Pogona vitticeps (central bearded dragon): 110086969
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Entry
110086969 CDS
T05000
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110086969 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvt04121
]
110086969 (TRIM54)
Ubiquitin system [BR:
pvt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110086969 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
Prok-RING_4
UvrD_C
RHH_9
DUF5799
Zn_ribbon_FGT1_2
DUF4363
Motif
Other DBs
NCBI-GeneID:
110086969
NCBI-ProteinID:
XP_020663924
UniProt:
A0A6J0V045
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHTKT
EQQQQLLCEEHEDEKINIYCLTCETPTCSMCKVFGAHKDCEVAPLSNIYKRQKGELSDGI
AMLVAGNDRIQAIITQMEEICKTIEDNARRQKQHLCLRFDSLYSILEERKKELLQEIGRE
QEEKLQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMAVYLQQSKELIKKITDMSKVSM
NSRPEPGYENLDRFAVSVDHVAEMLRTIDFQTDPAGEDGEPEGPGSEGGGDAGEEEHPEG
AAGVEDGENLPKFRPKTAGSPRGQH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggtttcaagccgatgctggggacctcgcagagcatggacaacctg
gagaagcagctgatttgccccatctgcctggagatgttcaccaagccggtcgtgatcctg
ccgtgtcagcacaacctctgccgcaagtgcgccaacgacatcttccaggcctccaacccc
ctgtggcaatcccgcggatcgacttctgtgtcctccggtggccgattccggtgcccctcc
tgccggcatgaagtggtgctggaccggcacggcgtctatgggctgcagaggaacctcctg
gtggagaacatcattgacatatacaagcaagagtcctcccgacctctgcacaccaagacg
gagcagcagcagcagctgctgtgtgaggagcacgaggatgagaagatcaacatctactgc
ttgacctgcgagacacccacctgctccatgtgcaaagtctttggggcccacaaggactgt
gaggtggcccccttgtccaatatctacaagcggcagaagggggagttgagtgatggcatt
gccatgttggtggcagggaacgaccgcatccaggccatcatcacccagatggaggagatc
tgcaaaaccatcgaggacaacgcgcggcggcagaagcagcacctttgcctgcgcttcgac
tccctgtacagcatcctggaggagcgcaagaaggagctgctgcaggagatcgggcgcgag
caggaggagaagctccagcgggtgcgggggctcatccgccagtacggggaccacctcgag
gtctcctccaagctggtcgagtcggccatccagtccatggaggagccccagatggccgtc
tacctccagcagtcgaaggagctgatcaagaagatcacggacatgtccaaggtgtccatg
aacagccgcccggagcccggctacgaaaacctggaccgcttcgccgtcagcgtcgaccac
gtggccgaaatgctgcgaaccatcgacttccagacagatcctgcaggggaggacggggag
ccggaagggcctggctccgagggagggggcgacgcaggcgaggaagaacatccggagggg
gccgctggcgtggaagatggagagaacctgcccaaattccggcccaagacagcaggctct
ccacgtggccagcactga
DBGET
integrated database retrieval system
