Phaseolus vulgaris (common bean): 137807652
Help
Entry
137807652 CDS
T03093
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137807652
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvu01002
]
137807652
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvu03021
]
137807652
03036 Chromosome and associated proteins [BR:
pvu03036
]
137807652
Peptidases and inhibitors [BR:
pvu01002
]
Metallo peptidases
Family M1
137807652
Transcription machinery [BR:
pvu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137807652
Coactivators
SAGA/TFTC/STAGA complex
137807652
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
137807652
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF2_3rd
TPR_TAF2_C
Peptidase_M1
HEAT_2
Peptidase_M1_N
Phage_T7_kinase
Motif
Other DBs
NCBI-GeneID:
137807652
NCBI-ProteinID:
XP_068464492
LinkDB
All DBs
Position
3:complement(40063871..40087410)
Genome browser
AA seq
1382 aa
AA seq
DB search
MAKPRKPKNNEDPKPENSGALVHHQKLCLSIDIDKRLVHGYTELEIAVPEIGIVGLHAEN
LGIESVWVDGEPTEFEYYPHQQQQVGDDKRFSSVCSPSSAADAAVSVYMSSLEKELVPNL
LINCCKPTKAESEQQPEQPVPENGFHSSAEPKQNVRIVRIDYWIEKAETGIHFRNNLLHT
DNQIRRARCWFPCIDDNSQRCCYDLEFTVSHNLVAVSTGFLLYQVLSKDNPPRKTYVYKL
DVPVAARWISLAVAPFEILPDHQFSLISHMCLMPNLSKMRNTVEFFHSAFSCYKDYLSVD
FPFDSYTQVFIEPEMAVSSMSLGASVSIFSSQVLFDDKVIDQTIDTRVKLAYALARQWFG
VYITPEAPNDEWLLDGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCS
ASCKDLYGTQFIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTL
STKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTAL
QTSTTSSLDINPDTENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSK
LAARRFQKPKKGLKHDGSDDNGDVPSMDVRSNTESPLLWIRADPDMEYLAEVHFNQPVQM
WINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSA
SEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADRKSP
REAIEFVLQLLKYNDNNGNPYSDVFWLSALVQSVGELEFGQQSILLLSSLLKRIDRLLQF
DSLMPIYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKTLWQVRIEASRALL
DLEFHCKGMDSALLLFIKYLEEENSLRGQLKLATHVMRLCQMRDGLNSDEEITSQTLVSM
LNLLEGRTAFNNVFLRHYLFCILQIIARRPPTLHGIPRENRTLHMSLTEACNYQKNIFVL
DSDSKPLDLPSSTQNPTPNLGLDGLSDALYEASKDQPTEAPPQEHIEALLKEATLEKAEE
GFTEIPQEAPMEVPIEVSKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQVVERSLGG
RNEMDHGASSSVSVDAPQRNFAETLSISNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDE
LVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNVDADARRYASLQTLSVARFDPDGESLG
KEISARGKEKHKSKEKKRKRESNKDHDDPEYLERKRLKKEKKRREKEMAKLQSDEAKRSS
VDLSSKKEEALVDVARQVKSVEPSGFNSKLETKKIDIKPDPSEGTSTGPKIRIKIKNRML
NK
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctcgcaagcccaagaataacgaagaccccaagcccgaaaactctggtgcc
ctagttcaccaccaaaagctatgcctctcaatcgacatcgacaaacgcctagtccacggg
tacactgaattggagattgcggtgccggagattgggatcgtagggttgcatgcggagaat
ttagggattgagagtgtttgggtcgatggtgagcccacggagttcgagtattacccgcat
cagcagcagcaggtgggagatgataagaggtttagttctgtgtgttctcctagctctgct
gccgatgctgctgtctcagtgtacatgtcctctctggagaaggagctggtgcccaattta
ctcattaactgctgtaaacctaccaaggctgaaagtgaacagcagccggagcaaccagtt
cccgagaacgggtttcactcctcggccgagcccaaacagaatgtgagaattgttcgtatt
gactattggatagaaaaggcagagacaggaatccacttcagaaataatcttcttcatact
gataatcagataaggagagcaagatgttggttcccctgtatagatgacaattcacaacga
tgctgctatgacctggagttcacagtatcacacaatcttgtggctgttagtacgggattc
ttgctttatcaggtcttaagcaaggacaatcctcctcggaaaacatatgtctataaattg
gatgttccagttgctgcaaggtggatatctttggctgttgccccatttgaaattcttcct
gatcaccaatttagtctcatatcacacatgtgtttgatgcctaatctatcaaagatgcgg
aatacagtggaatttttccatagtgccttcagctgctataaggattatctttctgtagac
