Pogona vitticeps (central bearded dragon): 110087820
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Entry
110087820 CDS
T05000
Symbol
ARID1B
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110087820 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvt03000
]
110087820 (ARID1B)
03021 Transcription machinery [BR:
pvt03021
]
110087820 (ARID1B)
03036 Chromosome and associated proteins [BR:
pvt03036
]
110087820 (ARID1B)
Transcription factors [BR:
pvt03000
]
Eukaryotic type
Helix-turn-helix
ARID
110087820 (ARID1B)
Transcription machinery [BR:
pvt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110087820 (ARID1B)
Chromosome and associated proteins [BR:
pvt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110087820 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
CCD97-like_C
Merozoite_SPAM
Motif
Other DBs
NCBI-GeneID:
110087820
NCBI-ProteinID:
XP_020665404
UniProt:
A0A6J0V4B6
LinkDB
All DBs
Position
Unknown
AA seq
2385 aa
AA seq
DB search
MIMAAQIAAAPAGANKKNKGKTPSLPSNLSQDLSSGTVGTAGSGALLGVVDGTNKSSSSL
NNVEHHLHHHNELNMAHNATSAAAAAAAAGGHNNNATTTSNSSGGSFSSESASKEAGSSS
GLSSTSFSAPTMETGLLSNHKLKSVGGEHPTAAPSHHPHAQHHHPHPAHLHAQHPHAHHR
PHHHHHHHHHALQQHPQLNQFQPQPPPPQPHPMQNNNNNGGGGSSSSSNNNGGGGAAQPN
SADMEQQQQQHGGKDSGLGGRAEPQSQPPPQPLPNKGGDEEAATPPPADKMGEQHLSSRY
DHPRLGPLGGQPPPPPQQQQQPPPQGAGSGGGGGGGGGGGPSAVGVSEVNSYYGNAGSGG
GGGSSSGGASLASRAGPCFDQHGGQQSPGMGLMHPAAAPNSMDPLPNSHEGYANSQYNHY
SGAYGRPGGGGTGSGGGGGXAAGGGGGYGGPSSAFGVLGSPRQHQQSMMLGPGGGGSLGK
ASGAAGFQRFSGQNQHPSGATPTLNQLLTSPSPMMRSYGTGYADYTNPGAAPSQQQTQGV
GAGAGAAAAAATAPGSQQAAAAAGMVMGKDVGSQYGAANPAWAAAQQRSHPAMSPGNTGQ
PISRSQGNPMDPMVMKRPQLFAVGNSPHAQTQPSSPYPGQSYGPPPGPQRFPMGMQARTP
GSMGGLQYPQQQMPPQYGPQGVTGYCQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQEI
SQEAYGTRSQPPIAQGKPNHEELNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASG
STSSQGEQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQI
QSQTSGSQSESSSHPALSQSPMPQDRGFMAGIQRNPQLSQYPSQQTGPSMSPHPSPGGQM
HSGIGSFPQSNSSSTYGTQMSQYGPQGNYSRQPTYSGVTNTSYSGPGPGMGVNANNQMHG
QGPGQPCGSIPLGRMPSAGMQSRPFPGNMSSMTPSSPGMAQQGGPGMGPPMPTVNRKAQE
AAAAVMQAAANSAQSRQGSFPVVNQSSIMGSSSPYSQPMNSNSSLMNPQVPPYSMAPNMV
NSSTAPMGLADMMTPGESKLSIPLKPDGKEEGPPQPESKKDSYSSQGISQPPTPGNLPVP
SPMSPSSASISSFHGDESDSIGSPGWPKTPSSPKSSSSTTTGEKITKMYELGNEPERKMW
VDRYLNFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVG
TSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGP
QTPQSTGSNSMTEVPADLKPPTPASTPHGQMTPMQGSRNSSVSVHDPFSDVSDSTFPKRN
SMTPNAPYQQSMNMPDMMGRMPYEPNKDPFGGMRKVPGNSEAFMTPGQMPNSGMQDMYNQ
APSGAISNMGLSQRQQFPYGSGYDRRHEPYGQQYPAQAPPSGQPPYGGHQPAMFPQQQNY
KRHMDGMYGPPAKRPDGDMFNMQYGNHQQEMFNQYSSTYSGPDRRPMQGQYPYAYSRERM
QGPGQIQQHAIPSQMIGGPLQSSASSEGPQQNMWPTRNDMSYPYQNRQGPGGPAQAPPYP
GMNRTEDMMVPEQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHI
