Pogona vitticeps (central bearded dragon): 110082020
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Entry
110082020 CDS
T05000
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110082020 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvt01009
]
110082020 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pvt04515
]
110082020 (PCDH1)
Protein phosphatases and associated proteins [BR:
pvt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110082020 (PCDH1)
Cell adhesion molecules [BR:
pvt04515
]
Cadherins
Protocadherins
110082020 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Syndecan
Mid2
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
110082020
NCBI-ProteinID:
XP_020654877
UniProt:
A0A6J0U2L9
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MPGEERRARRKPRATPCWSLPLTLPRFRMQQLVSCLGLWLFLQLPCLSSGTRVVYKVQEE
QPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQQLF
PGEPCFLEFEVSITDLLNNSPRLLEGQIEVLDINDNTPNFASPVITLAIPENTNIGSLFP
IPLAMDRDAGANGVASYELMPGSDAQKLFGLQVAEDQDEKQPQLIVMGSLDREQSESYDL
TIKVQDGGSPPRASSALLRITILDMNDNAPKFEKPLYEAELSENSPMGHSVLQVKANDSD
QGANAEIDYSFHQASDMVRRLLRLDRGTGLITVQGPVDREDINVLKFSVLAKDKGANPKS
ARAQVVINVRDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETPVALVQVSDRDEGENA
VVTCVVAGDVPFQLRQASDTGSDSKKKYFLQTTTPLDYEAVKEYTIEIVAVDSGNPPLSS
TNSLKVQVVDVNDNDPVFSQSSTEVAFPENSSPDDLVVEVSATDADSGSNAKLVYSLVAE
PSSKGVFSIDPESGEIRVKTVLDREQRERYEFLVVAADKGSPSRKGTASVAINVMDRNDN
DPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENAFIQLSVEQDNGDFVIQNGTGTIL
SSISFDRERQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPVIISPSNASYKHILP
HTSPGQQVMSVGAEDIDSGTNAELQYSITGGNPFELFKISPQSGNITLEKEILRKHHGLH
RLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLETLVGHSLDTPIDIDIAGDPEYERSK
QRSNILFGVIAGIVAVTLVIVLVVLVRYCRQKEAKSGYQAGKKETKDLYAPKQGSKGNKA
KSKVKKSKSPKPPKPAEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHY
RSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDSNSTGSEQYSDYSYRTNPQKY
TNKQLPHRRVTFSAANQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHY
ERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNAL
KLSTFVPYQDRGSQEQVGNGSPRLSEERNTKMANLRLLPTYSAFSNSSHEPCKDSPMEEI
PLTQTSDFQTATTPSSQTAKREIYL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagaggagcggcgagcgcggagaaagccgcgggcgactccgtgctggtcgctg
ccactaaccctgccacggttcagaatgcagcagctggtttcctgcctgggcttgtggctc
ttcctccaacttccctgcctcagctctgggacacgtgtagtctacaaggtacaggaggag
cagccacccaacacacttatcggaagcttggcagcagactatggcttcccagatgtgggg
cacctgtataagctggaggtaggtgccccttacctgcgtgtggatggcaagactggtgac
atctacaccacagagacctccatagaccgggagagcctgcgagagtgccagcagctgttc
ccaggggagccttgcttcctggaatttgaggtttctatcacagacctgctgaacaacagt
ccacgcctgctggagggacagatagaagtgctggacatcaatgacaatacacccaacttt
gcctctcctgtaatcacactagccattcctgaaaacaccaatataggttcactcttcccc
attccactggccatggaccgtgatgctggtgccaatggtgttgcttcgtatgagttgatg
cctggttcagatgcccagaaactctttggcttgcaggtggctgaggaccaagatgagaaa
cagccacagctgattgtcatgggcagtctggatcgggaacagtcagagtcttatgaccta
accatcaaagtgcaggatggaggtagcccaccacgtgctagcagtgccctactgcgcatc