ttcccatttgactcatatacgcaagttttcatagagccagagatggctgtgtcttcaatg
agtttaggagcctctgtgagtatatttagttcacaagttttgtttgatgacaaggttatt
gaccagactattgacacacgggtaaaacttgcatatgctcttgcaagacagtggtttggg
gtgtatatcactcctgaggcaccaaatgatgagtggctcttggatggacttgctggcttc
ttgacagatttttatatcaagaaacatttgggaaataatgaggcacggtaccggagatac
aaggcaaattgtgctgtttgcaaagttgataatggtggagcgacagctttgagctgttca
gcttcctgcaaagatttatatggaactcagtttattgggttgtatggaaaaataagatct
tggaagtctgtggctgttcttcagatgttggaaaagcaaatgggtcctgaatctttccgt
agaattttacaaacaatagtttcacgggctcaagataaaacgcgttccatgaagactcta
agtactaaggagtttcgacattttgccaataaggttgggaatcttgaacgtccatttctt
aaggatttctttccacggtgggttggttcttgtggatgtcccgttctaaggatggggttt
tcctataacaaaaggaagaatatggttgaattggctgtgttgcgaggatgtacagcattg
cagacttcaactacatccagtcttgatattaatcctgatacagaaaatcgagatggagat
actggatggcctggtatgatgagcatcagggtatatgaacttgatggtatgtatgaccat
ccaattctgccaatggctggagaagcatggcagctattggaaatacaatgccactcaaag
cttgctgctagacgctttcagaagcccaagaaaggattaaaacatgatggatctgatgat
aatggtgacgtgccttccatggacgtgcggtcaaataccgagtcgcctttattatggatc
agagcagatcctgatatggagtaccttgctgaggttcattttaaccaaccagttcagatg
tggatcaatcaattagagaaggacaaagatgttattgcccaggcacaagcaattgcagcc
cttgaggcatcaccacaactatcattttcaattgtaaatgccctaaacaattttctcagt
gactccaaggccttttggagagtacggattgaagcggcatttgcattggcaaattctgca
tctgaggaaactgatttttctggtctactccatttggtgaaattttacaagagtaggagg
tttgatcctgacattggactcccaaagccaaatgattttcacgattttgccgagtatttt
gttcttgaggctattccacatgctgttgccatggttagagccgctgacaggaaaagccca
agagaagctattgagtttgttctacagctattgaagtacaatgacaacaatgggaatccc
tactcagatgtcttctggctttctgcattagtccaatcagttggtgagcttgagtttggg
caacagagtattctcctgttgtcatcacttctcaaacgcattgaccggcttctacaattt
gatagtctcatgccaatatacaatggaatcctgactatcagttgtatccgaacattgacc
cagattgctttaaagctttcggggttcattcctcttgatcgagtttatgaacttgtaaag
ccttttcgtgacttgaagacactgtggcaagttcgaattgaagcaagtagagcactcctt
gatcttgaattccactgcaagggcatggattcagcattgcttttatttatcaagtactta
gaggaggagaattccttaagagggcagttaaagctagccacccatgttatgaggctatgt
cagatgagggatggattgaattcagatgaggaaattacaagccaaactctagtctctatg
cttaatttactggaagggcgtactgcatttaataatgtctttctccggcattatctgttc
tgcatactacaaataattgctagaagaccaccaactcttcatgggattcccagggaaaat
agaacgttgcatatgagtcttacagaagcttgtaactatcagaagaacatttttgttctt
gattcggatagtaaacctttggatctgccaagctctacccaaaaccctacaccaaatctt
ggcctggatggtttgagcgatgcactttacgaagcttctaaggaccaacctactgaagct
ccaccgcaggagcacattgaagctcttctaaaggaagcgaccctagagaaagctgaagag
ggatttactgaaattccacaggaagcaccaatggaagttccaattgaagtttccaaggaa
gcagatactgtatcgaatagccatgaaagaaagaggctcattaaaataaaggtcaaacaa
tcttctgctaccagtagggctgatactgataatcaagtggttgaacgttctttaggtggt
cgtaatgaaatggatcatggagctagcagttcagtttctgtagatgcaccgcagaggaat
tttgccgagactcttagcatcagtaatcacaatatagatgaagttaattcttggcatgat
cgtggttcgcgcatgactgctagcattggtagtgctaaatttttgagtgacggtgatgaa
ttggtcaaagaacttcagtgcactgctgattcaagtatagtttattcacaacctcagcct
gaagatccgtcatcgtccagtattatccaggataacaatgtagatgcggatgcacgacga
tatgccagccttcaaactctttcagttgcaagatttgatcctgatggagaatcgttaggt
aaagaaatttctgctcgtggcaaggaaaagcacaaaagcaaggaaaagaaacgaaaacgg
gaaagtaataaagaccatgatgatccagaatatttggagcgaaaacgattaaagaaggag
aaaaaacgacgggaaaaagaaatggcaaaacttcagagtgatgaagcgaagagatcctct
gtagacttgtcgagtaagaaagaggaagctttagtggacgttgctagacaggttaaatct
gttgagcccagcggatttaattctaaattagaaaccaaaaagattgatatcaaaccggat
ccatctgaaggcacatctactggtccaaaaattcgaattaaaattaaaaaccgaatgctc
aacaagtga
DBGET
integrated database retrieval system