SRAPSPASFPRSHENRMSPSKSPFLPSMKMAKVMPTVPVPQITGPPVQPPPIRREITFPP
GSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAT
FNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGHPGPKLQNHISARKENGQSVTENARN
EEENNDECIDYFAEFEDEEEEEEEEDDDRNENAEGGEKNAVLAPSGANGDPSERPKQASK
FDKLPIKIVKKNNLFVVDRSDRLVHVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEILPR
RRPSPLSSTSKKRNVEGKGEYEEQQDKSISATIDDVLSARPGALSEDSDSTSQTDSSKFP
FGIHQAKSHRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDAE
MSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEEADKGVACSKDEWWWDCLEVLRDNT
LVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLE
TLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTL
AARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLA
MARVEENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7158 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaaatagcagcggctccggcgggtgcgaacaagaagaacaagggc
aaaaccccgagtttgccgagcaacttaagccaggatcttagctctggcaccgtaggaact
gctggatcgggggctctcttaggggtcgtagatgggactaacaagagcagcagcagcttg
aataatgtagaacaccatctccatcaccataatgaactgaacatggcccataatgcaact
tctgctgctgctgctgccgccgccgccggcggtcataacaacaacgctaccaccaccagt
aacagcagcggcggcagcttttcctcggaatcggcttcgaaagaagcggggagctcgtcg
ggtttatcttccacttctttttctgctccgacgatggagacggggctgctctccaaccac
aagttgaaaagcgttggaggcgagcacccgaccgccgcaccttcccaccacccccatgcc
cagcaccatcacccgcacccagctcacctccatgcccagcacccccatgctcaccaccgt
cctcaccaccaccaccaccaccaccaccacgcacttcagcaacatccacagctaaatcag
ttccagcctcagccgcctccgcctcagccccatccgatgcagaataacaacaacaacggc
ggcggcggtagcagcagcagcagcaacaacaacggcggcggcggcgctgctcagcccaac
agcgcagacatggagcagcagcagcagcaacatggaggaaaagacagtggcttgggggga
cgggccgagccccagagccagccgccgcctcagcccctgccgaataaaggcggggacgag
gaagcagcgacgccgccgccggcggacaaaatgggggagcagcacctcagcagccgctac
gaccaccccaggttgggacctttgggcggacagccgccgccgccgcctcagcaacaacag
cagccgccacctcagggagcgggcagcggaggaggaggaggagggggcggcggcggcggc
ccctcagcggtgggtgtctcggaggttaatagctattacggcaacgctggcagcggcggc
ggcggcggcagcagcagcggaggcgcctccttagcgagccgggccgggccttgctttgat
caacatggcggacaacaaagccccgggatggggctaatgcaccccgcggcggcccccaac
agcatggaccccctacccaactcgcacgaaggctacgccaacagccagtacaatcactac
tcgggcgcttacggccggcctggcggcggcggcactggcagcggcggcggcggcggcnnt
gcagcaggcggtggtggcggctatgggggaccgtcttccgcctttggggtgctgggctcc
cccaggcagcaccagcagagcatgatgctgggccccggcggagggggcagcctgggcaag
gcgtctggggcggcgggcttccaaaggttctcggggcaaaaccaacacccgtccggggcc
accccaaccttgaaccagctcctgacttcccccagccccatgatgaggagctatggcacg
ggttacgccgattataccaaccccggggctgccccatcgcaacagcagactcagggagta
ggagcaggagccggagcagcagcagcagcagcaaccgccccaggaagtcagcaggcagca
gcagcagcaggcatggtcatgggcaaggacgtgggttcccagtatggagctgcaaaccca
gcctgggcagcagcacaacaaaggagccatccagctatgagccctggaaacacaggacag
cccatcagcaggagccagggcaacccaatggatccaatggtcatgaaaagacctcagttg
