Phaseolus vulgaris (common bean): 137807650
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Entry
137807650 CDS
T03093
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137807650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137807650
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137807650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
137807650
NCBI-ProteinID:
XP_068464490
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Position
3:complement(40021401..40030542)
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AA seq
942 aa
AA seq
DB search
MAENFHDLTNKLPDLKLDPKQAQGFLSFFKTLPDDPRAVRLFDRRDYYTAHGDNATFIAK
TYYHTTTAMRQLGNGSNALSSVSVSKNMFETIARDLLLDRTVHSLELYEGSGSNWRLVKS
GTPGNIGSFEEVLFANSEMQDSPVIVALSLNFRENGCTIGLGFVDLTKRVLGMADFLDDS
HFTNVESALVALGCKECLLPIECAKSTENRMLRDMLTKCGVMLTEKKKSEFKARDLVQDL
GRLVKGPIEPVRDFVSGFEFATGALGALLSYAELLADESNYENYTLRRYNLDSYMRLDSA
AMRALNVLESKTDANKNFSLFGLLNRTCTAGMGKRLLHIWLKQPLVDVAEINTRLDIVQA
FVEDTVLRHDLRQHLKRISDIERLIHNLQKRRAGLQHIVKLYQSSIRLPYIKSALEIYDG
QFSSVMRSRYLEPLELWTDDEHLNKFTGLVEASVDLDQLENREYMISASYDSTLANLKAQ
QELLEFQIQNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVL
ETRKDGVKFTNTKLKKLGDKYLQILEEYKSCQKKLVDKVVQTATTFSEVFESLAEIISEL
DVLLSFADLASSSPTPYTRPDITTSDEGDIILEGCRHPCVEAQDWVNFIPNDCKLVRGKT
WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGATEKSLIIIDELGRGTSTNDGFGLAWAICEHIVEVIKAPTLFAT
HFHELTALALENVNNNPEKQIVGVANYHVSALIDSSTRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVTLAREKAAELEDFSLPGASLTDTTQEVGSKRKRVFESDDMARGSARARQF
LEAFVALPLETMDKMQVLQEVRKLTDTLEKDAENCNWLQQFL
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacttccacgacctaaccaataaactccccgacctcaaattagatcctaag
caagcgcaagggtttttatcatttttcaaaaccctacctgatgatccaagggctgtacgg
ctttttgatcgcagggactattatactgcccatggcgacaatgcaacttttattgcaaag
acctactaccacactactactgccatgagacaactgggcaatggatcaaatgctctttcc
agtgttagtgtcagcaagaacatgtttgaaacaattgctcgggatctccttttggataga
acagtccactctcttgagctctatgaaggtagtggttctaattggaggctggtcaaaagt
ggaacgcctggtaatattggtagttttgaagaagttctgtttgctaacagtgaaatgcaa
gattcccctgttattgttgctttgtcacttaacttccgtgaaaatggttgcaccattggg
ttaggatttgttgatctaactaagagagtacttggtatggctgatttccttgatgacagt
cacttcacaaatgtggagtcagcattggttgcacttggctgtaaagagtgtcttctgccc
atagagtgtgccaaatctactgaaaacagaatgttgcgtgatatgttgactaaatgtggt
gtaatgttaactgagaaaaagaaatctgaatttaaagccagggatctggtgcaggatctt
ggcaggcttgttaaaggtcctattgaaccagttcgagatttcgtgtctggatttgaattt
gcaactggtgctctgggggcattactatcttatgcagagttactggcagatgaaagcaat
tatgaaaactatacccttcgtaggtacaatcttgacagctatatgaggttagattctgca
gccatgagagcacttaatgtcctagaaagcaaaactgatgcaaacaaaaatttcagtttg
tttggtcttctgaataggacttgtactgctggaatgggaaaacggttattgcacatctgg
cttaaacagccgttagtagatgtggcagaaattaacactagactggacatagtacaagct
tttgtagaggacactgtgcttcgccatgatctgaggcagcatctgaaaagaatatcagac
attgagcgactgatacacaatctgcagaagcgacgagctggtctgcaacatattgttaaa
ctttatcagtcaagtattagactaccttacattaaaagtgctttggaaatatatgatggg
caattttcttcagtgatgaggagtaggtatttggaacctcttgagttatggactgatgat
gagcacctgaacaaattcactgggcttgtagaagcttctgttgaccttgatcaactggag
aacagggaatacatgatttctgcaagctatgactctacactagctaacctaaaggcacag
caagaattactagagttccaaatacaaaacttgcatagacaaactgctgatgatcttgat
ctgcctatagataaggcattaaaattagacaagggcacacaatttggacatgttttcaga
atcacaaagaaggaagagccaaagataaggaagaagctcaatacccagtttattgtactg
gaaacccgtaaagatggggtgaaatttaccaacacgaagctcaaaaaactaggggataaa
tatctgcaaattcttgaggagtacaaaagttgtcaaaagaagttagttgataaggtagtt
caaactgcgacaactttttctgaggtgtttgagtctttagcggaaataatttctgaattg
gatgtattactaagctttgctgatttggcttctagttcgcctactccctacacaaggcct
gatatcactacatcggacgaaggagatataattttagaaggctgtagacacccttgtgtg
gaagcccaagactgggtgaattttataccaaatgactgtaagcttgtcagaggaaaaact
tggtttcaaataataacgggacctaacatgggtggtaaatcaacattcatccggcaggtg
ggtgtgaatattttgatggcacaagttggttcatttgttccttgtgacaaagctagcata
tctgttcgtgattgtatttttgcccgtgtgggtgctggtgactgccaactacgtggtgtt
tctaccttcatgcaagaaatgcttgaaactgcgtcaatattaaaaggagccactgaaaag
tccttgataatcattgatgagttggggcgtgggacatcaactaatgatggatttggtcta
gcttgggccatttgtgagcatattgttgaagttatcaaagcacctactttgtttgccacc
cactttcacgaactgactgctttagcccttgaaaatgtaaacaacaatccagagaagcaa
attgttggcgtggcaaactatcatgttagtgctcttattgactcgtcaactcgaaagcta
actatgctatacaaggttgaacctggagcttgtgatcagagttttggtattcatgttgcc
gagtttgctaacttccctgaaagtgttgttaccctagctagggagaaggcggcagaatta
gaagatttttctctccctggagcgtccttaactgatactacacaggaggtgggttctaaa
cgtaagagagtttttgaatccgatgacatggctcgagggtctgcaagggctcggcaattt
ctcgaagcatttgttgctttgccactagagaccatggacaaaatgcaagtgttgcaagaa
gtaaggaagttaacagatactttggagaaggatgccgaaaactgtaattggctgcaacaa
ttcttgtag
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