Pogona vitticeps (central bearded dragon): 110081295
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Entry
110081295 CDS
T05000
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110081295 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvt03021
]
110081295 (SF3B3)
03041 Spliceosome [BR:
pvt03041
]
110081295 (SF3B3)
03036 Chromosome and associated proteins [BR:
pvt03036
]
110081295 (SF3B3)
Transcription machinery [BR:
pvt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110081295 (SF3B3)
Spliceosome [BR:
pvt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110081295 (SF3B3)
Complex B
110081295 (SF3B3)
Complex C
U2 SnRNP specific factors
110081295 (SF3B3)
Chromosome and associated proteins [BR:
pvt03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110081295 (SF3B3)
TFTC complex
110081295 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
110081295
NCBI-ProteinID:
XP_020653533
UniProt:
A0A6J0U0X8
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSRNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANTG
DDWHVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttataacctaactttgcagcgagccactggcatcagctatgccatccatggc
aacttttcaggtacaaaacagcaagagattgttgtttctcgggggaaaattttggaattg
cttcgtcctgatccgaatactgggaaggttcacaccttgctgacggtggaagtctttgga
attattcgttccctcatggcctttcgtttaactggtgggaccaaagactacattgtggtg
ggcagtgattcaggccgtatagtcatcctggaataccagccctcgagaaatgtgtttgag
aagattcaccaggaaacctttggcaagagcggctgccggaggattgttcctggacagtac
ctggccgtggacccgaaaggacgagctgtcatgatcagtgccattgaaaaacagaagctg
gtgtacattctgaacagggacgcagccgcccgactgaccatttcttctcctctagaagct
cacaaagccaacactttggtctaccatgtggttggagtcgatgtgggctttgaaaatccc
atgtttgcttgcctggaaatggattacgaggaagctgacaacgaccccacaggagaagca
gcggccaatacccagcagacgttgactttctacgagttagatctgggtttgaaccacgtg
gtcagaaagtacagcgaacccttggaggaacacggcaactttcttatcacagtccctgga
ggctctgatggtcccagcggggtgctgatttgttctgaaaactatatcacctacaaaaac
tttggagaccagccagatatccgatgtcccattcccagaaggaggaacgacttggatgac
cccgaaagaggcatgatctttgtctgttccgctacacacaagaccaagtccatgttcttt
ttcttggctcagacagagcagggcgatatcttcaaaatcaccttggagacagatgaggac
atggtgactgaaattcgactcaaatacttcgacacagttcctgtggctgctgctatgtgc
gtgctgaaaaccgggttcctctttgttgcttctgagtttggaaatcactacctctaccag
atagcccacctgggcgacgacgacgaggagcccgagttctcctcggccatgcccttggag
gagggggacaccttctttttccagccacggcccctcaagaacctcgtgctggtggacgaa
ctggacagcctctcccccatcttgtgctgccagattgccgatctggccaacgaagacaca
ccgcagttatacgtggcctgcgggaggggcccccggtcgtctctcagggttctcagacac
ggactggaggtgtctgaaatggccgtctcagagctgcccggtaaccccaacgctgtgtgg
acagtgcggaggcacgtggaagatgagtttgatgcctacatcatcgtctccttcgtcaac
gctaccctcgtcctttcgattggagaaacggtagaggaagtgacggactctgggttcctt
gggaccaccccgaccttgtcctgctcactgctgggggacgatgccttggtgcaggtttat
cctgacggcatccggcacatcagagcggacaaacgcgtgaacgagtggaagacgcccggg
aagaagaccattgtcaagtgtgcggtgaatcagaggcaggtggtgatcgcgctgaccgga
ggggagctggtctacttcgagatggacccgtcggggcagctgaacgaatatacggagagg
aaggagatgtcggcagacgtggtgtgcatgagcttggccaacgtccctccgggagagcag
cgttcccgcttcctggcggtcggcctggtggacaacaccgttcgcatcatttcgctcgac
ccctcggactgtctccagcctctgagcatgcaggccctcccagcccagcccgaatccttg
tgcattgtggaaatgggaggtgccgagaagcaggatgagctgggggagcgaggatccatt
gggttcctctacctgaacatcggcttgcagaacggtgtgttgctccggacagtgcttgat
ccagtcactggagacctttcggacacacggaccagatacctcgggtcgcggcctgtgaag
cttttccgagtccggatgcaaggccaggaagcggtgctggccatgtcgagccgttcgtgg
ctgagttattcctaccagtcccgcttccacttgaccccgctctcctacgagacgctggag
ttcgcttccggctttgcctcagagcaatgcccagagggcattgttgccatctcgaccaac
acgctgaggattctggcgctggagaagcttggggccgtcttcaaccaggttgcctttcct
ctacagtacacgcctcggaagtttgtgattcaccctgagagcaacaacctgatcatcata
gaaactgaccacaacgcctacacggaggccacgaaagcccagcggaagcagcagatggcc
gaggaaatggtggaggctgctggggaagatgagagggagctggctgccgagatggctgcg
gcatttctgaacgagaaccttcccgaatccatctttggggccccaaaggcagggaacggg
cagtgggcctctgtcgtccgagtgatgaaccccatccagggaaacacattggatctggtc
cagctggagcagaacgaagctgccttcagtgtagccgtgtgccgctttgccaacaccggg
gacgactggcacgtcctggtgggggtggccaaggacctgatcctgaatccccgctctgtt
gccggaggcttcgtctacacctacaagctggtgaacagtggcgagaaactggagtttctg
cacaagacccctgtggaggaggtgccggccgccatcgcgcccttccaaggccgtgtgctc
atcggcgtggggaagctgctgcgcgtctatgacttgggcaagaagaagctgctccggaag
tgtgagaacaagcacattgccaactacatctgcggcatccagaccattgggcaccgcgtg
atcgtgtcggacgtgcaggagagcttcatctgggtgcgctacaagaggaacgagaaccag
ctcatcatctttgcggacgacacccacccccgctgggtcaccactgcctgcctcctggac
tacgacaccgtggccggagcggacaagtttggcaacatttgcgtggtgaggctgccgcca
aacacaaatgacgaggtggacgaggatccaaccggcaacaaggctttgtgggatcgtggc
ctcctcaatggggcttctcagaaggcagaggtgatcatgaactaccacgtcggagagacg
gtgctttctctgcagaagaccaccctgattcctggggggtcggagtccctggtctacacc
accttgtctggaggcattggcatcctggtgcccttcacctcgcacgaggaccatgacttc
tttcagcacgtggagatgcacctgaggtctgagcatcctcccctctgtgggcgagatcat
ctcagcttccgctcctattacttccctgtcaagaatgtcattgatggcgatctgtgcgag
cagttcaattccatggaacccaacaaacagaagaatgtggccgaggagctggacaggacc
ccgccggaagtctccaagaagctggaggacattcgcacccgctacgccttctga
DBGET
integrated database retrieval system
