KEGG   Pogona vitticeps (central bearded dragon): 110081829
Entry
110081829         CDS       T05000                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
pvt  Pogona vitticeps (central bearded dragon)
Pathway
pvt03013  Nucleocytoplasmic transport
pvt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110081829 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    110081829 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvt03019]
    110081829 (THOC6)
   03041 Spliceosome [BR:pvt03041]
    110081829 (THOC6)
Messenger RNA biogenesis [BR:pvt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110081829 (THOC6)
Spliceosome [BR:pvt03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110081829 (THOC6)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WDR55 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta ANAPC4_WD40 Beta-prop_EML Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_RFWD3 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IP5PC_F Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_DCAF12 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_ACSF4 WD40_like WDR54 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 110081829
NCBI-ProteinID: XP_020654528
UniProt: A0A6J0U1D7
LinkDB
Position
Unknown
AA seq 332 aa
MTGFGMDIQRSLELLHMTIYSQSVSPCGKYLAAGNNYGEIAIFSLSAALSSEAKEESKKP
VVSFIAHEGPIYAMISTDRQLLSAGNGEVKAWNWSEIVKKGCKEAWSKRPPYGSSLEVPE
INSLQLNLKDNSLLMAGGDCVIRMMDLESGTFIHEYQGHTDYIHCLALREQLRECLSGSE
DGTVRLWDLRTKSQVQSIEVHKYEECSRPQYGKWIRCLATDSDWMVCGGGPALTLWHLRS
VTPTTVFPLPQCQQQVMFYQDLILSAGHSPSINHLQISGEVKAQIPCIPRCVHSLSINEH
SPEHKVLTAAGSSHRIDVFTNFGYRAFSLTFT
NT seq 999 nt   +upstreamnt  +downstreamnt
atgacaggatttgggatggatattcagcggtctcttgagctcctccatatgaccatctac
tcccagagtgtctcaccttgtggcaagtatttagcagcagggaacaactatggggagatt
gccatattcagcctctcggcagcattgagttcagaggctaaggaagaaagcaagaagcct
gtggtctcctttatagcccatgaaggcccgatctatgccatgatttccacagaccgccag
ttgttaagtgctggcaatggcgaagttaaagcttggaactggagtgagattgtgaagaag
ggttgcaaagaagcctggagtaaaaggccaccttatgggagcagtctggaggtgccagag
atcaacagccttcagctgaacctcaaggataatagtcttttaatggctggtggagactgt
gttattcgcatgatggatctggagtctggaacgttcattcatgaatatcagggccacaca
gactacatccattgcttggcccttcgggagcagctccgcgagtgcctatcaggcagcgag
gatggcacagtgcggctttgggatttacgtactaaaagtcaggtccagtccattgaagtg
cacaagtatgaggaatgtagccggccacagtacgggaagtggatccgttgcctggcaaca
gactctgactggatggtctgcggtgggggtccagcgctcactctgtggcacctccggtcg
gtcacccccaccactgtgtttcctttgccccagtgtcagcagcaagttatgttctaccag
gacctgattctctcagccggtcacagccccagcatcaaccatttacagatcagtggcgaa
gtgaaagcccaaatcccttgcattccacgttgcgtccactctctttccatcaacgaacat
tccccagagcacaaggtgttgacagctgccggaagcagccaccgcattgatgtcttcacc
aattttggctaccgggccttttccctcactttcacctag

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