Pogona vitticeps (central bearded dragon): 110082739
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Entry
110082739 CDS
T05000
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03015
mRNA surveillance pathway
pvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110082739
09123 Folding, sorting and degradation
03018 RNA degradation
110082739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110082739
03041 Spliceosome [BR:
pvt03041
]
110082739
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110082739
mRNA cycle factors
Stress granule specific factors
110082739
Spliceosome [BR:
pvt03041
]
Complex C
Other components
Complex C specific factors
110082739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
110082739
NCBI-ProteinID:
XP_020656212
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MDTAAASYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEEANKAVEEMNGKDINGKIVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSTKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANAILNQFQPAAGGYFMPAVPQAQSRP
TYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNTMRQSGPRPALRHLAPANNAQASRGLPGA
TQRIGVGAVAPNLAPRPPVAAQAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHLSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGIVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggacacggcagctgctagctacccgatggcctccctctacgtgggtgacctgcaccct
gatgtcaccgaagccatgctgtatgagaagttcagccctgcagggcccgtgctctccatc
cgtgtctgcagggatatgatcacccgtcgctctctaggatatgcttacgtcaacttccag
cagccagccgatgctgagcgcgctttggacaccatgaacttcgatgtgatcaaaggcaag
cccatccgcatcatgtggtctcagcgggatccttctctgaggaaatccggagtcgggaat
gtctttattaagaacctggataaatccatagacaacaaagcactttacgacaccttctcg
gcttttgggaatatcctctcttgcaaagtggtatgcgatgagaacggctcgaagggctat
gcctttgtgcactttgagacgcaggatgccgctgaccgggccatcgagaagatgaatggc
atgctgctgaacgaccgcaaagtatttgttggcagattcaaatcccgtaaggagcgcgag
gcggaactgggagctaaagcaaaggagttcaccaatgtctacattaagaactttggggat
gacatggatgatgaaaggctgaaggaactcttcagcaaatatggaaagaccctcagcgta
aaggtcatgacagacccgactgggaagtccaaaggtttcggctttgtgagctttgagaag
catgaagaagcgaacaaggcagtagaagaaatgaatgggaaggacatcaatgggaaaatt
gtgtttgtgggtcgtgcacagaagaaagtggaacggcaggcagaactgaagcgcaaattt
gaacagctgaagcaggaaagaatcagccgatatcagggtgttaacttgtatataaagaac
ctggatgacaccattgatgatgagaaactgaggaaagaattctctccttttgggtctatc
acaagcaccaaggtgatgctggaagagggacgaagcaaaggcttcggctttgtctgcttc
tcctccccggaggaagccaccaaagccgtaacggaaatgaacgggcgcatcgtgggctcc
aagccgctctacgttgccttggcccagaggaaggaggagcggaaggcccacctcaccaac
cagtacatgcagcgcattgccgggatgagggccctgccagccaacgcaatcctcaaccag
ttccagccagccgctggagggtatttcatgcctgctgtgccccaggctcagagcagaccc
acttactatgcacccaatcagatgacgcagatgagacccaacccgcgctggcaacaaggg
ggaagacctcaaggttttcaaggtatgccgaacaccatgcgccagtctgggccacggccg
gcattgcgccacctggctccggcgaataatgctcaggcctcacgtggcttgcctggggcc
acccaaaggatcggggtgggtgccgtcgcgccgaacttagcaccacgcccgccggtggct
gcccaggctccgagggcagtccccccctacaaatacgcctcaagtgtccgtagcccacac
ccagcagtacagccattacaggcccctcagcctgctgtccatgttcagggacaggagcct
ttgactgcctccatgctagctgctgctcctccccaagagcaaaagcagatgctgggagaa
cgtttgttcccgttgatccaagctatgcacctcagccttgcgggaaagatcacaggaatg
ctgcttgagattgacaactctgagttgctgcacatgctggagtctccggaatctctccgc
tccaaggtggaggaggcggtggcagtgctgcaggcgcaccaagccaagaaagaagcggcc
cagaaagtgggcatagttgctgctacctcctaa
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