tttgcagtgggcaacagccctcatgcccagacacagccaagcagtccatatccagggcag
tcatatggacctccaccgggaccacaacgctttccaatggggatgcaggcccggactcca
ggttccatgggaggcttgcagtatccgcagcagcagatgccacctcagtatggtccacag
ggtgtaactggttactgccaacagccatattacaaccaacaaccacaacctcaacatctg
ccaccccaggcacagtatctttcacaggcccagcaacgataccaggcccagcaggaaata
tctcaggaagcctatggaacaaggtctcaaccccctatcgcccaaggcaagcctaatcat
gaagaactgaacctgatccaacaagaaagaccgtctagtttaccagatttatcgggctcc
attgatgacctccctacgggaactgaagcaactctaagttctgccgttagtgcatcaggt
tccaccagcagtcaaggggagcagagcaacccagcacagtcacctttctcccctcatgcc
tccccccatctctccagcattcctgggggcccttccccttcccctgtgggctctcctgtt
ggaagcaaccagtcaagatctggccccatttctcctgcaagtattccaggcagccagatt
cagtctcagacttctggaagccaatcagaatccagctcccatcctgctttgagccagtca
ccgatgccacaggaccgagggttcatggcaggcattcagagaaatcctcagttgtctcag
tacccatctcagcagacaggaccttccatgtcaccccacccttcaccaggaggccaaatg
cactctggaattgggagctttccacagagtaattccagcagcacttatggaactcaaatg
agccagtatgggccacaaggaaactactccagacagccaacgtactctggagtgaccaac
acaagttacagtggcccaggacccggtatgggtgtaaatgccaacaaccagatgcatgga
cagggaccaggccagccttgtggttccatacccctgggacgaatgccatcagctgggatg
cagagcagaccatttcccggaaatatgagcagtatgacccccagttctccaggcatggct
cagcaagggggcccagggatgggacctcctatgccaactgtgaaccgtaaggcacaggag
gcagctgcagcagtgatgcaggctgctgcaaactccgcccagagcaggcaaggcagtttt
cctgtcgtcaatcagagcagcattatgggatccagctctccctacagccaaccaatgaac
agcaactcaagcctgatgaatcctcaagttcctccttacagcatggcacctaacatggtg
aacagttccacagcacctatgggtcttgcagatatgatgactccaggagagtccaaattg
tccattcctctcaaaccagatggaaaagaagaagggcctcctcagcctgagagcaaaaag
gatagctacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtccct
tccccaatgtccccaagttctgctagcatctcctcatttcatggagatgaaagtgatagc
attggcagcccaggctggccaaagactccatcaagccctaaatcaagttcctccaccaca
actggagagaagatcacaaaaatgtatgagctaggaaatgaaccagagcgcaaaatgtgg
gtggatcgctatctcaacttcatggaagagagggggacacctgtggctagtttacctgct
gtaggcaagaagcccctggatcttttcagactttatgtctgtgttaaggagattggaggt
ttagcccaggttaataaaaataagaagtggcgtgagctggcaactaacctaaatgttggc
acttcaagcagtgcagctagctccctgaaaaaacaatacattcagtacctgtttgccttc
gaatgcaagattgaacgaggggaggagccgccaccagaagtcttcagcactggagatacc
aagaaacaacctaagattcagcctccatctcctgctaactcgggttcccttcaaggtcca
cagacccctcagtctactggtagcaattccatgacagaagtgccagctgacctcaagcct
ccaacaccagcatccacacctcatggacagatgactcctatgcagggcagcagaaatagt
tctgtcagtgtgcatgatccattttcggatgtaagtgattccacattcccaaagcgaaac
tccatgaccccaaatgcaccctatcagcagtcaatgaatatgccagatatgatgggaaga
atgccctatgaacctaacaaggatccttttggtgggatgagaaaagtgcctggaaacagt
gaggctttcatgactcctggacaaatgcccaacagtggaatgcaggacatgtacaaccag
gctccctctggagccatatcaaatatgggcctaagccagcgccaacagttcccctacgga
agtggttatgaccggaggcatgaaccatatggacagcaatatccagcacaagcacctcct
tcaggacagcctccctatggagggcaccaacctgcaatgtttccacagcagcagaactac
