Phaseolus vulgaris (common bean): 137807153
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Entry
137807153 CDS
T03093
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137807153
03041 Spliceosome [BR:
pvu03041
]
137807153
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
137807153
Spliceosome [BR:
pvu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
137807153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_8
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
137807153
NCBI-ProteinID:
XP_068463734
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All DBs
Position
3:complement(32298060..32302750)
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AA seq
411 aa
AA seq
DB search
MQQQRLRQHAMMQPSLYHHPALLTPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP
LLQELFSAAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWAYA
SSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR
NQQDAQSAINDLTGKWLGSRQIRCNWATKGASSSDEKQSLDSKSVVELTNGTSEEGQEIT
NDDAPEKNPQYTTVYVGNLALQVTSVDLHHHFHSLGAGTIEDVRVQRDKGFGFVRYSTHA
EAALAIQMGNARILFGKPIKCSWGSKPTPPGTASTPLPPPTSANMPGFSLASLAAYERQM
ALSKMGGAHALLHQQGQHALKQVAMGMGAPGAGYDARFQNVATTQHLMYYQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacagaggttaagacagcatgccatgatgcaaccctctctctaccaccacccc
gctctccttactcctcctcagatagagcctatcttgagtggaaatctgccacctggcttt
gattcgagtacttgccgcagtgtttatgtcggcaacattcatccccaggttacagaaccc
cttcttcaagagcttttttcggctgcaggcgcccttgaaggatgcaaactcattaggaaa
gagaagtcatcctatggttttgtggactactttgatcgcagttctgctgcatttgctatt
gtaactctcaatggaaggaatatttttgggcagcctattaaggttaactgggcttatgct
agcagccagagagaggatacctcaggtcactttaatatttttgttggtgacctcagtcct
gaggtcacagatgcgacattgtatgcttgcttctctgtatatcctagttgttctgatgca
agggtaatgtgggatcagaagacaggccgttccaggggatttggatttgtttcttttcgg
aatcagcaggatgctcaaagtgctataaatgatttgactggaaaatggcttggaagtaga
cagattcgttgtaattgggcaaccaaaggggccagttcaagtgatgaaaagcagagtttg
gattccaaaagtgtcgtggagttgactaatggaacgtcagaagaaggtcaggaaataacc
aatgatgacgctcctgagaagaatcctcaatataccactgtttatgttggcaatcttgct
ctgcaggtcacttctgttgatctccatcaccattttcattctcttggtgccggaactatt
gaagatgttagggtgcaacgagacaaaggttttgggtttgtgagatatagtacccatgct
gaagcagctcttgctatacagatgggtaatgctcgaattctctttggcaaacctatcaag
tgttcatggggtagcaaacctactcctccaggaacagcctctactcctcttcccccacct
acttctgcaaatatgccgggcttttctcttgctagtcttgcagcatatgaacgccaaatg
gctttgagtaaaatgggtggtgcacatgcccttctgcatcagcaaggacaacatgcccta
aaacaggtagccatgggaatgggtgctccaggggctggttatgatgcaaggtttcagaat
gttgcgaccacccagcaccttatgtactatcagtaa
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