Pogona vitticeps (central bearded dragon): 110090761
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Entry
110090761 CDS
T05000
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt04510
Focal adhesion
pvt04512
ECM-receptor interaction
pvt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110090761 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110090761 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110090761 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvt04147
]
110090761 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
pvt00536
]
110090761 (COL4A1)
Exosome [BR:
pvt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
110090761 (COL4A1)
Glycosaminoglycan binding proteins [BR:
pvt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110090761 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
110090761
NCBI-ProteinID:
XP_020670211
UniProt:
A0A6J0VBJ5
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MGLSFEGPKGDKGERGVMGPPGPQGAASQQQEKGTTIIRGERGDPGERGDPGPPGEPGLN
IKGEKGEPGKHGTWGQPGKDGEDGEKGRAGETGPPGFPGLPGPTGPKGDKGAPGLQGPPG
IVITTGEDEVFGEKGDQGPPGFSGPKGEPGEKGFPGIQGLPGPPGQPSPGIMGAPGFPGE
RGEKGNQGPPGLSLPGPKGRDGFPGPQGLPGPPGPPGKTDGIWDCLPGLPGDPGPPGPPG
QHGFSGETGQKGEKGEGCFTCDLPGLPGPPGPQGFPGEPGIPGSPGAKGDRGIRGNDGIP
GVTGLPGLPGLMGSPGAKGEPGDIFFDSNLKGEKGNPGFPGVPGAPGREGRPGQDGLPGA
PGPKGALGIFGLKGERGPPGISGFPGPRGERGFPGPAGIGPVGPAGDKGEKGVSGIPGAP
GLPGPKGEAGHIISLPGAPGANGVPGPPGIQGIQGDKGDPGLPGRSGPPGEKGLTGPPGI
GFPGLPGPPGFPGQAGPPGVIGEKGDSGPQGLPGAPGLQGQKGEPGIGLPGPKGFPGLQG
QDGLPGTKGEQGLPGIPGEKGFPGVPGQPGSQGDPGPAGLPGLQGSPGVPGIGPPGLPGS
PGQSGPPGPIGPPGIKGERGYPGIPGLDMPGPKGDKGSQGPSGLPGLQGVPGLPGLQGRE
GQPGATGIKGEMGVMGTPGFQGPPGPIGAPGLPGEKGSSGLSGVSGLKGEPGLKGEKGEA
GLPGEPGSMDRVDMEHLKGQKGDQGSKGQQGPEGEKGAQGDPGTSGMPGKDGEPGFPGTA
GPKGDPGTPGFQGEPGYPGQKGLTGEMGLPGPSGEKGVQGLPGEEGRPGFPGAKGVKGEK
GDPGFPGIGFPGVPGEKGEPGRTGSPGTHGEKGEKGVVGIPGIPGSPGAKGQPGLPGSPG
TPGIPGGKGEKGFPGLDGFPGLKGQIGDPGPQGPPGLPGERGEPGYDGIPGSPGAKGDPG
IPGRGLPGLLGAKGERGPKGDVGFPGTPGSPGIPGVKGEPGFIGPQGPPGQPGIPGLPGR
AGAGPKGDRGPQGRPGLQGLPGPQGSPGVPGLAGAKGEKGSSGWAGPAGTPGVKGDRGSQ
GIPGIAGFLGPAGQKGDMGPPGIPGPQGPRGSSGFPGPKGEQGDQGYPGAKGFPGPPGPP
GAFQMLKGEPGIPGPSGPIGPKGLPGPPGPKGQQGVTGPVGLTGPPGIPGFDGTPGQKGE
TGPVGPPGPRGFPGPPGPEGLPGSMGPPGSPSVAHGFLVTRHSQTTDEPSCPSGTRLMFY
GYSLLYIQGNERAHGQDLGTAGSCLRKFSTMPFLFCNINNVCNFASRNDYSYWLSTPEPM
PMSMAPVTGDNIKSFISRCAVCEAPAMVIAVHSQTIQIPPCPESWRSLWIGYSFVMHTSA
GAEGSGQALASPGSCLEEFRSAPFIECHGKGTCNYYANAYSFWLATIERNEMFKKPTPST
LKAGELHSNVSRCQVCMRRT
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgggactgagtttcgaaggaccaaaaggtgataagggtgaacggggtgtcatgggccct
cctggtccccaaggagctgcttcacaacagcaagaaaaagggaccacaatcatacgtgga
gagaggggtgatcctggtgaaaggggtgatccaggtccaccaggagagccaggactgaat
atcaaaggagagaaaggtgaacctggaaaacatggtacatggggacaacccgggaaggat
ggagaagatggtgagaagggaagagcaggagaaacaggcccaccaggatttccaggactt
cctggtccgactggcccaaagggagacaaaggtgccccaggtctacaaggacctccagga
atagttataactacaggggaagatgaggtatttggtgaaaagggggaccaaggtcctcca
ggattctcaggaccaaagggtgaaccaggtgaaaaaggttttccaggtatacaagggcta
ccaggtcctccagggcaacccagtccagggataatgggagcacctggttttcctggagag
agaggagaaaagggtaaccagggtccacctggactttctcttcctgggccaaaaggaaga
gatggatttccaggccctcaaggtttaccggggcctccaggcccacctggaaaaacagat
ggaatctgggattgtctgcctggtctgcctggtgatcccggccctccaggtcctcctggc
cagcatggcttctcaggagaaacgggacagaaaggtgaaaagggtgaaggctgttttacc
tgtgatcttcctggccttcctggaccaccaggcccccaagggtttccaggggaaccaggt
attccaggatcaccaggtgctaaaggtgacagaggcattcgtggtaatgacggcatccct
ggagtaactggacttccaggtttacctggattgatgggaagcccaggagcaaaaggagaa
cctggagatattttctttgactcaaatttaaagggtgaaaagggaaatcctggtttccct
