Pogona vitticeps (central bearded dragon): 110089100
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Entry
110089100 CDS
T05000
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110089100 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvt04121
]
110089100 (SLX4)
03400 DNA repair and recombination proteins [BR:
pvt03400
]
110089100 (SLX4)
Ubiquitin system [BR:
pvt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
110089100 (SLX4)
DNA repair and recombination proteins [BR:
pvt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110089100 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
zf-C2H2_6
CA109-like
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
110089100
NCBI-ProteinID:
XP_020667575
UniProt:
A0A6J0V7T9
LinkDB
All DBs
Position
Unknown
AA seq
1388 aa
AA seq
DB search
MGADSEDEFREQQRRRREDVGPVLCQLCRADLSALDPLRRQQHVNRCLDELEGLPPPLPP
PPPSVPDCPVCGKGFGSLKARAGHLKRCAAKMDVPPTLLLQAVRRQQQQQQEPSSSSSSP
SLGNRLPSLPSHLKRKVTSSIENLAKKPKTAPKIDGADEDLLVAMAMSRSLLEKEKAAAK
LRAREKKNGAKPPDSPPPLLLQDAQKMHRDMEERVGQLLSEAGEFPSTPQLPSSRLLERE
RSREAGGQPASSRGPGSSLWEFSSLTGPCLPGSFTATGLDLPVPSQLPGTQSLALGTSLT
LPGPVGLQEIDSTPPKASPFQSIDDGERQGCGPRDEQAANPLDVQALQDLEDLAEEGLTL
TQWGLEVRQLERAGREEEMANTFQTSSVLPGENRLSLRSHHQTVLLDLLTSAFREMVNNP
HLSDLQFQVDSGEILYAHMFVLYARCPLLMEAVDCMGFRVAEEGGMWTRRMLLSDVPREA
VQVFLSYLYTADSVIPRRVLSDVGALADRFGVRELAALCGRDQLGSPVSGEEKEDGAGSE
EGREEILEELLESMWPEGDKEAQLRGGRPEEAGSENMSEQDLEEIYQFAATQHRLAERQA
EEGRGRREAQRGLKSSLGGEGGARLGPSREEEVGPRRSLCLELQEEAREGRGLSRGAAEA
SKEEEEDCLLVREGCATRSPQRRRAQEPSPDVGSEGATVGRPPGLRRVWKMLSGDGASQL
HGEAFPAQDRGPPSSSPPPKTADARGLPGAPVHLPAASQPTVAGRCSSSQSRGSQEPLGR
EAPVSRLDHPPGGPGTLSTGADSRPVVVVLDSEEEEEEEEEAEQGKGREPCIGCVPLGHP
GIRCQVLEPMSNGKECPGAGSCSPLHWVSPEKGSRGRGPGSLAGVTGGSLGTRPAGQGRS
SDEEDASSEGGLTLVPDTPVPCGQGIRSPWAAWGGWKSRDEAGPLDRSPSPLRPPAKEVC
SPRSALPSCWPASGNPGGSRHHRLNHPASRGAQKVEEAAVVILEDSEEEAAEARPAAALS
LGEASSLSTEPTCAADGRDGLGMPLVASEARGGSPLLERSPFTCRTDSSEEEAREWAGED
SDSSDVLPLAQRVPPAGTPPRAQGPVCEARERPGTATPQTPMPSYSTMVTPELKKELRRF
GVRALPKRQMVLKLKEIFQFTHQQVGLDAKEEAASCSPQALSPRAPPRALPKQAAGSVQP
SHLPQGGLLHLRDPSPGGQARPGRCRLQVGPDAQSFSAAGLRLGSAPENSRTSLAVSQGP
TSSLARDSKRSVASERSSSFVCEAHSALGAVREAEEAEHLPASQASSGLETDKLEALQRY
LHATPALGRQILLYQPIELAGLQAKLKEQGIRIALGKLLDFLDTQCITFTTAEARKEKRT
PQKGRRRC
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgactccgaggacgagttccgggaacagcagcggcggcggcgggaggacgtg
gggccggtgctctgccagctgtgccgggcggacctctcggcgctggacccgctccggagg
cagcagcacgtcaaccggtgcctggatgagctggaggggctccccccgcccttgccgccg
ccgccgccctccgtccccgactgcccggtctgcgggaagggcttcggctccctcaaagcc
cgggcgggccacctcaagcgctgcgcggccaagatggacgtgcccccgaccctcctcctc
caggccgtgcggaggcagcagcagcagcagcaggagccttcctcctcctcctcctccccc
tccctgggcaaccgcctcccttctctccccagtcacctgaagcggaaagtcacctcttcc
atcgagaatttggccaagaaaccaaagacagcacccaaaatagacggggcagatgaggac
ttgctggttgctatggcgatgtcacgctctctcctggagaaagagaaggccgcagccaaa
ctgcgagccagggaaaaaaagaatggtgcgaagcctcccgactcgccaccaccgctgctg
cttcaggatgcacagaagatgcacagagacatggaggagcgtgtggggcagttgctttca
gaggcaggagagttccccagcaccccccagctcccctccagccgcctcttggagagggag
cggtccagagaggcaggtgggcagccagcgtcctccagaggcccaggctcttccttgtgg
gagttcagctcattaacggggccgtgtctccctggcagtttcacagctaccggccttgat
cttcctgttccttcacagctgccagggacccagagcctggcgctgggcacttccttgact
ttgcctggccctgttggattgcaggagatagattccacgccccccaaggccagccctttc
caaagcatagatgatggcgaacgtcaaggctgtggccccagagatgagcaagccgccaac
