Pogona vitticeps (central bearded dragon): 110083135
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Entry
110083135 CDS
T05000
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110083135 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110083135 (CDC40)
Spliceosome [BR:
pvt03041
]
Complex C
Other components
Step II factors
110083135 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
110083135
NCBI-ProteinID:
XP_020656990
UniProt:
A0A6J0UCV2
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MNKVSYTYSLGSQPCCCVRRATSPRRPGDEYSTAHGGNPSSAAAASARPFLPGPHFRFAK
MSAAIAALASYGGSDSDSDSDAEGRPTRSAQVAGGDAVLHLTSPPPALAHQALVPVVDSA
PAVAVKEDVETGVHLDPSTKEVQYNPSYDTMFAPEFGPVNPFRTQQMAAPRNMLSGYTEP
AHINDFMFEQQRRTFATYGYALDPSIDNYEVPTKYIGSVEEAEKNQGLTVFETGQKKIEK
RKKFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQRELDEITAKRQKKGKHEDDKPGEE
KTILHVKDMYDYQGRSYLHVPQDVGVNLRSAVPPEKCYLPKKQIHVWSGHTKGVSAVRLF
PLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGSQFLSAAYDRYLK
LWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH
LGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLA
CQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDW
KTTKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtgtcgtatacttattcgctgggaagtcaaccctgctgctgtgtaaggaga
gccacctcgccgcgacggccaggtgatgagtacagcacagcgcacggagggaacccttct
tccgcggccgccgcgagtgcccgccccttcctgccggggccccacttccgcttcgccaag
atgtcggccgccatcgctgccttggcgtcgtacggcggctcggattcggactcggactcg
gacgctgaggggagacccactcgttcggcccaggtcgccggcggggatgccgtgctccac
ctgacctcgccgccccccgccctcgcccaccaggctctggtgcctgtcgtggattcggcc
ccggcagtggctgtgaaggaagatgtagaaacaggagttcacctcgatccatctaccaag
gaagttcagtacaatccaagctatgacactatgtttgcaccagagtttggaccagtgaat
ccatttaggactcagcagatggctgcacctaggaatatgctttctggatatacagagcca
gcccatattaatgatttcatgtttgaacaacagagaagaacatttgcaacttatggatat
gcattggacccctcaatagataattatgaggtacctactaaatatattgggtctgttgaa
gaagccgaaaagaatcaaggtctaactgtgtttgaaacgggacaaaagaaaatagagaaa
aggaagaaattcaaagagaatgatgcttctaatattgatgggttcttgggaccatgggca
aaatacgttgatgaaaaggaagttgcaaagccttcagaagaggagcaaagagaattagat
gaaataacagcaaagaggcaaaagaaaggcaaacatgaagacgataaacctggagaagaa
aaaactattttacacgtcaaagatatgtatgactatcaagggaggtcctatcttcatgtt
cctcaagacgttggcgtcaacctacgttcagcagtaccccctgagaaatgttatcttcct
aagaagcaaatccatgtatggtctggtcatacaaagggagtcagtgctgtcagactgttt
cctctttctggccacctgctgttgtcctgctctatggactgtaagattaagctctgggaa
gtttatggcgaacgaagatgcttacgaactttcattgggcacagtaaagctgtcagagat
atttgctttaacaatgctggaagccagtttctcagtgctgcatatgaccggtatcttaaa
ctctgggatactgaaacaggacagtgtatttcacgattcaccaacagaaaagttccatac
tgtgtgaaatttaatcctgatgaagataagcagaatctttttgtagcaggaatgtcagat
aagaaaattgtgcagtgggatattcgaagtggagaaatcgttcaggagtatgatagacat
ttgggtgctgtcaacaccattgtatttgtggatgagaatagacgatttgtgagtacatct
gatgacaaaagtttaagagtctgggagtgggacattccagtagatttcaaatatatagca
gagccaagtatgcactctatgccagcggtgactttgtccccaaatggaaaatggctggct
tgtcaatcaatggacaatcagattttgatttttggagctcagaacaggtttaggttgaat
aaaaagaagatcttcaaaggtcatatggtggcaggttatgcttgtcaagtggatttttcc
cctgacatgagctatgtgatatcgggtgatgcagatggaaagctgaacatctgggactgg
aagacgacaaagctctatagcagactaaaagcccatgacaaagtctgcataggtgcagtg
tggcacccgcatgaaacatccaaggtgatcacttgtggatgggatggcctcattaaacta
tgggactga
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