ggagttcccggtgctcccggtagagaaggaagaccaggtcaggatggtttgccaggtgcg
ccaggacctaagggtgcattgggaatatttggattaaaaggagaacgtggcccaccagga
ataagtggtttcccaggaccacgtggagaaagaggctttcctggtcccgccggaattgga
cctgttgggccagctggtgataaaggagagaaaggcgtatcagggatacctggtgcacca
ggactgccaggacccaaaggagaagctggccacattatttccctgcctggtgccccagga
gcaaatggtgttcctggaccccctggaattcaaggcatccaaggtgacaagggagatcca
gggctcccaggaagatctggcccaccaggtgaaaaaggtctgacagggccaccaggaata
gggtttcctggcctaccagggcctccaggttttcctggtcaggcagggccaccaggcgta
attggggagaagggtgattctggtccccaggggttaccaggtgctccagggttacaaggt
caaaagggtgaacctggaataggactcccaggtccaaaaggttttcctggcctacaaggg
caagatgggctccctggaacaaagggtgagcaagggttgcctggtataccaggagaaaaa
ggatttccaggtgtacctggccagccaggatctcaaggtgatcctggtcctgctggattg
ccaggtttacagggctcccctggtgttccaggaataggccccccaggtcttcctggctcc
ccaggacaatctgggcccccaggaccaataggacccccaggaataaaaggagaaaggggc
tacccaggcatccctgggctagatatgccggggccaaaaggagataagggtagtcaagga
ccatcaggactgccaggcttgcaaggggtaccaggcttacctggcctacaaggacgagaa
gggcagccaggtgctacaggaatcaaaggagaaatgggagttatggggactcctggattc
caaggtcctcctggccctataggtgctcctggacttccaggtgaaaaaggcagctcggga
ctttctggagtgtcaggtctcaagggtgaacctggtttaaaaggtgagaagggtgaggcc
ggtttaccaggagaaccaggatccatggatcgtgtagacatggaacacctgaaaggtcaa
aagggagatcagggaagtaaaggacaacagggaccagaaggagaaaagggagctcaaggg
gatcctggcacatcaggaatgccagggaaggatggtgaacctggatttcctggcacagca
gggcccaaaggggatccaggcactccaggattccagggtgaaccaggttatcctggacaa
aaagggctgacaggagaaatgggtctgccaggtccatcaggagaaaaaggtgtgcagggt
cttccaggtgaggaaggtagaccaggatttcctggagcaaaaggagtgaaaggtgaaaaa
ggagaccctggatttcctggaattggtttccctggggttcctggtgagaagggagaacca
ggaaggactggtagtccaggaacacatggagaaaaaggtgaaaagggtgttgtaggaatt
ccaggtatccctggttctccaggtgccaaagggcagccaggtcttcccggttctccaggt
actccaggaatcccaggtggaaaaggtgaaaagggattcccaggcttggatggttttcca
ggtttgaaaggacaaataggtgatcctggaccccaaggtccaccaggccttcctggagaa
agaggtgagccaggttatgatggaatcccaggatcacctggtgcaaagggtgacccaggt
attccgggtagaggacttcctggacttctgggtgcaaagggagaaagaggtccaaaagga
gatgtgggttttccaggaactccaggaagcccaggaattcctggtgtaaaaggagaacca
ggatttattggtccacaaggtccccctggccaaccgggcattcctggattaccaggcaga
gctggagcgggtcctaaaggtgaccgcggaccccaaggtcgacctgggctgcaagggcta
cctgggccccagggatctccaggtgttccagggctagcaggagcaaaaggagaaaaagga
agctcaggttgggcaggaccagctggaacacctggagtgaaaggtgaccgaggatctcaa
ggaatccctggcattgctggcttccttggacctgctggtcaaaagggagacatgggacct
cctgggattccaggtcctcaaggtccaagaggttcttcaggattccctggacccaaggga
gaacaaggtgatcaagggtatccaggagcaaaaggctttccaggtcctccaggtcctcca
ggagctttccaaatgttgaaaggtgaaccaggcatacctggcccttcaggcccaattggc
cccaaaggacttcctggtcctccaggaccaaaaggacagcaaggtgtcacaggacctgtt
ggtttgactggtccacctggtatcccaggatttgacggaacgcctggccagaaaggagaa
acaggccctgttggacccccaggtcctagaggctttccaggtccacctggtcctgaaggt
ttgccggggtcaatgggtccaccaggtagtccctcggtagctcatggtttccttgtgacc
aggcacagccagaccactgatgagccatcatgtccttctgggacaagactaatgttctat
ggatattctttgctttatatacaaggaaatgaacgggcccatggccaggacttgggtaca
gcaggaagctgcctacgtaaattcagcacaatgcctttcctgttctgtaacattaacaat
gtctgtaattttgcctcaaggaatgattattcttactggttgtctactcctgagccaatg
ccaatgagcatggctcccgttacaggagataacataaagtctttcatcagtaggtgtgct
gtatgtgaagctcctgccatggtgattgcagttcacagtcaaaccattcaaattccaccg
tgtccagagagctggagatccctgtggataggctattcctttgtgatgcatacaagtgct
ggagcagagggttcagggcaagctctagcatctccgggatcctgtcttgaagaattccgc
agtgctccattcattgagtgtcatggcaagggcacctgcaactactatgctaatgcttac
agcttctggcttgcaactattgagagaaatgaaatgttcaaaaaacctactccttcaaca
ctgaaagcaggagaactacactcaaatgttagccgttgccaagtctgtatgaggagaaca
taa
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