Pogona vitticeps (central bearded dragon): 110089329
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Entry
110089329 CDS
T05000
Symbol
DHX16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110089329 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110089329 (DHX16)
Enzymes [BR:
pvt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110089329 (DHX16)
Spliceosome [BR:
pvt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
110089329 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
Cas3-like_C_2
Flavi_DEAD
AAA_30
SecA_DEAD
nSTAND3
Motif
Other DBs
NCBI-GeneID:
110089329
NCBI-ProteinID:
XP_020667965
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MAGELERWVSGQLHDLLGLSERHVVAFMVGLARRSHPAEDLLARLEETETMTSVICCFFQ
AWKRAASLTEKEDSEDEWDRSERERLQDLEERDAFAERIKRKDKEKTRNILERSDKKAYE
EAQKRLKMVEEDKKFIIPELRKKSRREYLAKREKDKIEDLEAEIADEEYLFSEQELTAFE
RQELEYKRRVRDLAKQYKQAGEQEKMEKSNRYYMPEESRSKKIPDRYEEPQTEDHLAPRD
EQRRWEEDHIGAASLRFGARDASKRHPHKDYEYVLEEDEMIQFVNAVQMQGTTQNKEEKP
QLSEVERKKLSIQEVRHSLPIYPYRADLLAAIAEHQTLIIEGETGSGKTTQIPQYLFEEG
YTEKGMKIGCTQPRRVAAMSVAARVSQEMDVKLGNEVGYSIRFEDCTSERTVLKYMTDGM
LLREFLTEPDLSSYSVIIIDEAHERTLHTDILFGLIKDIARFRPELKVLIASATLDTERF
STFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPQGDILVFLTGQEE
IEACCEMLQDRCRRLGSKIAELLILPIYANLPSDMQAKIFEPTPPGARKVVVATNIAETS
LTIDGIIYVIDPGFCKQKSYNARTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTA
WAYKNEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALG
ALNHLGELTKLGRKMAELPVDPMLSKMILASEQYKCSEQILTIAAMLSVNNAIFYRPKDK
VVHADNARMNFFLPGGDHLVLLNVYNQWVESGYSMQWCYENFIQFRSMRRARDVREQLEG
LMERIEVDITSSEGDYIPVRKAITAGFFYHTSRLTRSGYKTVKHQQTVFIHPNSSLFEEQ
PRWLIYHELVFTTKEFMRQVIEIDSTWLLEVAPHYYKAKELEDASTKKLPKKVGKTREEL
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaactggagcgctgggtctcagggcagcttcacgacctgctggggctcagc
gagcgccatgtggtggccttcatggtgggcctggccaggcgcagccaccccgcggaggac
ctgctcgcccgcctggaagagaccgagaccatgacatctgttatctgttgctttttccaa
gcatggaaacgggctgcctccctcactgagaaggaggactcggaggatgagtgggatcga
agtgagcgagagcgactgcaggacctggaggagcgggacgcctttgcagagcgcatcaag
cgcaaggacaaggagaagacccgtaacatcctggagcgttcggataaaaaggcctatgaa
gaagcccagaagcgattgaagatggtcgaagaggacaagaaattcataattccagagctc
cggaagaagtctcgccgggaatatttggccaaacgggaaaaggacaagatagaagacctg
gaggcagagatagccgatgaggaatacctgttctcggagcaggagctaacagcctttgag
cgacaggagctggaatacaagcgcagggtgcgggacttggcaaagcagtacaagcaagct
ggagagcaggagaagatggagaagagtaatcggtactatatgcctgaggagagtcgcagc
aagaagatcccagatcgctatgaagaaccccagacagaggatcacttggccccacgcgac
gagcagcggcgctgggaggaagaccacatcggggcagcctccctccgcttcggggctcga
gatgccagtaagcgccatcctcacaaagactacgaatatgtgctcgaagaggatgagatg
atccagtttgtgaatgccgtacagatgcagggcacaacgcagaacaaggaggagaaacca
cagctgtcggaggtggagcgcaagaagctgtccatccaggaggtgcgccacagcctgcct
atctacccctaccgtgcagacctgctggctgccattgcagaacatcagacgctcatcatc
gaaggggagaccggctccggcaagaccactcagatcccacagtacttgtttgaagagggc
tacacagagaagggaatgaagattggctgcacccagcctcggcgagtggcggctatgagt
gtcgctgcccgtgtttcccaggaaatggatgtcaagcttggaaatgaagtcggctatagc
atccgttttgaggactgcacctcagaacggacggtactgaagtacatgactgacgggatg
ctgctgagagaattcctcacggagcctgacctgagcagctacagtgtcataatcatagat
gaggcacatgaacgaactctgcacacagacatcttgtttgggctgatcaaggacattgct
cgcttccggcctgagctgaaggtgctgattgccagtgcgacgttggacacagagcgcttc
tccaccttctttgatgacgcgccgatcttccgcattccggggcgccgtttcccagttgac
atcttttacaccaaggctccagaggctgattacttggaggcctgcgtagtatctgtgttg
cagatccacgtcactcagccccaaggagacatccttgtattcctcactggccaggaagaa
atcgaagcgtgttgcgagatgttgcaggaccgctgccgtcgcctgggctccaaaattgct
gagctcctcatcctgcccatctatgcaaacctgccctctgacatgcaggccaagatcttt
gagccaacgcctccaggggccaggaaggtggttgtggcgacaaacattgcagagacatct
ctgaccatcgacggcatcatctacgtgattgaccctgggttttgcaagcagaagagctac
aacgctcgcacaggcatggagtccctcattgtcactccttgttctcgggcatctgccaac
cagcgagctggacgggctggccgtgtggccgcagggaagtgcttccgcctctacaccgcc
tgggcctacaagaatgagatggaagagaccaccgtgccagagattcagaggaccaatttg
ggcaacgttgtgctgcttctcaaaagcttaggcatcaacgatctcatccactttgacttc
atggacccccctccccatgaaactctcgtgctggccctggagcagctctatgccctgggg
gccctcaaccatcttggtgagctcaccaagctgggccggaagatggcagagctccccgtg
gaccccatgctgtccaagatgatcttggcttcagaacaatacaagtgctcagagcagatc
ctcacaattgctgccatgctgtcagtcaacaatgcgattttttaccggcccaaagacaaa
gtggtccatgccgataatgctcgcatgaacttcttccttcctggtggagaccacctggtt
cttctcaatgtttataatcagtgggtggagagtggctactctatgcagtggtgctatgag
aacttcatccagttccgttccatgagacgagcccgggatgtgcgagaacagctggaaggg
ttgatggagcgcattgaagtggacatcacatccagtgagggagactatatccctgtccgc
aaggccatcactgctggattcttttatcacacatcccgcctcacccgtagtggctataag
accgtcaagcatcagcaaaccgtattcatccaccccaacagttcactgtttgaagaacaa
ccgcgctggcttatctatcatgaattggtcttcaccactaaagaattcatgagacaggtc
atcgagattgacagcacatggctgctggaggtggcccctcactactacaaagctaaagag
ctagaagacgcctctaccaagaagctacccaagaaggttgggaagacacgggaggagctg
ggataa
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integrated database retrieval system