aagcgtcatatggatggcatgtacggccctccagcaaaacgccctgatggagatatgttc
aatatgcagtatgggaaccaccagcaggagatgtttaaccagtacagcagtacttactct
ggaccagacaggagacccatgcaaggacaatatccatatgcttatagcagagagagaatg
cagggtccaggacaaattcagcaacatgcaataccctctcagatgattggcgggcctctg
cagtcatccgcctccagtgaaggcccccaacagaacatgtggccaacaagaaatgatatg
tcttacccctatcagaaccggcaaggccctgggggccctgcacaggccccaccttatcca
gggatgaaccggactgaagatatgatggtacctgaacagaggataaaccatgaaagccag
tggccttctcatgtcaaccagcgtcagccttcttacatgtcatcctctgcctcaatgcag
cctatcacccgacctcctcagtcatcctaccagacgccaccatcaatgccaaatcacatc
tctcgggctccgagccctgcatcttttccacgctcgcatgaaaaccgtatgtctccaagt
aaatccccttttctgccttctatgaagatggcgaaagttatgcccactgttccagtccca
cagatcacgggtcctccagtccagccaccaccaattaggcgggaaataacatttcctcca
ggctcagtagaagcatcccaaccagtcttgaaaccaagacgaaagattacctcaaaagat
attgtgactcctgaggcctggcgagtgatgatgtctcttaaatcaggccttcttgctgaa
agtacctgggcgttagacactattaatattctgctgtatgatgacagtactgttgccact
ttcaatctctctcagttatctggctttcttgaacttttggtggaatattttagaaaatgc
ctcattgatatctttgggatcctaatggaatacgaagtgggacatccaggaccaaaatta
caaaatcatatttcagctcggaaagagaatggccagtctgtaacagagaatgccagaaat
gaagaagaaaacaatgatgaatgtattgattactttgctgaatttgaagatgaggaggaa
gaggaagaagaagaagatgatgatcgaaatgagaatgctgaaggaggagagaagaatgct
gttcttgctccttccggtgccaatggtgatccaagtgagaggccaaaacaagccagcaag
tttgacaagctgccaataaaaattgtaaagaaaaacaatctatttgttgttgaccgatct
gacaggctggtgcatgttcaggaattcaacagtggacttctccactggcagcttggtggg
ggggatacaactgaacacatccagacacactttgagagtaagatggagattctgcctcgc
aggaggccttctccattgagctctacaagtaaaaagaggaatgtggaagggaaaggggag
tatgaggagcaacaggacaaaagcatatcagccaccattgacgatgtcttgtcagctcga
cctggagcattatctgaagactcagactctacttcacagacagatagcagtaaatttcca
tttgggatccatcaagccaaaagtcatcggaatatcaagctgttagaagatgagccacgg
agtcgagatgagactcctctatgcaccataactcactggcaggactctttggccaagcgt
tgcatttgtgtgtcaaatatcgtccgcagcttgtcctttgtgcctggcaatgatgctgag
atgtccaaacacccaggcctggtgctaatcttggggaagttgatccttctccatcatgag
cacccggaaagaaagcgagcaccacagacatacgaaaaagaggaagaggcggacaaaggg
gtggcctgcagcaaggatgagtggtggtgggattgccttgaggtcttgagggataatacg
ttggtcaccttagccaacatttctggacagctagacttatctgcttatacagaaagcatc
tgtttgccaattttggatggtttactgcactggatggtgtgtccatcagcagaggcacag
gatccttttccaactgtggggcccaattcagtcctttcacctcaaagacttgtgctggaa
accctgtgtaaactcagtatccaggacaataatgtggaccttatcttggccactccccca
ttcagtcgtcaggagaaactctatgctactttagttaggtacgtcggggaccgcaaaaac
ccagtctgtcgagaaatgtctatggcactcttatcgaaccttgcacagggggacacgcta
gcagcaagggcaatagctgtgcagaagggaagcattggaaacttgataagctttcttgag
gatggggtcactatggcccagtaccagcagagccagcataacctcatgcacatgcagcct
ccacctcttgagcctccaagcgtagacatgatgtgcagggcagccaaggctttgctggcc
atggctcgggtggaggagaaccgctcagagttccttttgcacgagggccgtttgctggat
atctcaatatctgctgtcctgaactctctggttgcatctgtcatctgtgatgtacttttt
cagattgggcagttatga
DBGET
integrated database retrieval system
