Pogona vitticeps (central bearded dragon): 110083960
Help
Entry
110083960 CDS
T05000
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110083960 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pvt00536
]
110083960 (COL3A1)
Glycosaminoglycan binding proteins [BR:
pvt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110083960 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
110083960
NCBI-ProteinID:
XP_020658565
UniProt:
A0A6J0UH75
LinkDB
All DBs
Position
Unknown
AA seq
1457 aa
AA seq
DB search
MMSCVQGAFLIFLAVWQSSVILAQQDVVLGACTHLGQVYADRDVWKPEPCQICVCDQGSV
LCDDIICDEQELDCPNPEIPFGECCPVCPQPTTPPPNPSGPVQQGPQGPRGDPGPPGTPG
RNGSPGLPGQPGTPGNPGPPGVCQNCPSVGGGQPQYESYDTKSGSGPYPLVPAAPGPPGL
PGPVGQQGPPGPPGYQGPPGEPGQAGSPGPVGPPGMIGPPGPSGKDGESGRPGRPGERGL
PGPPGHKGPSGMPGMPGMKGHRGFDGRDGAKGDAGAPGLKGENGLPGENGSPGPMGPRGQ
PGERGRPGLPGTAGSRGNDGSPGAAGQPGPPGPPGPSGFPGSPGFKGETGPSGPPGSSGP
PGPRGEPGPQGQTGGVGPPGPSGRDGSPGAKGLPGTAGISGPPGLSGARGPPGPPGTNGI
PGQRGPSGEPGKNGAKGEPGQRGERGENGTPGSAGPPGEEGKAGAPGQPGTNGLPGTPGE
RGAPGFRGPAGSSGPPGEKGAPGERGGPGSPGPRGIQGESGRDGSPGLPGMRGLTGSPGA
PGSDGKPGPSGPPGESGRSGPPGPAGPRGQPGVMGFPGPKGNEGAPGKNGERGSPGPPGG
QGIPGKDGESGAQGPPGPAGPTGERGEPGAIGPPGFQGLPGGAGPPGENGKPGEAGPRGE
NGAPGLPGSKGENGIPGERGGQGPPGTPGVRGGVGPAGPEGAKGPPGAPGPPGNMGPPGL
QGMPGERGGSGNPGPKGDKGEPGGRGGDGLPGKDGLRGPVGSIGPPGPAGQPGDKGESGP
AGPPGPTGARGGPGDRGEQGPPGPAGFPGAPGQNGEPGGKGDKGPAGERGEAGPPGAAGP
PGGPGSPGPAGPQGGKGERGSPGPPGQAGFPGSRGLPGPPGNNGSPGQPGNAGPAGKDGP
PGPSGSTGATGPPGAAGPKGEPGQPGEKGPAGARGEPGSPGPSGFPGPSGQRGIVGLPGG
RGLPGPAGLAGPRGEDGKPGTNGSPGERGPPGPQGPSGISGPPGESGRDGNPGSDGVPGR
DGSPGPKGDRGENGSPGLPGAPGHLGPPGAPGAAGKPGDRGQPGSAGPAGPAGPAGARGA
PGPAGPRGDKGEAGERGLNGIKGHRGFPGNPGPPGPSGALGPQGPNGSPGPAGARGPPGP
SGPPGKDGTSGYPGPIGPPGPRGNRGESGPAGIPGNTGPPGPPGQPGAPGPCCGGAEAAG
LQGFEKGPSYYRDQPPEDKIAMSDVITSLKSINNQIENIVSPDGSRKNPARNCRDLKFCH
PDLKSGEYWIDPNQGCKLDAIKVFCNMETGETCINATPGSVPQKNWWTSPGPEKKHIWFG
ESMNGGFQFSYGDPELPEEVADVQLAFLRILSSRASQNITYHCKNSIAYMDEASGNVKRA
LKLMSSTDSEIKAEGNNKFTYTVLEDGCTKHTGEWGRTVFEYRTRKTMRLPIVDVAPFDI
GAPNQEFGVDIGPVCFL
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctgtgtgcagggagcctttttgatcttccttgctgtgtggcaatcctcagtt
attttggcacaacaagatgttgtcctaggtgcatgtacccaccttggccaagtgtatgcc
gacagggatgtgtggaaaccagaaccatgccaaatctgtgtgtgtgaccaaggatctgtt
ctttgtgatgacatcatatgcgatgaacaggaattagattgccccaatccggaaattcca
tttggagaatgttgcccagtttgtccgcagccaacgacccctcctcctaatccttctggt
cctgtacaacaaggtcctcaaggccccaggggagatcctggtccacctggtactcctgga
agaaatggctcccctggtctacctggccagccaggaaccccaggcaaccctggaccgccc
ggagtctgccaaaactgccccagtgtcggtggaggacaacctcagtatgagtcctatgac
accaagtccggatctggaccgtaccctcttgtacctgcagctcctggcccacctggtctt
cctggtcccgttggtcaacaaggcccacctggaccccctggataccaaggtcctcctggt
gaacctggacaagctggcagcccaggccccgttggtccaccaggaatgattggtccacct
ggcccctctggaaaagatggagaatctggcagacctggcagacctggtgaacgtggattg
cctggccctcctggccacaagggtccatctggtatgcctggaatgcctgggatgaaaggt
cacaggggttttgatgggagagatggtgccaaaggtgatgctggtgctcctggtttaaag
ggtgaaaatggtcttcctggagaaaatggatcccctggaccaatgggtccaagaggtcaa
cctggtgaaagaggaagaccaggacttccaggaactgctggttctcgtggtaatgatggt
tctcctggagcagctggccaacctggccctccaggccctcctggaccttcaggatttcca
ggttctccaggtttcaagggtgaaactggcccttctgggcccccaggctccagtgggcct
cctgggccaagaggagaacctggtcctcaagggcagaccggtggcgttggtcctcctggt
ccttcaggacgtgatggaagcccgggtgcaaaaggtctaccaggcactgctggcatttct