ccgctagatgtccaggccctacaggacttggaggacctcgctgaagaagggcttaccctt
acccagtggggcctggaggttcggcagctggagagggcagggcgagaggaggaaatggca
aacactttccagaccagttctgtcttgccaggggagaacagactgtccttgagaagccat
caccaaacagtcttgctggatttattgaccagtgccttcagggagatggtcaacaatccc
cacttgagtgacctccagttccaggtggacagcggagagatcctctacgctcacatgttt
gtcctttatgctcgctgtcccttgcttatggaagcggtggactgcatgggattcagagtg
gctgaagaaggcggcatgtggacccgccggatgctgctgagcgatgtgcctcgggaggcc
gtgcaggtgttcttgagctacctttacacggccgactccgtcatccctcgccgggtcctg
tcggacgtgggcgccttggccgacaggtttggcgtgagggagctcgctgctctgtgtgga
agggaccagctgggttcaccggtgtctggagaagagaaggaagatggagctggcagcgag
gaaggcagggaggagatcctcgaagagctcttggaatccatgtggccggaaggagacaaa
gaggctcagctgagagggggccgcccagaggaagcaggcagtgaaaacatgagtgagcag
gacttggaggaaatctatcaatttgctgccacccaacatcgactggcggaacgccaggca
gaggaggggagaggccgtcgtgaggcccagcgtggcctgaagagctccctaggaggggaa
gggggagccagactgggcccctctagggaggaggaggtggggccgagaaggtccctttgc
cttgagttgcaggaagaggcccgggaggggaggggactctccagaggagccgctgaggct
tccaaggaggaggaggaggactgcctcctcgtgcgggagggctgcgccacacggtccccg
caaaggcggagggctcaggagccgagccctgacgtgggcagcgaaggtgccacagtggga
cggcctcctggcctccggcgggtgtggaagatgttgtccggcgatggcgctagtcagcta
cacggggaggcttttcctgcccaagaccgaggccccccctcttcctctcccccaccaaaa
acagccgacgccagagggcttccaggagcccctgtccacctcccagctgcctcccagccc
accgtggctgggaggtgctcctcctctcagagcagaggcagccaggagcccctggggagg
gaggcccccgtcagtcgcttggatcaccccccgggtgggccagggactctttccaccggt
gccgatagccgtccagttgtggtggtgctggattctgaggaggaggaggaggaagaagaa
gaggcagagcaggggaaaggcagggagccgtgcataggctgtgtccctttgggtcatcca
ggcatccggtgtcaggtgctggagcctatgtcgaacggcaaggagtgcccgggggcaggc
agctgttcacccctgcactgggtgagccctgagaagggcagcaggggccgggggccgggc
agcctcgctggtgtgactggagggtccctgggaacgaggcctgctggccaggggcggagc
agtgatgaagaggacgcttcctcggagggaggactgacgctggttccagacacgccggtg
ccatgcgggcaggggataaggagtccatgggcggcatggggtggttggaagtcaagggac
gaggctggccccctcgaccgcagcccgtctccactgaggccgcctgcgaaggaggtctgt
tccccccggtctgccttgccctcctgctggcctgcaagtgggaatcctggcggcagccgc
caccaccgcctcaaccaccctgcttcgcgtggagcccagaaggtggaggaggcagccgtg
gtcattctggaggacagcgaagaggaggcggcggaggctcggccagccgctgccctttcc
ctgggagaggcctcctcgctctctacagagcccacgtgtgccgctgatggcagggatggg
ctggggatgcccttggtggcttcagaggcgagagggggcagccccctgttggagaggagc
cccttcacctgccggaccgattcatcggaggaggaagcccgagagtgggcgggcgaagac
tctgacagcagtgatgtcctcccgctggcccagagagtgcccccagcagggacccctccg
agggctcagggtcctgtttgcgaggccagggagaggccgggcacggcgaccccacaaacg
ccaatgccctcttactccaccatggtgaccccggagctgaagaaggagttgagaaggttt
ggagtccgagcgcttcccaagcggcagatggtgctgaagctgaaagaaatcttccagttt
actcaccagcaagtgggattggacgccaaggaagaggctgcctcttgctccccacaggcc
ctgtccccgagagctccaccccgggctcttcccaagcaggcagctggatccgtccagcct
tctcacttgccccaagggggcctgctccatcttcgggatccaagtcctggaggccaggcc
aggccaggccggtgccgtttgcaggttgggccagatgcacagtctttttctgcagcgggg
cttcgccttggaagcgcccctgagaatagccggacatctctcgcagtgtctcaaggccca
accagttccctggcaagggacagcaagaggtctgtggcttcggagaggtcttcttcgttt
gtgtgtgaggcccacagcgccctgggggcagtgagagaggctgaagaagcagagcacctc
ccagcctctcaggcttcctcgggcctcgagacagacaaactggaggccctgcagcgctac
cttcacgccacccctgctcttggccgccagatcttgctgtaccaacccattgagctggct
gggttgcaggcaaagctgaaggagcagggcatccggattgctctgggcaagctgctggac
ttcctggacactcagtgcatcacttttaccacggcagaagctcggaaagagaaaagaacc
ccccaaaaggggaggcgacgctgctga
DBGET
integrated database retrieval system
