Pogona vitticeps (central bearded dragon): 110089144
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Entry
110089144 CDS
T05000
Symbol
TRIM55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110089144 (TRIM55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvt04121
]
110089144 (TRIM55)
Ubiquitin system [BR:
pvt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110089144 (TRIM55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
Sina_RING
DUF3824
GP67
DUF5063
Motif
Other DBs
NCBI-GeneID:
110089144
NCBI-ProteinID:
XP_020667659
UniProt:
A0A6J0VAK8
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSTSLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP
YLPTRGGTTVASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPERKTE
QPICEEHEDEKINIYCLNCEVPTCSMCKVFGAHKDCEVAPLTSVFQRQKSELSDGIAVLV
GSNDRVQGIVTQLEETCKTVEECCKRQKEQLCEKFDYLYSVLEERKSEMTQMITRNQEEK
LERVRSLIKKYADHLEAVSKLVESGIQFMEEPEMAVFLQNAKALLQKISEASKAFQMEKI
ENGYENMSHFTVNLNREEKIIREIDFYREEEEEEEEEEKDVAEGEDLDEVHTESSGEEEE
VSEQTSQQPQQDTVPKDILPISETNLAPPPPSVDAATSLNQGESLVAPTQQPAGLVQAEP
QASGEPTDPLFYPSWYKAQPRQTSNSNTSPGTENRQVGPCIPVEVNVKKAEGPGVATANG
SSAVSGKEANTPTDTSQTGSELSPQGHAEGQLRTNERVDEPARHVFSFSWLNSLNE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctctcttaattataagtctttttccaaagaacagcaaactatggataacttg
gaaaaacagcttatttgtcccatatgcttagagatgtttactaagcctgtggttatccta
ccatgtcaacacaatctctgcagaaaatgtgccagcgatattttccaggcctcgaaccca
tatctaccaaccaggggaggtaccactgtggcttcaggaggtcgattccgctgtccatct
tgcagacatgaagtagttctggacaggcatggagtctatggtcttcagaggaatttgctg
gtagaaaacataattgatatatacaaacaagaatctgccaggcctgaaagaaaaactgag
cagccaatatgtgaagaacatgaagatgagaaaattaatatttattgtctgaattgtgaa
gtacccacgtgttctatgtgcaaagtttttggtgctcataaagattgcgaagttgctccc
ctcacaagtgttttccaaagacaaaagtctgaactcagtgatggcatcgcggtactagtg
ggaagtaatgaccgagtacaaggaatagtaactcagctggaggaaacttgcaaaacagtt
gaggaatgctgcaaaaggcagaaggagcaactgtgtgaaaaatttgattatttgtactct
gtattggaagaaagaaaaagtgagatgacacaaatgatcactaggaaccaagaggagaaa
ctggaacgggttcgatctctgataaaaaaatatgcagaccatttggaggctgtatcaaaa
ctagtggaatcaggcatccaatttatggaagagccagaaatggcagtatttttacagaat
gccaaagcattgcttcaaaaaattagtgaggcctctaaagcatttcaaatggagaaaata
gaaaatggctatgaaaatatgagccacttcacagtcaatctcaacagagaagaaaagatc
ataagggaaattgatttttacagagaggaggaggaggaggaggaagaagaggagaaagat
gtggctgaaggggaagatctggatgaagtacacacagaatcatctggtgaggaagaggaa
gtatctgagcaaacatctcaacaacctcagcaggacactgtgccaaaagatatacttccc
atctctgagactaacctagcaccacctccaccatcagttgatgctgctacttcacttaat
cagggtgaaagtttggtggctcctactcagcaacctgcaggactggtgcaagctgaaccg
caagcaagtggagaaccaacagatcctttgttttatcctagttggtacaaagctcaacca
cgacaaacaagcaattccaatacatccccagggaccgaaaataggcaggtagggccttgc
attcctgtagaggtgaatgtaaagaaggcagaaggtccaggagtagctactgcgaatggg
agttctgctgtgagtggtaaggaagctaacacacctacagatacttcacagactgggtct
gaactatctccacaaggacatgcagaaggacagctgaggaccaatgaaagagttgatgag
ccagctcgtcatgtcttctctttctcctggttgaactcattgaatgaatga
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