Phaseolus vulgaris (common bean): 137807911
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Entry
137807911 CDS
T03093
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137807911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137807911
03009 Ribosome biogenesis [BR:
pvu03009
]
137807911
Enzymes [BR:
pvu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137807911
Spliceosome [BR:
pvu03041
]
Complex A
U1 snRNP components
U1 related factors
137807911
Complex B
137807911
Ribosome biogenesis [BR:
pvu03009
]
Eukaryotic type
Pre-60S particles
Helicases
137807911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
137807911
NCBI-ProteinID:
XP_068464863
LinkDB
All DBs
Position
3:complement(43043299..43050657)
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AA seq
603 aa
AA seq
DB search
MNPYENRYSDSASFHGRRSDFVRSIPPPSFGGRGDAVPYGAFRPNGFGSAPLAPIPSFVP
PPGGFSVGRGSARVGNGHMSDRKYDIGRSGGGRGRGGGRGGAQGFRGSRRGGRHDGGSSR
DDLNNITLPKQSFRNLVPFEKNFYVECPAVRAMTEQEVTHYRACREITVQGHDVPKPVRM
FHEANFPDYCLEVIANLGFAEPTPIQAQGWPMAMKGRDLIGIAETGSGKTLAYLLPALVH
VNAQPRLSHGDGPIVLVLAPTRELAIQIQEEALKFGSRTNCRSTCIYGGAPKGPQIRELR
RGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQT
LLWSATWPREVETLSRQFLRNPYKVIVGSPNLKANQSINQVVEVVTDMEKYNRLIRLLKE
VMDGSRVLIFMETKKGCDQVTRQMRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTA
TDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAYTFFTHGNAKFARDLI
KILQDAGQVVSPALSALVRSAGSGQFGSGGSFRTRGRGGYGNRGLTSGSNAIPLGSKRPW
QYL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttacgagaatagatactctgattccgcttcttttcatggtcgtcgcagtgat
ttcgttagatctattcctccgccgtcttttggcggtcgcggcgatgcggttccctacggc
gcctttagacccaacgggttcggatccgcaccccttgctccgattccatcatttgtgccc
cctcctggggggtttagcgtaggacgaggtagtgctagagtgggcaatggtcacatgagt
gatagaaaatacgacataggtcgtagcggcggtggaagaggtcgtggtggtggtagaggc
ggggctcaaggttttaggggctccaggagaggaggtagacacgatggtggttcttctagg
gacgatttgaacaacattacacttccgaagcagagttttaggaatttggtcccttttgag
aagaatttttacgttgagtgccctgcggtgagagccatgactgagcaagaagttacgcat
taccgtgcttgtagagagatcaccgtgcaagggcatgatgtgccgaaacctgtacggatg
tttcacgaggcgaattttcctgattattgccttgaggtcattgccaatctgggttttgct
gagcccactccaattcaggctcagggttggcctatggcaatgaagggtagagatttaatt
ggcattgctgagactggctcgggtaaaactttggcgtatttgcttcctgctttagtgcac
gtcaatgctcaacctcgactgtcacatggtgatggtcccattgtcttagtattagcaccg
acaagagagcttgctattcaaattcaagaagaggctctgaaatttgggtcacgaacaaat
tgtagaagtacgtgcatctatggtggtgcaccaaagggcccccaaattcgtgagctaaga
agaggcgttgagattgttattgctacacctggtcgtctaatagatatgttggaagctcag
cacacaaaccttcaaagagtgacttaccttgtcttggatgaagctgatcgaatgctggac
atgggttttgaacctcagatacggaaaattgtaggccagattcgaccagatagacaaaca
ttattatggagtgctacatggccaagggaggttgagactctgtcaaggcagtttctccgc
aatccatacaaggtaattgttgggtcaccaaacctgaaggcaaatcaatctataaatcaa
gttgttgaagttgtaacagacatggagaaatataatagattaatcagactgctgaaagaa
gtgatggacgggagccgagttctaatatttatggagactaaaaagggatgtgatcaagtt
acgagacaaatgagaatggatgggtggccagcactatccatccatggtgataaaaaccag
gctgagagggattgggtcttggctgaatttaagagtggcagaagtccaataatgactgcc
actgatgttgctgcacggggtcttgatgtgaaggacattaaatgtgtgatcaattatgat
tttccatcaagcctggaagattatgtacacagaattggtcgaactggtcgtgcaggggcc
aaaggaactgcgtacacattttttacacacggcaatgccaagtttgctagggatctgatc
aagattttacaagatgctggtcaggttgtgagtcctgcattgtctgcattggttcggtca
gctggttctggtcaatttggatcagggggaagttttcgcacaagaggacgcggaggctat
ggaaatcgaggtttaacatcaggttccaatgccattcctctaggttcgaagaggccttgg
cagtatctatag
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