Pogona vitticeps (central bearded dragon): 110082970
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Entry
110082970 CDS
T05000
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110082970 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110082970 (PRPF4)
Spliceosome [BR:
pvt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110082970 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
WD40_like
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
110082970
NCBI-ProteinID:
XP_020656634
UniProt:
A0A6J0UER1
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MATSRASSGGKTKASDDGDGPPAKKGPIFYGSLEEKERERLLKGESGMLGKDAVRAAIEA
GNINITSGEVFDLEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLF
GEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNTLKTARMWIA
SYSLPRAIKRLEEARMLKEVPEATRTSQKQELHKSLRSLNNFCSQIGDDRPISFCHFSPN
SKLLATACWSGLCKLWSVPDCNLVHTLRGHDTNVGAVVFHPKATISLDKKDVNLASCAAD
GSVKLWSLESDEPVADIEGHTVRVARVAWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQE
GHSKGVYDIAFHIDGSLSGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHI
ATGSGDNTCKVWDLRQRRCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKVWTHPGW
SPLKTLAGHEGKVMGLDVSLDGQLIATCSYDRTFKLWMAE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtcgcgggcctcctcgggaggaaaaaccaaagcttccgacgacggtgatggc
cccccagccaagaaggggccgattttctacggaagcctggaggagaaggagcgggaacgt
cttctcaaaggagagtccgggatgctggggaaggacgcggtcagagcagctatcgaggcc
ggcaacatcaacatcaccagcggggaagtcttcgacctggaagagcacatcagcgaacgg
caggcggaggtcctggcggaattcgagcgccggaagcgggccaggcagatcaacgtctcc
acggacgattcggaggtcaaagcctgcttacgggcccttggggagcccatcacccttttc
ggagagggtcccgcagagaggcgggagaggctacgtaacattctttcggtggtcggcact
gatgccttgaagaagaccaagaaagatgatgaaaaatccaagaaatcgaaagaggagtat
cagcagacctggtaccacgaggggccaaacaccctgaagacagccaggatgtggattgcc
agctattcgcttcctcgggcgatcaagcgactcgaggaagctcggatgctcaaagaggtc
cctgaggccacacggacatcccagaaacaggagctgcacaaatctctgaggtctctgaat
aatttctgcagccaaattggggatgaccggcccatctcgttctgccacttcagtcccaac
tccaagctcctggctacagcctgttggagcggactctgcaagctgtggtcggtgccagac
tgcaatctcgtccacactttgcgagggcacgacaccaacgtcggggcagtggtcttccac
cccaaagccaccatctccctggacaagaaggacgtcaacttggcctcgtgcgcagctgac
ggctccgtcaagctctggagtctcgagagcgatgagccggtggctgacatcgagggccac
accgtgagagtggcgcgggtggcgtggcacccctcgggcaggttcttgggcaccacctgc
tatgaccattcgtggcgtctgtgggaccttgaagcccaggaggagattctgcaccaagaa
ggccacagcaaaggggtttatgacattgccttccacattgacggctccctttctggcacc
ggcggccttgatgcctttggccgtgtgtgggacctacgcacagggcgttgtatcatgttt
ctggaaggccacctcaaagaaatctatgggatcaatttttccccaaacgggtaccacatt
gccaccggcagtggcgacaacacgtgtaaagtctgggatcttcgccagaggaggtgcatc
tacacaatcccagcccatcagaacctggtgacgggagtgaagtttgagccgaatcacggc
aacttcctgctcaccggagcctacgacaatacggccaaggtctggacgcacccaggctgg
tctcccctgaaaaccctggcagggcacgagggcaaagtcatgggcttggacgtctccctg
gacgggcagctgatcgccacctgctcttacgaccggaccttcaagctgtggatggcggag
tag
DBGET
integrated database retrieval system
