Pogona vitticeps (central bearded dragon): 110085562
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Entry
110085562 CDS
T05000
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03013
Nucleocytoplasmic transport
pvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110085562 (CASC3)
03015 mRNA surveillance pathway
110085562 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110085562 (CASC3)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110085562 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
110085562
NCBI-ProteinID:
XP_020661515
UniProt:
A0A6J0UQH5
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MADRRRQRASQDSSEEDESDSPPGSAAPSPRGSHRLGLAGXXXXXXXXXXXXXXXXXXXX
XXXXXXXAEAAVTVGGSPADSECESEDGIEGDAVLSDYESAEDSEAEEGEYSEEETSKVE
LKRESNDTELTTKADKGDEKPDSKGTVAGERQSGDGQESTEPAENKVGKKLPKHLDDDED
RKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQE
LIALYGYDIRSAHNPEDIKPRRVRKPRFGSPPQREPNWSNERPSKPPRHQSLDSTPVPPR
TFINRNSAGTGRMPPPRTFPRSNSYKETRPNYRAVDVNSQHAPRFSEQSKHESNYRVRRS
EPVPVREPSPEVEIPHACSSPVKKEEVVPEIQTTAADSLQAPPDRPVEKKSYSRARRSRN
KAGETGKLADEVPPPSGLTPAPLKTAEVVPTPSPAKTGNWEVPVEASLDGLEQDMTQLNM
TEQNWNQGQPQFIQPQAGIPNQMHIGAAPPPQFNRIEEMGVQGGRAKRYSSQRQRPVPEP
APPVHISIMDGHYYDTLQFQGPIYTHSENPAPLPPQGVIVQPEMHLPHPGLHPHQTPAPL
ANPGLYPPPVSMPPGQQPPPPPPPQQLLAPTYFSPPPGVMNFGSPSYPYPPGALPPPPPP
HLYPNAQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDGRSEKSKERNN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgtcggaggcaacgcgcgtcgcaggacagcagcgaggaggacgagtccgac
tcgcctcccggaagcgcggccccttccccgcgtggctcccaccgcctcggcttggcgggg
nccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnngcggaggcggcggtgacggttggagggagcccggccgac
tcggagtgtgaaagtgaagatggcatagaaggggatgctgttctctccgactatgaaagt
gctgaagactctgaggctgaggaaggggaatatagtgaggaggaaacatccaaagtggaa
ctgaagcgagaaagtaatgataccgaattgaccacaaaagcagacaaaggggatgaaaaa
ccagactcaaaaggcaccgtggcaggcgagaggcagagtggggatgggcaagaaagcact
gaacccgcagagaacaaagttggcaaaaaacttcctaaacacctggatgatgatgaagac
cggaagaacccagcatacatccctcggaaaggtcttttctttgaacatgaccttcgtggg
cagacccaggaggaggaagtccggcctaaagggcgccagcgtaagctgtggaaagatgag
ggccggtgggagcatgataagttccgggaagatgagcaagcccccaaaacaagacaggag
ctgattgctctttatggctatgacatccgctcagcacacaaccctgaagacatcaagccc
aggagagtccgtaaaccaagatttgggagtccacctcaaagagagccaaactggtctaat
gaacggcctagtaagccaccacgacaccagagcctagacagtactcctgtgccaccccgg
acattcatcaataggaattcggcagggacagggcggatgcctcctcctaggactttccca
agatctaacagctataaagagacccgcccaaattatcgtgctgtggacgtgaacagtcag
cacgcaccccgcttcagcgagcaatcaaagcatgagagcaattaccgagtgagacgctca
gagccggttccagttcgtgagccttctcctgaggtagagatcccacatgcttgcagcagc
cctgttaaaaaggaagaggtggtaccagaaatccaaacaactgctgccgattctcttcaa
gccccccctgacagacctgtggaaaagaagtcctactctcgggcaaggaggagtcggaac
aaagccggtgagacagggaaattggcagatgaagtcccacctccatcagggttgacacct
gcaccactgaagacggcagaagttgtaccaaccccttcaccagcaaagactggtaactgg
gaggttcctgttgaagccagtttagatggtcttgagcaggacatgacccagctgaatatg
acggaacagaactggaaccaaggacagccacagttcatacaacctcaagcaggcattcct
aaccagatgcacattggagcagccccaccacctcagttcaacaggattgaagagatgggt
gttcaagggggccgtgcaaagcgttactcatcgcagcgtcagaggcctgtcccagagcct
gctccacctgtgcacataagcataatggatgggcactactatgatacactacagttccag
ggaccaatatacacacatagtgaaaatcctgcaccactacctcctcagggggtgattgtt
cagccagaaatgcatcttccccatccagggttacatccacaccaaacacctgcacctttg
gctaaccctgggttatatcctcctccggtctccatgccccctggacaacagcctcctcca
ccaccaccaccacagcagctgctagcaccaacctacttctctcctccccctggagtgatg
aattttggcagtcccagttatccttatcctccaggagcacttccaccacctccacctcct
catctctatcccaacgctcaagcccagtctcaggtgtatggaggggttacctattacaac
acggtccaacagcaagtgcagcccaagccttcaccaccacgaagaacatcacagccagtt
accattaaaccaccaccccctgaggatggcagaagcgaaaaatccaaagagaggaacaac
acttaa
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