Pogona vitticeps (central bearded dragon): 110085022
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Entry
110085022 CDS
T05000
Symbol
TNRC6A
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6A protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
pvt
Pogona vitticeps (central bearded dragon)
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110085022 (TNRC6A)
03036 Chromosome and associated proteins [BR:
pvt03036
]
110085022 (TNRC6A)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110085022 (TNRC6A)
Chromosome and associated proteins [BR:
pvt03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110085022 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110085022
NCBI-ProteinID:
XP_020660477
UniProt:
A0A6J0UIK6
LinkDB
All DBs
Position
Unknown
AA seq
1918 aa
AA seq
DB search
MPFFQHLSGGPVNERPRDALRVLEAKATKEAERKLSRRLVLEVQEEQLMEERKKRKEDKR
KKEAAQKKAAEQKNKGSEPAKASVSQPLPVASATSPPTAAGGAGGNNNARRGVSNTQQLQ
SPQPSQPSVSRYPPREVPPRFRHQEQKQLLKRGQPLPGIAANLGSASKPLNGQAGGGSPG
AREPPAAAGEVQSSSQKQADLNHGTLGSHHEGSHWGTVSSSSDSSTNWDAVAVDGSGKEA
WPSVAAASDSELASECTDTDSASNSGSERNHVIMASRGQGGEVHSLRNGTGGLSAQAKLA
GVSSSSNNVAKGSISRSWGVGLGAAVSPCPVSAEVSNGTTEGSNSRKDADGWGVLSLPNG
DLNPSTLNSNGHHGAWPLMENSGPALKGPGGNSSSGGGGGGTSAGPPANPRGVNASLGNS
WGCLQESGHVNGTRKGSRGGQPLNPNLEVSGPNNNTTNFATSSLPNPASSGQTNEPAGSH
AGPGPWGGSANGGQPAPQASPVLNGTSVSHQSHAEGKNGGAPGTARGPSYSPSYSGDPGP
DPNSHATSDTVNASQRPLGLHGAGSSSSDISGEKGPGTWEGAGIGSPQTPTPWEQRGLGL
GLGGGQRGPAQGPPAAEGEWNKPPTNQPSCEGTGGSGKKFTSLWRPAEEEKAGADLQQSF
SASRVVEQNGKWTKPRTGDSEGRGEGPEDKAPPERKKADPQALLQSIVSRADLDPRVLSN
SGWGQTPIKQNTAWDTEMSPRGARKADNGTEAWGGWAGQASPSGGLAERHGPHGNGAPAG
AGWVDPKSVTRWGDPRGPGPQGRGEEGSAPAGLHHKGSQSWGGGGGGGGKEGRSSCPTWG
EAEKLKQGWGEASKAGPGWAVPPTDGWGGENLRSNHWGEVRKASSGSSDSDRSASGWKEP
SKPGPAPWSGGSAKPSATSSGWEEPATPCPSPGWGDPAKEEEATGWEEPSPESIRRKIEV
DDGTSAWGDPSKYNYKSVNMWNRNALHGGGPSDQQAPAPVPPPPPPPPPPSQLPQGLPSS
AAAAVEGGSSNSGWGEPAPAPATVDNGTSAWGKPVDTGTSWGETLGDATGGSAWVNDMPV
GRQASNRPGAKSMQVPEDWRGGDMPLTGSQPPSWEEEEDVEIGMWNSHAVQDTGSSLHWT
PSGSKKLPSKGTMKNGNKQDDMWMNPFVKQFANIGFPRELPEEMVQSNKMDLPGGLLPDK
WMEMEKHNLNAGEYGRVIGKALNSRPQISKESSMDRCPYFDKEGLVVADESQNVPFMSNP
NTKFPPSNSALPNPALGSVTGLSVPTLHSSRQNGNPSALGNPAAQSRSLLLQQQPPAPPP
LNTSQPNPRAQVPPPLLSPQVPVSLLKYAPNSGGLSPLLGPQHVAMLNQLSQLNQLSQIS
QLQRLLTQQRKVQSQRNMSAGGRQQQEQQSRSLNMQQQMMQPSCQLDPNLLLKQQQQQQL
HQSTFVKSFLENAVPPQANAELPKGPPQTNAFSSFPIGLNSNLNVNMDVGSIKEPQSRLR
KWTTVESISTNTSLDQNASKNGAISGGFRLEDSAFVPYDFMDSSSSPASPPGSIGDGWSR
AKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYITPGSVTNNLSIHTVREXXXXXXRX
ACPPSSPSRPFSSPPPCPPPQGTDLGPQLACFLPARNSDSRSAWSPASLNNTSLAHELWK
VPLPPKSVAAPSRPPPGLTGQKGPLSAWENSVRLSGGGGWSNADARYTPGSSWGESSSGR
ITNCLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRYSSKEEVIKAQKSLHM
CVLGNTTILAEFASEEEVSRFFAQGQSLTPSPAWQSLGTSQNRLGSVEGSHSFPNRSDLN
QHWNSAGLSGSSGGDLHGASLWGGSTGYSSSLWGSLGGPSPLNAFLSVDHLGAAGESM
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgccctttttccagcacctttcgggagggccagtaaacgaaaggccgcgtgatgccttg
