Pogona vitticeps (central bearded dragon): 110088594
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Entry
110088594 CDS
T05000
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110088594 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110088594 (EDC4)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110088594 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
110088594 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_EDC4L
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
CelTOS
WDR55
Motif
Other DBs
NCBI-GeneID:
110088594
NCBI-ProteinID:
XP_020666642
UniProt:
A0A6J0V166
LinkDB
All DBs
Position
Unknown
AA seq
1400 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPGGLVNENQRASSSYNGDLNGLLVPDPLAGGDGLPLT
KSVPQPVPVGTLQEKQVICLSGDDSSTCVVITAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNAYLAYAIRGASNGSAMVRVLSVSTAERTLLKGFTGGVADL
AFAHLNSNQVACLDEAGNLFVWRLTMENGKIQEEILVNIKRPEGTPLNSFRRIIWCPFIP
DENDDSCEEGSQTLALLHEDRAEVWDLDIIRANHSSWPVEVTNIKEGFIVVKGHSTRLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKACLDLSAEYLI
LSDVQRKVLYVMELVQNQEEGKAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESDGLNAEGTQGIGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDTAAPVPPHGSHE
DFAFPDHLADLGAEGLGSEKGSIYDSQPDLRRISELSVPVDFLPSSNDAKPKLMTPDAFM
TPSTSLQQITVSPGSSISSLTAVTTMSSSMVSDPPIPRSAEDVSLSPKMQLDASLGLSSS
SGSLQTSPRSHSVLLSGLPDKLAPKPPIPVSSGNSPHAPERQEVEPLMMPQSSPTRERSP
DVISSASTAMSQDIPEIASETLQRGFGTSSSGHDAEVLDSNHHDDSMASAASALHLLSPR
NRHNSEHSHHSLDMAPSEVDMLMAPSLLEMALPQETTASDSSMSQPWPAAPDITRETRNS
MADSPRNEAEEKHKSSYHRHTYHMLQHESQDASAEQSDHDDEVASLASASGGFSAKVAAQ
RLPVKDWKAKVSPRASPKLKRKGKKDDGDVTQSPRPFDQQVAPEYQDELMSLLRAQQREI
AELKQNQMELMQRLTDHLDAVQSSLMGHIERVLDSQQEQEQQRLDLALAERQQRSGQLQE
HLSQHLSQSLSAAACSRLERTIREEMKKAVPPCISKTLDPVTGQLNNTIAAKLTAIEGTL
KENVAKLVKSKNLTDSIARTAAETLQGPMQSAYREAFQSVVLPAFEKSCQSMFQQINDTF
KQGTQEYIQQLETHMKNKKARDQDARDSQLSQLRQLVSSFQSTTDQLASTIATSVHTEVQ
HQLHVIVGNMQESILAQVQRVIKGEVSVAMKEQQAAVTSSIMQAMRSAAGTPVPATHLDF
PSQQAHVLQLLQQGHLNQAFQQALTAADLNLVLYVCETMDPQQVFGQHPCPLSQPVLLSL
IQQLSSDLGARTELKLNYLEEAVMHLDQSDPITRDHMGSVMNQVRQKLFQFLQTEPHNSL
SKPARRLMIMLQGLVTPGMS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcgagcatcgatatcgaggatgcgactcagcacctgcgagacatcctgaag
ctggaccggccggggggtttggtgaatgaaaaccagagggcatccagttcatacaatgga
gatctaaatggtttgctagtgccagatcccttagcaggtggggatggccttcctttgacc
aagtcagtcccccaaccagtccccgtgggaaccctgcaagagaaacaagtcatctgcctc
tctggagacgatagctccacctgtgtggtcataactgcaaaagatgttgaaatagtagct
agcagtgactccagtatcaccagtaaagctagagggagcaacaaggtaaaaatccagcca
gtggccaggtatgattgggagcagaaatattactatggtaacctgatagccgtgtcaaat
gcctatttggcatatgccattagaggtgccagcaatggctctgccatggtacgagttctc
agtgtcagcacagctgaaaggaccttgctgaaaggcttcaccggtggcgtagcagaccta
gcctttgctcacctcaattccaatcaggtggcctgtttggatgaagctggaaaccttttt
gtctggcgcctgaccatggagaatggaaaaatccaagaagagattttggtgaacatcaaa
cgacccgagggtacacctctgaacagcttcagaaggataatttggtgcccctttatccct
gatgagaacgatgacagttgtgaggagggcagtcagactctggcgctgttacatgaggac
agggcggaggtctgggaccttgacataatccgagccaatcacagttcatggccagtagaa
gtcactaacatcaaagaagggtttattgtggtcaaagggcacagtacgcgcctgagtgaa
ggagccctctccccggacggaacagttttagccacagcaagccacgatggctatgttaaa
ttctggcagatttacattgaaggacaagatgagccaagatgcctccacgagtggaagccc
catgacggcaggccgctctcctgcttgctcttttgtgacaaccataaaaaacaagaccct
