KEGG   Phaseolus vulgaris (common bean): 137807975
Entry
137807975         CDS       T03093                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03030  DNA replication
pvu03410  Base excision repair
pvu03420  Nucleotide excision repair
pvu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137807975
   03410 Base excision repair
    137807975
   03420 Nucleotide excision repair
    137807975
   03430 Mismatch repair
    137807975
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvu03032]
    137807975
   03036 Chromosome and associated proteins [BR:pvu03036]
    137807975
   03400 DNA repair and recombination proteins [BR:pvu03400]
    137807975
DNA replication proteins [BR:pvu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137807975
  DNA Replication Termination Factors
   ELG1-RFC complex
    137807975
Chromosome and associated proteins [BR:pvu03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137807975
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137807975
  Check point factors
   HRAD17(Rad24)-RFC complex
    137807975
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 Rad17 Mg_chelatase AAA_lid_RFC1 AAA_16 RCF1-5-like_lid Viral_helicase1 RuvB_N AAA_11 nSTAND3 AAA_19 AAA_assoc_2 AAA_5 AAA_28 DNAX_ATPase_lid ABC_tran AAA_25 AAA_30 AAA_24 IstB_IS21 DNA_pol3_gamma3 RNA_helicase AAA_18 NTPase_1 DUF8076 bpMoxR MeaB DO-GTPase1 AAA_3 AAA_29 NPHP3_N
Other DBs
NCBI-GeneID: 137807975
NCBI-ProteinID: XP_068464957
LinkDB
Position
3:43796326..43799708
AA seq 330 aa
MSSSSASNTYDVPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
SILALAHELLGPNCKEGVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEAD
SMTTGAQQALRRTMEIYSNSTRFALACNTSAKIIEPIQSRCAIVRFSRLLDQEILGRLMI
VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHVK
NMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAH
MRICDGVGSYLQLCGLLAKLSLVRENAKAV
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtcatcatcttcagcaagcaacacctatgacgtgccatgggtggagaagtatcgtccc
aacaaggtcgctgacatagtcggcaacgaggacgcagtctctagactgcaagtcattgct
cgcgatggcaacatgcccaatctcatattatcaggtcctcctgggaccggaaaaaccact
agcatactagccctcgctcatgagcttcttggaccaaattgcaaggaaggtgttcttgaa
ctcaatgcatccgatgatagaggaattgatgttgtgaggaacaagatcaagatgtttgct
cagaagaaagtgacccttcccccagggaggcacaagatagtaatactggatgaagctgat
agtatgaccacaggggcacaacaagcactgagaaggacaatggagatatattctaactct
actcgttttgctcttgcttgcaatacttcagctaagattattgagcccattcagagtaga
tgtgccatagtgcggttttcacggttgttagatcaagagatacttggtcgactcatgatt
gtggttcaagcggaaaaggttccctacgttcctgaaggacttgaagccatcattttcact
gccgatggtgatatgaggcaggcattgaataacttgcaagcaacatacagtgggttccaa
tttgttaaccaagcaaatgtttttaaggtttgcgaccagccacatccactgcatgtgaag
aatatggtgcgtaatgtgattgaagggaactttgatgaggcttgttcgggcctcaagcaa
ctgtatgatttaggatattctcccactgatatcatcacgactctttttcgtatcataaaa
aactatgatatggctgagtatctgaaattggagttcatgaaggaaactgggtttgctcat
atgagaatttgtgatggagttggatcttatcttcaattgtgtggtttattggctaagctt
tccctagttcgagagaatgctaaagctgtatga

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