agagtgttggaagccaaagctaccaaagaagcagaaagaaaactaagcaggagattagtg
ctagaagtgcaggaagaacagttgatggaagaaaggaaaaagaggaaggaggacaaacga
aagaaagaagctgctcagaagaaggctgctgaacaaaaaaacaaagggtctgaaccagca
aaggccagtgtaagccagccacttcctgttgcctctgcgaccagtcctcccaccgcagcc
ggcggcgctggtggcaacaacaatgccagacggggggtcagcaacactcagcagctgcag
tcgccgcaaccgtcgcagccgtccgtgtctcgctacccgccccgtgaagtcccgccccgg
ttccggcatcaggagcagaagcaactgttgaagcgaggccagccgctcccggggatcgcg
gccaacctggggtcagcctctaaaccgctgaacggccaggcaggaggagggagcccagga
gccagggagccacctgcagctgccggagaggtgcagagcagcagccagaaacaagcagat
ctgaaccacggcacgctcggatcccatcatgagggttctcactggggaacggtctcttcc
agtagtgactccagcacaaactgggatgcggtggctgtagacggttcaggaaaggaggcc
tggccctccgttgctgccgccagcgactcggagctggcttcagaatgtacggacactgac
tctgcctcgaactccgggtccgagaggaaccacgttatcatggcctccaggggccaaggc
ggggaagtccacagcctgcggaatggcaccggtggactcagcgctcaggccaagctggcc
ggcgtcagcagcagcagcaataatgtggccaaagggagcatcagccggtcgtggggagtc
ggcctcggtgccgccgtgagcccctgcccggtctctgcggaggtttcgaacggcacaacg
gaaggtagcaacagcagaaaggatgctgacggttggggcgtcctcagtttacccaacgga
gacctaaatcccagcactttgaattccaacggccaccacggtgcctggcctctcatggag
aacagcgggcctgccttgaaagggccgggaggaaacagcagcagcggcggcggtggtggc
ggcacaagcgctggcccgccagccaaccctcgtggcgtgaacgccagccttggcaactcc
tggggctgcctccaggaaagcggccacgtgaacggtacacggaaggggtcgcggggcggg
cagcccctcaacccgaaccttgaagtgagcggaccaaataataacactactaactttgcg
acctctagtttaccaaaccccgccagttcagggcagacaaatgaaccggccggcagccat
gcagggcccgggccctggggggggagtgccaacggcggccagccggcaccccaggcctct
ccggtcctcaacggcacttccgtttctcaccagagccatgccgaaggaaagaacggaggc
gctcccggtactgcacgggggcccagctacagccccagttactccggggaccccggtccg
gatccaaacagccacgccacgagcgacactgtgaatgcatctcagaggcctctggggctc
catggggccggcagctccagttctgacatcagtggggagaaaggaccggggacgtgggag
ggggcagggataggcagcccccagacccccaccccttgggagcagcgtggacttgggctg
ggtcttggagggggccagaggggccccgcacaaggcccccctgcggcagaaggagaatgg
aacaagccacccaccaatcagccttcctgcgagggcacggggggcagcggtaagaagttt
acaagtctgtggaggcctgcggaggaagagaaggccggcgctgacctccagcagagtttc
tccgcctctcgtgtcgtggagcagaacggcaaatggactaagccgaggacgggggacagc
gaaggacggggcgagggtcccgaagacaaagcccctccggagagaaagaaagccgacccg
caggccttgctccagagcatcgtgagcagagccgatctggatccccgggtcctctccaat
tccggctggggccagacccccatcaagcagaacaccgcctgggatacggagatgtcccca
cgaggggccaggaaggcggacaacgggacagaggcctgggggggctgggcgggccaagcg
agcccctccggggggttggcagagaggcacggcccccacgggaacggcgctccggctggg
gccgggtgggtggatcccaagtctgttacgcggtggggggaccccagaggccccggcccc
caagggcgcggggaggagggctctgcccctgctgggctgcaccacaagggcagccagtcg
tgggggggcgggggcgggggcggcggcaaagagggcaggtcttcctgccccacgtggggt
gaggccgaaaagctcaagcaggggtggggagaggcctccaaagctggccccggctgggcc
gtcccaccgaccgacggctgggggggcgagaacctgagaagcaaccattggggggaggtg
aggaaggccagttcgggcagcagcgacagcgaccggtcggcctccggctggaaggagccc
agcaagcccggcccggcgccctggagcgggggcagcgccaaacccagtgccacctcctcg
ggctgggaggagccggccacgccctgcccgagcccagggtggggggaccccgctaaggaa
gaggaggccaccggctgggaggagccgtcccccgagtccattcgccggaagatcgaggtc
gacgacgggacctcggcctggggcgacccaagcaagtacaactacaagagcgtgaacatg
