Pogona vitticeps (central bearded dragon): 110083293
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Entry
110083293 CDS
T05000
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvt04121
]
110083293 (TRIM50)
Ubiquitin system [BR:
pvt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110083293 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-B_box
zf-RING_UBOX
PRY
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-RING_5
TRIM_CC
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
DUF3375
Prok-RING_4
zf-RING_6
zf-Nse
OmpH
zf-C2H2_AcuF
ECM11
Exonuc_VII_L
Rootletin
zf-RING_4
DUF16
Trimer_CC
Sina_RING
Motif
Other DBs
NCBI-GeneID:
110083293
NCBI-ProteinID:
XP_020657306
UniProt:
A0A6J0U950
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MARKMSLDQLEDQLLCPICLEVFREPLMLRCGHSYCKTCVLSLSGDPEQPFLCPVCRKTV
DSGSSPPNVTLARIVEALQTAGGDDPGEESCPDHRNPLSLFCEQDRAVICGLCGSIGSHQ
HHKVTPVSTVYSRMKEELSTWVTEVQRQKRALDEHASKLVNNQTRIMNESDVFKWVVRKE
FQQLHRYIDEEKARFLAQIEREVARLVASIEAQLSQTADTLQKMKALGDSLEALNNEGQL
GFIRKYGSLPSRSDFASHPPAEGGAFSPVSFKPNFHPDDIQMLVWKRLLRKVLPAPEMLK
LNPASAHPLLELSKGNTVVNCGLFFQRRGSNPERFDDSNCVAASKGFSWGKHYWEVIVGA
KSRWRLGVMKATVSRKGKLPKSPEQGVWLIGLKEGKLYEAFASPRVALPLTTRPQRIGVF
LHYEKGELTFYNADSPDELVPLYTFQAEFQGKLYPVLDMCWPERGANTLPLILPTPKMLQ
GRDDGQGGEGGDDSPSAQEPTKL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcccggaaaatgagcctggaccagctggaggaccagctgctttgccccatctgcctg
gaggtcttccgggagcccctgatgctgcggtgcggccactcctactgcaagacctgcgtc
ctctcgctctcgggcgacccggagcagcctttcctttgccccgtctgccgcaagacggtg
gacagcggcagctcgccacccaacgtcaccttggcccgcatcgtggaggccctgcagacg
gcggggggtgacgaccccggcgaggagtcctgccccgaccaccgcaaccccctcagcctc
ttctgcgagcaggaccgggcggtgatctgtgggctgtgtggctccatcggctcccaccag
caccacaaggtcaccccggtctccaccgtctacagccggatgaaggaggagctgtccacc
tgggtgacggaggtgcagcgccagaagagagccctggatgagcatgccagcaagctggtg
aacaaccagacgcgcatcatgaacgagtccgacgtcttcaagtgggtggttcggaaggag
ttccagcagctccaccggtacatcgacgaggagaaggcccgcttcctggcgcagatcgag
agggaggtggcccgcctggtggcttccatcgaggcccagctgagccagacggcagacacc
ctccagaagatgaaggcgctgggggactccttggaggcactcaacaatgaaggacagctg
ggcttcatcaggaaatatggatcacttccatccaggtctgatttcgccagccacccccca
gccgaaggaggcgccttcagccccgtctcgttcaagcccaacttccacccggacgacatc
cagatgctggtgtggaagcgtctcctgcgcaaggtgctcccagcccccgagatgctgaag
ctcaacccggccagcgcccacccgctgctggagctctccaagggcaacacggtggtgaac
tgcggcctcttcttccagcgccgggggagcaacccggagcgcttcgacgacagcaactgc
gtggccgcctccaagggcttctcgtgggggaagcactactgggaggtcatcgtgggggcc
aagagccgctggcgcctgggcgtgatgaaggccaccgtcagccgcaaagggaagctgccc
aagagccccgagcagggcgtctggctgatcggcctgaaggagggcaagctctacgaggcg
ttcgccagcccccgggtggccctgccgctcaccacccgcccccagcggatcggggtcttc
ctgcactacgagaagggggagctgaccttctataacgccgacagtcccgacgagctagtg
cccctctacaccttccaggctgaattccagggcaagctgtacccggtgctggacatgtgc
tggccggagcggggggccaacaccctgcccctcatcctgcccacccccaagatgctgcag
ggccgggacgacggccagggcggggagggcggtgacgactcccccagtgcccaggagcct
accaagttgtaa
DBGET
integrated database retrieval system
