Pogona vitticeps (central bearded dragon): 110089185
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Entry
110089185 CDS
T05000
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110089185 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110089185 (EXOSC1)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110089185 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
110089185 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
110089185
NCBI-ProteinID:
XP_020667715
UniProt:
A0A6J0V886
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MAPAQYCVPGERLCSLEEGIPGSGTYTRHGSIFSSLAGCLVKKSENGMLPVISVMRDAES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDVRATEKDKVEVYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGIQMVPVSWCEMQCPSTHGKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgctcagtactgcgtccctggagaaagactgtgcagcttagaggaaggaatc
cctgggagcggcacctatacacgccatggctccatcttttcctctctggctggttgtctt
gtgaagaaaagtgagaatggcatgctccctgtgatctctgtgatgagggatgcagagtct
cagcttctgcctgatgtaggagccacagtgacatgcaaggtttgcagcattaactctcgt
tttgccaaggtacacatcttgtatgttggctcgacaccactgaagtccccgttccgtggg
acaataaggagagaggatgtccgtgcaacagagaaagacaaggtagaggtttacaagagt
ttccgcccaggagacattgttctggccaaagttatatctttaggggatgcacagtccaac
tacttgctgactacagcagagaatgagctgggggtagtggtggctcacagtgaagcaggt
atacagatggtgccagtcagctggtgcgaaatgcagtgccctagtacccatggcaaggag
ctgcgcaaggtagcccgggtacagccccagtttctgcagacatag
DBGET
integrated database retrieval system
