttg
aaggagaaagaagaggcccatcagatccaccaggaagcttgggaacgtcaccaagcgaga
aaggaacttcgaagcaaaaatcaaaatgcttcagacagtcgccctgaagagaatttcttt
agcaggctggattcaagcctcaagaaaaatactgcctttgtaaagaagttaaaaactatc
acagaacagcaaagagactccttgtctcatgatttcagtggcctcaacttaagcaagtat
attgccgaggctgttgcttcaatagtggaggcaaaactgaaaatatcagatgtaaactgt
gctgtgcatttgtgttctctgttccatcagcgttatgctgattttgctccatccctacta
caagtctggaagaagcattttgaagcaaggaaagaagagaaaacacccaacattactaaa
ctaagaacagacttgcggttcattgcagaattgacgatagttgggattttcactgataaa
gaagggttatccttaatctatgaacagctaaagaacattattaatgctgatcgtgaatcc
cacacccatgtttcagtggttatcagtttttgccggcattgtggagatgatattgctggt
ttgataccaagaaaagttaaaaatgcagcagataaatttaacttgagttttccgccaagt
gaaataattagcccggaaaaacagcaacctttccaaaatctgttgaaagaatacttcaca
tctttgaccaaacatctgaaaagggaccacagggaactacaaaatattgaaagacaaaac
aggcgtattctgcactctaaaggggagttgagtgaggatcgccataagcagtatgaagaa
tttgcaatgtcgtatcagaagttgttggcaaattctcagtctttagctgatcttctggat
gaaaatatgcctgatctcccccaggacaagccagtaccagaagaacacgggcctggcatt
gatatttttacccctggtaaacctggtgaatatgacttggaagggggcatctgggaagat
gaagatgctcgaaacttctatgaaaaccttattgatttaaaagcatttgtgccagctatt
ttgttcaaggataatgaaaaatgttcccagaacagggactgtggtaaagatgattctaga
gagttaaaagaagctaaggaaaacaaagatgtgtctggcactgaagatttggaattagac
ttagaacatctggatattaatgatgatgctcttgagttggactgtggggatgaagcagaa
gatcttacaaaaaaacttcttgatgaacaaggcaagaaacagggagcagatagcatcgga
gctgaaaatagtgacggaaagcaagctgcaagaaaacaagaagatgaagaagccagtact
ggatcacacctaaagcttatagtagatgctttcctacagcaacttccaaactgtgtaaac
agagacctaatagacaaggcagcaatggatttttgcatgaatatgaacacaaaagcaaac
agaaggaagttggttcgggctctctttatagttcctcggcaaagattagatttgttaccc
ttttatgcaaggctggttggcacattgcatccctgcatgtctgatgtagcagaggatctc
tgttccatgctcaaaggcgatttcagatttcacgtaagaaagaaggaccagatcaacatt
gaaacaaagaataaaactgtacgattcattggcgagcttacaaaatttaaaatgttttcc
aaaagtgataccctacattgcttaaagatgctcttgtctgacttctctcatcaccatatc
gaaatggcatgcaccctgttagagacatgtggtcgattcctcttcagatcgccagaatcc
catttaagaaccagtgttctgttggaacaaatgatgcgaaaaaaacaagcaatgcacctt
gatgcgcgctatgtcacaatgatagaaaatgcctactactattgtaacccccctccagct
gagaaaactgtgaaaaagaaacgcccacctctccaggaatatattcggaaactcctttat
aaggatctttccaaagtcactactgagaaggtcctgagacagatgcgcaagttgccctgg
catgatcctgaagtgaaagactatgttatatgttgtatgatcaatatctggaatgtgaaa
tataatagcattcattgtgtagccaaccttttagcaggtctggtactttaccaagaggat
gttgggattcatgtagtggatggtgttctagaggatattcgactaggaatggaggttaat
cagccaaagtttaaccaacggaggattagcagtgctaagttcctgggtgagctatataat
tacagaatggtagaatcagcagtaatatttcgaactctctactcatttacatcatttggt
gtgaactcagatggcactcctagcccacttgatcctccagaacatcttttccgaattaga
ctagtctgcaccatccttgacacttgtggacagtactttgacagggggtctagcaaacga
aagcttgactgcttcttggtgtatttccagagatatgtttggtggaagaaaagtctggac
atatggacaaaagatcacccgttccctatagacattgactatatgattagtgatacatta
gaactcctgagaccaaagataaaactctgcagttctcttgaagaatctgttaggcaggtg
caagaactggaacgggaatttttagtgaaactaggccttgtgaatgacaaagagtccaaa
gattcagtgacagaaggagaaaacttagaggaagatgaagaggaggaggaaggtgcagta
gaaatagaagaacagtctggaaatgaaagtgaaataaatgagcctgaagaagaggaaggc
tctgacaatgatgatgaagagggagaagaggaagaagaagaaaatacagattatctcaca
gattctaataaggagaatgagactgatgaagagaatactgaagtaatgattaaaggaggt
ggacttaagcgtgtcccatgcgctgaagatgaagatttcattcaggcattggacaaaatg
atgctggaaaatttacagcagaggagcggggagtctgtgaaagtacatcagttagatgtg
gcgattcccttgcatctcaagagccagctcaagaaaggtcccccgcttggtggtggggaa
ggagaatcggagtctggagacacgatgccttttgtcatgttaacaagaaaaggcaataag
caacagtttaagatcctaaatgtaccaatgtcttctcaactggccgctaatcattggaat
cagcaacaggctgagcaagaggagaggatgagaatgaaaaaactgacactggatatcaac
gaacggcaggaacaggaggactatcaggaaatgatgcagtccctggctcagcggccagct
ccagcaaataccaaccgagaacggcggcctcgttatcaacatccaaagggagcacctaat
gctgatctaatctttaaaacaggtggaaggcgcgagagaggtaacagacagcgtcgaagc
tga
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integrated database retrieval system