accattctggacatgaatgacaatgcacccaagttcgagaagcccttatatgaggctgaa
ctctcagagaacagtccaatgggtcactcagtcctgcaggtgaaggccaatgattctgat
cagggtgccaatgctgagatcgactattccttccaccaggcttcagatatggttcgccgg
ctgctgcgcctggacagaggcactggactgatcaccgtacaaggtcctgttgaccgagaa
gacatcaatgtgctcaagttctcagtgctggctaaagataagggagcaaatcccaaatct
gcccgtgcccaggtggtgatcaatgtcagggacatgaatgacaatgccccatctattgaa
atccgtggaattggcttggtcactcaccaggatggcatggccaatatctctgaagatgta
ccggtggagacacctgtagctctggtacaggtgtctgatcgggatgagggtgagaacgcc
gttgtgacctgcgtagtagctggggacgtaccttttcaattacgacaagccagcgatact
ggcagtgacagtaaaaagaagtattttctgcagacgacaacaccactagactatgaggca
gtgaaagaatatactattgagattgtcgctgtggattctggaaacccacctttgtccagc
accaactctctcaaggtacaggtggtagacgtcaatgacaatgatccagtttttagtcag
agctcaacagaggtggcctttcctgaaaacagttccccagatgacttggtggtggaagtg
agtgccactgatgcagacagtgggtccaatgctaagctggtgtactcgctagtagcagag
ccttcatcaaaaggtgttttctccattgatccagagtctggtgaaatccgggtgaagact
gtgttggaccgggagcagcgagagcgctatgaattcttggtggttgcagctgacaagggt
agccccagtcgcaaaggaactgcctcagttgccataaatgtcatggaccgcaatgacaat
gacccaaagttcatgctaagtggctacaacttctctgtcatggaaaacatgccaccattg
agtccagttggcatggtgacagtaattgatgctgacaaaggagaaaatgcctttattcag
ctctcggtggagcaggacaatggtgactttgtcatccagaatggtaccggcaccatcctc
tccagtatctcctttgaccgggagcgtcagagtacttataccttccgattaaaagctgtg
gatgggggtgaccctcccagatctgcttatgttggggtcactatcaatgtgctagatgag
aatgacaatgctccagtcatcatctctccatccaatgcctcctacaaacacattctacca
cacactagtcctgggcagcaggtcatgagcgttggagctgaagacattgattctggcacc
aatgctgagctgcagtacagcatcaccggtggaaatcccttcgagcttttcaagatttca
ccccagagtggaaacatcacattggaaaaagagatccttcgcaagcaccatggccttcac
cgcctggttgttcgtgtgaatgataagggcaagccttctcgtcatggcacagctttagtc
catttctacgtcaacgagacactggctaaccgcacccttttggaaaccctagtgggccac
agtttagacacacccattgacattgacattgctggtgaccctgaatatgagcgcagtaag
caacggagcaacattctctttggtgtcattgcgggcatcgtagctgtcaccctggttatt
gtgcttgtagtgctggtgcgctactgccgtcaaaaggaggccaaaagtggctaccaggct
ggcaaaaaggaaaccaaggacctgtatgctcccaagcaaggtagcaaagggaacaaagcc
aaaagcaaggtgaaaaagagcaaatctcctaagccacccaaacctgccgaggatgaggaa
gaaacaggactgcagaaatctctcaaattcaaccttatgaatgattcagtcagtgacagc
ccccgcatccacctgcccctcaattatccaccaggcagccctgacctgggccgccactac
cgttccaactctcctctgccttccatccagctccagccccagtcgccatctgcctcgaag
aagcatcaggtagtacaggacctgccagccaccaacacatttgtgggcactggggacagc
aattccacgggctcggagcagtattcagactacagctaccgtaccaaccctcagaaatac
accaataaacagttacctcatcgccgagtgacattctctgcagccaatcaagctcaagat
ctgcaagatccctcacagcacagttactatgacagtggccttgaggagtctgaaacacca
agcagcaaatcttcatcagggccccgcattggacccctggctctgcctgaggatcactat
gagcgcaccacacccgatggcagcattggggaaatggagcatcctgagaatgatctccgg
cctctgcctgacgtagccatgacagggacctgcacccgggagtgcacagagtttggtcac
tctgacacctgctggatgccaggtcagtcctctccaagccggcggcccaagaatgccctc
aaactctccacatttgtgccttatcaagacagagggagtcaagagcaagttgggaatggc
agccccagactctcagaagagcgcaacaccaaaatggctaacctccgcctgctccccaca
tacagtgccttctccaacagtagccatgagccctgcaaggactcccccatggaggaaatc
cctctcacccagacctcggacttccagacagcgactacaccgtcatcccaaactgccaag
cgggagatctacctgtga
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