ggccctccagggctaagtggagcccgtggtcctcctggcccacctgggacgaatggaatc
cctggacaaagaggcccatctggtgaacctggcaagaatggagcaaaaggcgagccagga
caacgaggtgaacgtggagaaaatggtacccccggttccgctggacctccaggggaagaa
ggcaaggctggagcaccaggccagccaggcacaaatggtttgcctgggaccccaggagaa
aggggtgcccccggtttccgtggtcctgctggtagcagtggacctcctggcgaaaagggt
gctcctggtgaacgaggtggtcccggaagtcctgggcctagaggaattcagggtgaatcc
ggtcgagatggaagccctggtcttccaggaatgagaggcttaacaggaagtccaggagcc
ccaggatcagatggaaaaccaggcccttctggcccgccaggagaatcagggcgaagtggt
cctccaggcccagcaggtccacgaggtcaaccaggtgtgatgggtttccctggtccaaag
ggtaatgagggtgcaccaggtaaaaatggagaaagaggttctcctggacctcctggagga
cagggtatacctggaaaggacggtgaatcaggagcccaaggtcccccaggacctgctggc
cctacaggtgaaagaggagaaccaggagcaatcgggcccccaggattccagggactgcct
ggcggcgcaggaccacctggagagaatggaaaacccggagaagcaggtccaagaggtgaa
aatggagcaccaggactcccaggatcgaagggtgaaaacggcatcccgggtgaacgaggc
ggacaaggtcctccaggaaccccaggagttagaggaggtgttggcccagctggaccagaa
ggcgcaaaaggtcctcctggcgcaccaggtccccctggcaatatgggaccaccgggattg
cagggaatgcctggagagagaggaggttctggaaatcctggacccaaaggggataagggt
gagcctggtggaagaggtggagatggtttacctgggaaagatggattaagaggtcctgtt
ggatccatcggaccccctggccctgctggccaacctggtgacaagggagagtctggccca
gctggtcctcctggcccaacaggtgcccgtggtggtcccggcgacagaggtgaacaaggt
ccccctggtcccgccggcttcccaggagctcctggacaaaatggagagcctggtggaaaa
ggtgacaaaggccctgctggtgaacgaggtgaagccggccccccaggggctgctggtcca
cccggaggccctggttcaccaggtcctgcaggtccacaaggaggaaaaggagaacgtggg
tccccaggccccccaggtcaggctggctttcctggaagtcgcggcttacctggtcctccg
ggtaacaatggtagcccagggcaacctggcaatgcaggccccgcaggcaaagacggccct
cctggtccctctggttctaccggtgctactggcccccctggtgctgcaggtccaaaaggt
gagcctggccagccaggtgaaaaaggtccagcaggtgcaagaggagaaccgggttcacct
ggtccttcaggatttccgggcccatctggacaacgtggtattgttggactgccaggcggg
agaggtttgcccggccctgctggtttagctggtccaaggggtgaagatggcaaaccagga
accaatggcagcccaggagaacgaggccctccgggaccacaaggtccctctggcattagt
ggacctcctggagagtcaggcagagatggtaaccctggatcagatggtgtgccaggtcgt
gatggatcaccaggaccaaagggtgatcgtggtgaaaatggttctcctggtctacctggg
gctccaggccatcttggtccccccggtgctcctggtgcagctggaaaaccaggcgacaga
gggcagccaggatctgctggtccagctggccccgctggccctgccggcgctcgtggtgct
cccggtcccgctggtccacgtggtgataaaggtgaagctggtgaacgtggtctcaatgga
atcaagggtcatcgaggattccctggtaacccaggaccccctggtccatctggggcattg
ggtcctcaaggtccaaacggaagcccaggacctgcaggtgctagaggtccccctggacca
agtgggccccctggaaaagatggaacaagtggctaccccggtcccattggcccaccaggt
cctcgtggaaacagaggcgaatctggtcctgcgggtatacctggtaacactggtcctcca
ggtcctcctggtcaacctggagctcctggtccttgctgcggtggtgctgaagctgctggt
ctccaaggttttgaaaaaggaccgtcctactaccgagaccagccacctgaggacaaaatt
gccatgagtgatgttataacttcactgaaatcaatcaacaaccagattgaaaacatcgtc
agccctgatggctcacggaagaacccagcccgcaactgccgagatctcaagttctgccat
cctgatcttaagagtggagagtactggatcgatcctaaccaaggttgcaaattggacgct
attaaagtattctgcaacatggaaactggagagacgtgcatcaatgccactccaggaagt
gtcccgcagaagaactggtggacaagcccagggccagaaaagaaacatatttggtttgga
gagtctatgaatggaggatttcagttcagctatggagatccagagcttccagaagaagtg
gcagatgttcagctggcattcctcagaatcctgtctagccgagcctctcagaatatcacc
taccactgtaaaaacagcatagcgtacatggacgaggccagtgggaatgtaaagagagca
ctgaaacttatgagttctactgacagtgagatcaaggcagaaggaaacaacaagttcaca
tacactgttctggaagatggctgtactaagcacacgggtgaatggggtagaacagtcttc
gagtacagaacacgcaagaccatgaggctgcctatagtagatgttgcacccttcgacatt
ggcgctcccaatcaggaatttggtgtggacattggcccagtttgcttcttataa
DBGET
integrated database retrieval system