gaagttccgttttggaggttcctcattacaggagcagatcagaatcgggaactgaaaatg
tggtgcactgtatcatggacctgtctgcagactgttcgattttctccagatatattcagc
tcaatgagtatccttcctagcctgaaggcctgcctagatctgtctgccgagtatctgatt
ttgagtgatgttcagagaaaggtcttgtatgtgatggagcttgtgcagaaccaagaggag
ggcaaagcatatttcagttccatctcagagttcctgctgacccatccagtcctcagcttt
ggcatccaggttgtcagtcgctgtaggctgagacacacagaggtcctgccagcagaagag
gagagtgatggcttgaatgcagaaggaacacagggcattggagctgtagaatcagctgca
ggggtgctgatcaaactcttctgtgtccacacaaaggcccttcaagatgtacagatccgc
ttccagcctctccatagtccagacacagctgcaccagtacctccccatggttcacatgaa
gattttgcattcccagaccatctcgctgatctgggcgcagaaggactgggatcggagaag
ggatccatttatgactcccagccagatctgcgccgcatttcagagctgtctgttcctgta
gacttccttccctcatcaaatgatgcaaaacccaaacttatgactccagatgcattcatg
actccaagtacatctctgcaacagatcacagtctcacctggaagtagcatcagttccctc
acagctgtcaccaccatgagcagttccatggtcagcgatccccccattcctagatcagct
gaagacgtgtctctgagcccaaagatgcagctggatgctagtctcggactgagcagcagc
agtgggagtctgcagacaagtccacgaagtcattcggtcctcctctcgggccttcctgac
aagctggccccaaagcctcccatcccagtttcctcagggaactccccgcatgcaccggag
cggcaagaagtggagcctctgatgatgcctcagtcttcccccactcgcgaacgctcccct
gatgtcatctcctcagcttcaactgccatgtcccaggacatccctgaaattgcctcagag
accctgcagcgtggctttggcacaagctcttcaggacatgatgcagaagtcctggactcc
aaccatcatgatgacagcatggcttctgcggcgtcagccttgcacttactgtctccgcgc
aatcggcacaactcagaacacagccatcattccttggacatggcccccagtgaagtggac
atgctgatggcaccctccctgctggagatggccttacctcaggaaacaacagcttctgat
agtagtatgagccaaccttggccagctgcccctgacatcaccagagagaccaggaacagc
atggcagatagccctaggaatgaagctgaagagaaacacaagagctcttatcacagacac
acctaccatatgctgcagcatgaaagtcaggacgctagtgctgagcaaagtgatcatgat
gatgaagtagcaagcttggcttcagcatcaggtggatttagtgccaaagtggctgcccag
aggctacctgtaaaagactggaaagcaaaggtgtccccccgagcctccccaaagctaaag
aggaagggaaagaaagatgatggggatgtgacacagtctccaaggccctttgatcaacag
gttgctcctgaataccaggacgaactgatgtccctgctgagggcccagcagagggagatt
gctgaattaaaacagaaccaaatggagctaatgcagaggctcactgaccatctggatgct
gtgcagagctcccttatgggccacatcgagcgggtgttggattcccaacaagagcaagag
cagcagaggctagacctggctctggccgagaggcagcagcgcagtgggcagttgcaggag
cacctctcccagcacctctcccagtccctctctgcagccgcctgcagccgattggagagg
accatccgcgaagagatgaagaaggccgtgcctccctgcatctccaagactttggatcct
gtcactgggcagctgaataatacaattgcagccaaacttacagccattgaggggacgttg
aaggagaatgttgcaaaactggtgaaatcaaagaatctaacagatagtattgcccgaaca
gctgctgagaccttgcagggacccatgcagtcagcatacagggaggcctttcagagtgtg
gtcctgccagcttttgagaagagttgccagtccatgttccagcagatcaatgataccttc
aagcaaggcacgcaggaatatattcagcagctggagacccacatgaagaataagaaagcc
cgagaccaggatgcccgggactctcagctgagccaactccgacaattggtcagctccttc
cagagcactactgaccaactggcatcgaccattgcaaccagtgtacacaccgaggtgcaa
catcaactccatgtcatcgtgggcaacatgcaggaatccatcctggcccaagtgcagcga
gtgattaaaggagaggtcagtgtggccatgaaggagcagcaggcggctgtcacgtccagc
attatgcaggccatgcgctcggccgccggcacccccgtccccgccactcacctggacttc
ccgtcacagcaagcgcatgtgctgcagctcctgcaacagggacacctgaatcaagccttc
cagcaggccctcacggcagccgatttgaatctggttctctacgtctgtgagacgatggac
cctcagcaagtatttgggcagcatccctgcccgctgtcccagcctgtccttttgtctctc
attcagcagctctcctcagacttgggagctcggacggagctcaaactgaattacctggag
gaagcggtgatgcatctagaccagagtgaccccatcacccgggaccacatgggctcagtt
atgaaccaagtgaggcagaagctcttccagttcctgcaaacagagcctcacaacagccta
agcaagcctgcacgccgacttatgatcatgcttcaaggcctggtcactcccggcatgtct
taa
DBGET
integrated database retrieval system