tggaacaggaacgccctgcacggaggcggcccgtcagaccagcaggccccagcgccagtg
cccccaccgccaccgccaccgccaccaccgtcgcagctgccgcaggggctgccgtccagt
gccgcagcagctgtggaaggcggcagcagcaactccggctggggggagcccgctcccgca
cccgccactgtggataatggcacgtcggcctggggcaagcctgtggacactgggaccagc
tggggagagaccctcggcgacgcgacaggagggagcgcctgggtgaacgacatgcctgtc
gggcgtcaagcttctaatagacccggagctaaatctatgcaagtgcccgaagactggcgt
ggaggcgacatgcctctgacgggaagccagccgcccagctgggaggaagaggaggacgtg
gagatcggcatgtggaacagccacgccgtgcaggacaccggcagctctttgcactggacc
cccagtggctcaaagaagctgccttctaagggcacaatgaaaaatggaaataaacaggat
gatatgtggatgaatccatttgtgaagcagtttgcaaatattggcttcccgagagaattg
ccagaagaaatggtgcagagcaataagatggacttacctggagggctcctgcctgacaag
tggatggagatggagaagcacaatctgaatgctggagaatacggccgggtgatcgggaag
gccctgaactctcgtcctcagatttccaaagagtcttccatggaccgctgtccttatttt
gataaggaaggcctcgttgtagccgatgagtcccaaaatgtgccgtttatgtccaacccg
aacacgaagtttcccccttcaaacagtgcgctacctaacccggcccttggctctgtcaca
gggctgagcgtgccaaccttgcattcctctcgacagaacggcaaccccagtgcccttggg
aacccggccgctcagtcccggagcctcctcctgcagcagcagcccccggcccccccgcca
ctcaacacgtctcagcctaacccacgcgctcaagtgcctcctccattgctctcccctcag
gtcccagtatccttgctgaagtatgcgccaaacagcgggggcctgagcccactcttgggg
ccgcagcacgtcgccatgttgaaccaactctcccagctaaaccaactgtcccagatctcc
cagctgcagcgcttgctgacgcaacagaggaaggtacagagccagcgcaacatgtccgcc
ggtggccgtcagcagcaggagcagcagagtcgctccctcaatatgcagcaacaaatgatg
caaccgtcctgtcagctcgatccaaatctgctcctgaagcagcagcagcagcagcagctc
caccagagcaccttcgtgaagtctttcctggagaacgctgtgcccccccaggccaacgcg
gagctgccgaaggggccgccccaaaccaacgccttcagcagcttccccataggattgaac
tcaaacttgaatgtaaacatggatgtcggcagtattaaggagccacagtcccggctgaga
aaatggacgacggtggagagtatttctaccaatacttcgttggatcaaaatgccagcaaa
aacggtgctatttcaggtggtttcaggctggaggattctgcctttgttccctacgacttc
atggacagcagtagctcgccagccagtcctcctggatcgattggggatggctggtcccgt
gccaaatcacctaacggttctagcagtgtcaactggccaccagagtttcgtcctggtgag
ccgtggaaaggttatccaaacatcgaccccgaaactgacccttacatcactcccggcagc
gtcacaaacaatctgtctattcacactgtgcgggagnnnnnnnnnnnnnnnntcaggtga
gcctgccccccctcctcccccagtcgccctttctccagcccccccccttgccctccaccc
cagggaacagacttgggtccccaactcgcctgcttcctcccagccagaaacagcgactcc
agatccgcttggtctcccgcttccttgaacaacacctccctggcccacgagctgtggaag
gtcccgctgccccccaagagcgtggcggccccgtcgcggcccccgcctgggctgaccggc
cagaaggggcctctgtccgcctgggagaactccgtgcggctcagcggcggtggtgggtgg
agcaacgccgacgccagatatacccctggttccagttggggtgagagcagctcagggaga
ataaccaactgtcttgtcctgaaaaacctcacccctcagatcgacggctccaccctgcgg
acgctctgcatgcagcacgggccgctgatcaccttccacctcaacctgccgcatggcaac
gctttggtccgctacagttcgaaagaagaggtgataaaggcacaaaaatctctccacatg
tgtgtcctggggaacacgacaattctcgccgagtttgctagtgaagaggaggtgagccgc
ttctttgcacaaggccagtctcttaccccctccccggcctggcaatctctgggcaccagc
cagaaccgcctgggctccgtggagggctcgcacagtttccccaaccgcagcgacctaaat
cagcactggaacagtgccgggctgtcaggatcgagcggcggagacctccatggggcttcc
ctctggggggggagcaccggctattcctccagcctctggggctccctgggtggcccctcg
cccctcaacgcattcctctccgtcgaccatctcggggcagcgggggagtccatgtag
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integrated database retrieval system
