KEGG   Phaseolus vulgaris (common bean): 137806001
Entry
137806001         CDS       T03093                                 
Name
(RefSeq) THO complex subunit 4B-like
  KO
K12881  THO complex subunit 4
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03013  Nucleocytoplasmic transport
pvu03015  mRNA surveillance pathway
pvu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137806001
  09122 Translation
   03013 Nucleocytoplasmic transport
    137806001
   03015 mRNA surveillance pathway
    137806001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137806001
   03041 Spliceosome [BR:pvu03041]
    137806001
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     137806001
    TREX complex
     137806001
Spliceosome [BR:pvu03041]
 Complex C
  Other components
   EJC/TREX
    137806001
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137806001
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 137806001
NCBI-ProteinID: XP_068462013
LinkDB
Position
11:complement(5900092..5904221)
AA seq 234 aa
MYAALDLTLDDIIKNNKKSGSGNFRGQNRSSGSGPGPSRRFPSRVANRAAPYAAANADAT
WKHNLYADQYVAAAGYSARGGFASSIETGTKLFISNLDYGVSNDDIKELFSEVGDMKRHG
VHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIAGANISTPGVPRSGQG
RNGALRKPGGRGQGMQRDRGQGRGHGGGRRDDKLSADDLDADLEKYHAEAMQLN
NT seq 705 nt   +upstreamnt  +downstreamnt
atgtatgcagccctggatttgactctcgatgacataatcaagaacaacaagaaatctgga
tccggaaacttccgtggtcagaaccgatcatccggatccggacccggaccttcacgccgc
ttccccagccgtgttgccaaccgcgccgctccttatgccgccgccaacgccgacgcgact
tggaagcacaatttatacgcagatcagtacgtggctgcggcggggtactctgctcgaggt
ggttttgcgtcttctattgaaactgggaccaaacttttcatttctaacttggattatggt
gtttccaatgacgatattaaggaattgttttctgaagttggtgacatgaaacggcacggg
gttcattacgacaggagtggaagatcgaagggtacagcagaagtagtattttcacgacga
gctgatgctgtagctgctgtgaagagatacaacaatgttcaattagatggcaaaccaatg
aagatagagattgcgggagcaaacatttctacccctggtgttcctcgaagtggacaagga
agaaatggggcattaagaaagccaggaggaagggggcaaggcatgcaaagggatcgaggt
caaggaagaggtcacggtggaggaagacgtgacgataaattatctgcagatgatctggat
gctgatctggagaagtatcacgccgaggcaatgcaattgaactga

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