Pogona vitticeps (central bearded dragon): 110085397
Help
Entry
110085397 CDS
T05000
Symbol
SKIV2L2
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110085397 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110085397 (SKIV2L2)
03041 Spliceosome [BR:
pvt03041
]
110085397 (SKIV2L2)
03009 Ribosome biogenesis [BR:
pvt03009
]
110085397 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
pvt03016
]
110085397 (SKIV2L2)
Enzymes [BR:
pvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110085397 (SKIV2L2)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
110085397 (SKIV2L2)
Spliceosome [BR:
pvt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110085397 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
110085397 (SKIV2L2)
Ribosome biogenesis [BR:
pvt03009
]
Eukaryotic type
Pre-60S particles
Helicases
110085397 (SKIV2L2)
Transfer RNA biogenesis [BR:
pvt03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
110085397 (SKIV2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
110085397
NCBI-ProteinID:
XP_020661211
UniProt:
A0A6J0UKH6
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MADAFGDELFSVFEEDPSTASGSKKTKGAPEAAPAAAKAGKQSDGKSAASAKLPAKTKRD
AEVDSADITVLGKKPKLEDLAAEDLNLADLMPKVKVQAVETVEGCMHEVALPADEDFVAL
KPRTGKAAKEYPFLLDAFQREAILCVDNNQSVLVSAHTSAGKTVCAEYAIAMALREKQRV
IFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMRE
VAWVIFDEIHYMRDAERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCH
VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRK
GGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTEEEKKMVEEVFN
NAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETF
AMGINMPARTVLFTSARKFDGKDFRWITSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSP
TVGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPGVVEKV
NKLEQQYNEIEIPNEENVVIYYKIRQQLAKLGKEIEDYIHKPKYCLPFLQPGRLVKVKNE
DADFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLHCSKESLKNSATEAAKPAKPDEKGE
MQVVPVLVHLLSAISSVRLYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGI
KDPGLKKVIQKIEAFEHRMYSHPLHNDSNLETVYKLCERKAQIAVDIKAAKRELKKARTV
LQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQA
TALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEENYLNSFRPN
LMDVVHTWANGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAE
GITKIKRDIVFAASLYL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccttcggagacgagctgtttagcgtgttcgaggaagatccttccaccgcc
tccgggtcgaagaaaacgaagggagccccggaggcagctcctgctgcggcgaaagctggg
aaacaatctgatggcaaatctgcggcatctgctaaactaccagcaaaaactaagcgagat
gcagaggttgacagtgctgacattacagttttggggaagaagccaaagttggaagatctt
gctgcagaagatctcaatttggccgatcttatgccaaaagtaaaggtgcaagctgtggaa
acagttgaaggttgtatgcatgaggttgctcttcccgcagatgaagactttgtggccttg
aagcctagaacaggaaaagctgcaaaggaatatccatttcttcttgatgcttttcaaaga
gaagctattctgtgtgtggataacaatcagtcggttttagtatctgctcacacatcagca
gggaaaactgtctgtgcagagtatgccattgctatggctttacgggaaaaacagcgtgtg
atatttaccagcccgattaaagctctaagtaaccaaaaatatcgtgagatgtacgaagaa
tttcaagatgttggtttgatgactggggatgtcactatcaatccaacagcatcttgtctt
gtaatgacaacagaaattttgagaagcatgctttacagaggttctgaggtcatgcgtgag
gttgcttgggttatatttgatgaaattcattacatgagagatgcagaacgtggtgtggtg
tgggaagaaaccattattttacttccagacaatgttcactatgtatttctctctgccacc
attccaaatgcacggcagtttgctgaatggatatgccatcttcacaagcagccttgccat
gtaatctacacggactatcgacccactcctctgcagcactatatcttcccagcaggggga
gatggacttcaccttgtagttgatgaaaatggtgattttagggaagataattttaatacg
gctatgcaagtacttcgagatgctggtgatttggctaaaggagaccagaagggcaggaaa
ggtggaacaaaagggccttcaaatgtatttaagattgtgaagatgataatggaaagaaac
ttccagcctgtaattatattcagcttcagtaaaaaagattgtgaagcatacgctcttcag
atgaccaaattagacttcaatacagaggaagaaaagaagatggttgaagaagtatttaat
aatgcaattgattgtctatcagatgaagacaaaaagcttcctcaagttgaacatgtgctt
ccacttttgaagcgtggcattggaatccaccatgggggcttacttcctattctaaaagaa
accatcgaaattcttttctctgaaggactgataaaggcactatttgcaacagagactttt
gcaatgggaataaatatgccagcaaggacggtgctattcacaagtgcccggaagtttgat
gggaaagattttcgatggatcacctcaggtgaatatattcagatgtctggtcgtgctgga
cgtcgaggcatggatgataggggcattgtaattcttatggtggatgagaagatgagccca
acagttggaaaacagcttctgaagggatctgctgacccactaaatagtgcttttcatttg
acgtacaatatggtattaaatttgctgcgtgtagaagaaattaacccagagtatatgttg
gaaaaatctttttaccagttccagcattacagagctattccaggtgtagttgaaaaggta
aataagttggaacagcagtacaatgagattgaaatcccaaatgaggagaatgtggtcatc
tattataaaatcagacaacagctggctaaactgggtaaagaaatagaggattacattcac
aagccaaagtattgcttgccatttctacaaccaggaagactagtaaaagtgaaaaatgaa
gatgctgattttggctggggagttgtagtaaatttctcgaagaaatccaatgttaagcct
aattctggtgaactggacccactttatgttgttgaagtactcctgcactgtagcaaagaa
agcttgaaaaattctgcaactgaggctgcaaagccagcaaaacctgatgagaaaggggag
atgcaggttgttcctgttttggtgcaccttctgtcggcaatcagcagtgttcgactttat
ataccaaaagacctaaggcctcttgataacaggcagagtgtgttaaagtccatacaggaa
gtgcagaagcggtttcctgatggagttccattgttggatcctattgatgatatgggcatt
aaagatccaggtctgaaaaaagtaatccaaaaaatagaagcgtttgagcacaggatgtat
tctcatccacttcacaacgattctaacttggaaactgtgtacaaactttgtgaaagaaaa
gcacagattgctgtagatattaaagcagcaaaacgagaactgaagaaagccaggactgtt
ttacaaatggatgagctcaagtgtcgtaaacgtgttttgagaaggttaggttttgcaacc
tcttctgatgtcatagagatgaaaggacgtgttgcttgtgaaatcagcagtgcagatgag
ttgttgctgactgaaatgatgttcaatggccttttcaatgatttatctgcagagcaagca
accgccttactaagttgttttgtatttcaagaaaattccagtgaaatgccgaagctaaca
gaacagttggcaggcccactccgccagatgcaggaatgtgcaaaaagaattgctaaagtg
tcagctgaagctaaattggaaattgatgaggagaactacctcaattcctttaggccaaac
ttgatggatgtggtgcacacctgggccaacggagcaacatttgctcacatatgcaaaatg
acagatgtctttgaagggagcataattcgatgtatgagaaggctagaagaattgcttcga
cagatgtgccaggcagcaaaggccattggaaacacagaactggagaacaagtttgcagaa
ggtattaccaaaatcaagagagacattgtgtttgctgcaagtctgtatctataa
DBGET
integrated database retrieval system
