Pogona vitticeps (central bearded dragon): 110085989
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Entry
110085989 CDS
T05000
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110085989 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110085989 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvt04812
]
110085989 (VIM)
04147 Exosome [BR:
pvt04147
]
110085989 (VIM)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
110085989 (VIM)
Cytoskeleton proteins [BR:
pvt04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
110085989 (VIM)
Exosome [BR:
pvt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110085989 (VIM)
Exosomal proteins of other cancer cells
110085989 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
BLOC1_2
TPR_MLP1_2
DUF4407
Sec10_N
YwqH-like
DUF1759
Motif
Other DBs
NCBI-GeneID:
110085989
NCBI-ProteinID:
XP_020662306
UniProt:
A0A6J0UNM8
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSTTTSTRSSYRRMFAGGSRPSTGGSSRYVTSSSRYSLGSAIRPSSVRLVSSSAPGGGIY
ASKSVRLRSSLPPVRLLADAGVDFSLADAINSEFKANRTNEKAELQELNDRFANYIDKVR
FLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLADDI
MRLREKLQDEMLQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHEEEI
RELQAQLQEQHIQIDMDVAKPDLTAALRDVRQQYESVATKNLQEAEEWYKSKFADLSEAA
SRNNDALRQAKQEANEYRRQIQSLTCEVDALKGTNESLERQMREMEENFALEAANYQDTI
TRLQDEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRISMPIPTFASLN
LRETNLESIPVDTHSKRTLLIKTVETRDGQVINETSHHDDLE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgacgacctcgacccggtcttcttaccgccgcatgttcgcgggcggcagccgg
cccagcaccggcggcagctcccgttatgtcacgtcttcgagccgctactcgctgggcagc
gccatccggccgagcagcgtccgcctggtctcgtcctcggcgcccggcggcggcatctac
gcctccaagtcggtgcggttgcgcagcagcctgccgccggtgcgcctcttggccgacgcc
ggggtggacttctcgctggccgacgccatcaattcggagttcaaggcgaaccgcaccaac
gagaaggccgagctccaggagctcaacgaccgcttcgccaactacatcgacaaggtgcgc
ttcttggagcagcagaacaagatcctgctggccgagctcgagcagctgaagggcaaaggc
acctcgcgcctgggcgacctctacgaggaggagatgcgcgaactccgtcgccaggtggac
cagctcaccaacgacaaggcgcgcgtggaagtggagcgggacaacttggccgacgacatc
atgcgcctccgagagaaacttcaagatgagatgcttcagagagaagaagctgaaaacact
ctgcagtctttcagacaggatgttgacaatgcctctttggctcgcctggatcttgaacgc
aaagttgaatccctgcaagaagagattgtcttcttgaagaagcttcatgaggaggaaatc
cgtgagcttcaagcccaactccaggagcaacacatccagattgatatggatgttgccaag
cctgatcttactgctgccctgcgcgatgtgcgccaacagtatgaaagtgttgctaccaag
aaccttcaggaagctgaagagtggtacaaatctaaatttgcagatctctctgaagcagct
agccggaacaatgatgcgctgcgccaggccaaacaagaagcgaatgagtaccgtaggcaa
atccagtctctcacctgtgaagtggatgcccttaaaggaaccaatgaatccctggaacgc
cagatgcgtgagatggaggaaaactttgctcttgaagctgctaattaccaagacactatt
actcgtctccaagacgaaatccagaacatgaaggaagaaatggctcgccatcttcgcgag
taccaagaactcctgaatgtcaagatggctcttgatattgagattgccacttacaggaaa
ctgctggaaggagaggagagcagaatttccatgcctattccgacctttgcttccctgaac
ctgagagaaacaaaccttgagtctattccagtggacacccactcaaagagaacactccta
atcaagactgttgaaactagagatggacaagttatcaatgagacttctcaccatgatgat
ctggagtga
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