Phaseolus vulgaris (common bean): 137806001
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Entry
137806001 CDS
T03093
Name
(RefSeq) THO complex subunit 4B-like
KO
K12881
THO complex subunit 4
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03013
Nucleocytoplasmic transport
pvu03015
mRNA surveillance pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137806001
09122 Translation
03013 Nucleocytoplasmic transport
137806001
03015 mRNA surveillance pathway
137806001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137806001
03041 Spliceosome [BR:
pvu03041
]
137806001
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137806001
TREX complex
137806001
Spliceosome [BR:
pvu03041
]
Complex C
Other components
EJC/TREX
137806001
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137806001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
137806001
NCBI-ProteinID:
XP_068462013
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All DBs
Position
11:complement(5900092..5904221)
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AA seq
234 aa
AA seq
DB search
MYAALDLTLDDIIKNNKKSGSGNFRGQNRSSGSGPGPSRRFPSRVANRAAPYAAANADAT
WKHNLYADQYVAAAGYSARGGFASSIETGTKLFISNLDYGVSNDDIKELFSEVGDMKRHG
VHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIAGANISTPGVPRSGQG
RNGALRKPGGRGQGMQRDRGQGRGHGGGRRDDKLSADDLDADLEKYHAEAMQLN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagccctggatttgactctcgatgacataatcaagaacaacaagaaatctgga
tccggaaacttccgtggtcagaaccgatcatccggatccggacccggaccttcacgccgc
ttccccagccgtgttgccaaccgcgccgctccttatgccgccgccaacgccgacgcgact
tggaagcacaatttatacgcagatcagtacgtggctgcggcggggtactctgctcgaggt
ggttttgcgtcttctattgaaactgggaccaaacttttcatttctaacttggattatggt
gtttccaatgacgatattaaggaattgttttctgaagttggtgacatgaaacggcacggg
gttcattacgacaggagtggaagatcgaagggtacagcagaagtagtattttcacgacga
gctgatgctgtagctgctgtgaagagatacaacaatgttcaattagatggcaaaccaatg
aagatagagattgcgggagcaaacatttctacccctggtgttcctcgaagtggacaagga
agaaatggggcattaagaaagccaggaggaagggggcaaggcatgcaaagggatcgaggt
caaggaagaggtcacggtggaggaagacgtgacgataaattatctgcagatgatctggat
gctgatctggagaagtatcacgccgaggcaatgcaattgaactga
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